Gene annotation
Transcriptome id Sobic.006G234466.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFE4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
2 Sobic.001G342400 SPX domain-3("PubMedID : 26759170,PubMedID : 24597475")@SPX domain-containing protein, putative, expressed -
3 Sobic.001G504100 - -
4 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.006G050800 expressed protein -
6 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.008G009400 - -
8 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
9 Sobic.001G234900 inorganic phosphate transporter, putative, expressed K08176: MFS transporter, PHS family, inorganic phosphate transporter
10 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
11 Sobic.002G391800 peroxidase, putative, expressed K00430: peroxidase
12 Sobic.002G351300 expressed protein -
13 Sobic.001G242100 expressed protein -
14 Sobic.010G009900 - -
15 Sobic.006G096000 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.006G255400 glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
17 Sobic.008G002800 fatty acid desaturase, putative, expressed K10257: FAD3, FAD7, FAD8, acyl-lipid omega-3 desaturase
18 Sobic.003G136200 Cupin domain containing protein, expressed -
19 Sobic.002G063800 transferase family protein, putative, expressed -
20 Sobic.008G177400 strictosidine synthase, putative, expressed -


Gene co-expression network
sample Sobic006G234466 Sobic006G234466 Sobic010G045500 Sobic010G045500 Sobic006G234466--Sobic010G045500 Sobic001G342400 Sobic001G342400 Sobic006G234466--Sobic001G342400 Sobic001G504100 Sobic001G504100 Sobic006G234466--Sobic001G504100 Sobic002G301900 Sobic002G301900 Sobic006G234466--Sobic002G301900 Sobic006G050800 Sobic006G050800 Sobic006G234466--Sobic006G050800 Sobic010G270700 Sobic010G270700 Sobic006G234466--Sobic010G270700 Sobic008G009400 Sobic008G009400 Sobic006G234466--Sobic008G009400 Sobic001G242000 Sobic001G242000 Sobic006G234466--Sobic001G242000 Sobic001G234900 Sobic001G234900 Sobic006G234466--Sobic001G234900 Sobic001G242100 Sobic001G242100 Sobic010G045500--Sobic001G242100 Sobic010G045500--Sobic002G301900 Sobic010G045500--Sobic006G234466 Sobic004G180700 Sobic004G180700 Sobic010G045500--Sobic004G180700 Sobic005G215400 Sobic005G215400 Sobic010G045500--Sobic005G215400 Sobic004G322800 Sobic004G322800 Sobic010G045500--Sobic004G322800 Sobic010G045500--Sobic010G270700 Sobic004G301600 Sobic004G301600 Sobic010G045500--Sobic004G301600 Sobic008G128200 Sobic008G128200 Sobic010G045500--Sobic008G128200 Sobic001G342400--Sobic001G234900 Sobic002G391800 Sobic002G391800 Sobic001G342400--Sobic002G391800 Sobic001G342400--Sobic006G234466 Sobic001G342400--Sobic001G504100 Sobic001G379400 Sobic001G379400 Sobic001G342400--Sobic001G379400 Sobic003G183600 Sobic003G183600 Sobic001G342400--Sobic003G183600 Sobic006G089000 Sobic006G089000 Sobic001G342400--Sobic006G089000 Sobic010G147200 Sobic010G147200 Sobic001G342400--Sobic010G147200 Sobic001G342400--Sobic010G045500 Sobic001G504100--Sobic001G342400 Sobic001G504100--Sobic006G234466 Sobic001G504100--Sobic001G234900 Sobic001G504100--Sobic002G391800 Sobic005G222500 Sobic005G222500 Sobic001G504100--Sobic005G222500 Sobic010G211400 Sobic010G211400 Sobic001G504100--Sobic010G211400 Sobic001G504100--Sobic002G301900 Sobic001G504100--Sobic010G270700 Sobic001G504100--Sobic006G089000 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic001G502000 Sobic001G502000 Sobic002G301900--Sobic001G502000 Sobic006G170600 Sobic006G170600 Sobic002G301900--Sobic006G170600 Sobic003G400900 Sobic003G400900 Sobic002G301900--Sobic003G400900 Sobic002G301900--Sobic005G222500 Sobic004G299600 Sobic004G299600 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic002G301900--Sobic004G180700 Sobic006G050800--Sobic004G180700 Sobic010G196000 Sobic010G196000 Sobic006G050800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G050800--Sobic001G330300 Sobic006G202600 Sobic006G202600 Sobic006G050800--Sobic006G202600 Sobic004G295100 Sobic004G295100 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic010G009900 Sobic010G009900 Sobic006G050800--Sobic010G009900 Sobic003G282100 Sobic003G282100 Sobic010G270700--Sobic003G282100 Sobic010G270700--Sobic008G009400 Sobic010G270700--Sobic001G330300 SobicK026900 SobicK026900 Sobic010G270700--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic010G270700--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic003G311800 Sobic003G311800 Sobic010G270700--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G270700--Sobic009G109000 Sobic008G009400--Sobic004G297900 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic008G009400--Sobic003G299300 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic009G188000 Sobic009G188000 Sobic008G009400--Sobic009G188000 Sobic006G235200 Sobic006G235200 Sobic008G009400--Sobic006G235200 Sobic008G009400--Sobic001G330300 Sobic007G054900 Sobic007G054900 Sobic001G242000--Sobic007G054900 Sobic002G369400 Sobic002G369400 Sobic001G242000--Sobic002G369400 Sobic002G063800 Sobic002G063800 Sobic001G242000--Sobic002G063800 Sobic001G242000--Sobic001G330300 Sobic001G242000--Sobic010G270700 Sobic010G062300 Sobic010G062300 Sobic001G242000--Sobic010G062300 Sobic001G242000--Sobic006G050800 Sobic001G242000--Sobic010G009900 Sobic001G449100 Sobic001G449100 Sobic001G242000--Sobic001G449100 Sobic001G234900--Sobic001G342400 Sobic001G234900--Sobic001G379400 Sobic001G234900--Sobic002G391800 Sobic001G234900--Sobic010G147200 Sobic001G234900--Sobic006G089000 Sobic001G234900--Sobic003G183600 Sobic005G160700 Sobic005G160700 Sobic001G234900--Sobic005G160700 Sobic001G234900--Sobic001G242100 Sobic001G234900--Sobic001G502000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.