Gene annotation
Transcriptome id Sobic.008G177400.1
Synonym Sb08g022110
Functional annotation strictosidine synthase, putative, expressed
UniProt C5YSG1
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF34
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os08g07810.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G116600 C2 domain containing protein, putative, expressed -
2 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
3 Sobic.002G063800 transferase family protein, putative, expressed -
4 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.006G234466 - -
6 Sobic.006G050800 expressed protein -
7 Sobic.010G009900 - -
8 Sobic.008G173601 - -
9 Sobic.008G009400 - -
10 Sobic.010G062300 plant protein of unknown function domain containing protein, expressed -
11 Sobic.002G351300 expressed protein -
12 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
13 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
14 Sobic.004G316350 - -
15 Sobic.002G369400 Sulfotransferase family protein (At)(PubMedID : 27208977)@sulfotransferase domain containing protein, expressed -
16 Sobic.006G096000 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
18 Sobic.008G022000 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
19 Sobic.003G282100 POEI44 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase


Gene co-expression network
sample Sobic008G177400 Sobic008G177400 Sobic009G116600 Sobic009G116600 Sobic008G177400--Sobic009G116600 Sobic001G242000 Sobic001G242000 Sobic008G177400--Sobic001G242000 Sobic002G063800 Sobic002G063800 Sobic008G177400--Sobic002G063800 Sobic010G270700 Sobic010G270700 Sobic008G177400--Sobic010G270700 Sobic006G234466 Sobic006G234466 Sobic008G177400--Sobic006G234466 Sobic006G050800 Sobic006G050800 Sobic008G177400--Sobic006G050800 Sobic010G009900 Sobic010G009900 Sobic008G177400--Sobic010G009900 Sobic008G173601 Sobic008G173601 Sobic008G177400--Sobic008G173601 Sobic008G009400 Sobic008G009400 Sobic008G177400--Sobic008G009400 Sobic009G116600--Sobic010G009900 Sobic009G116600--Sobic008G177400 Sobic009G116600--Sobic006G050800 Sobic002G301900 Sobic002G301900 Sobic009G116600--Sobic002G301900 Sobic009G116600--Sobic006G234466 Sobic007G054900 Sobic007G054900 Sobic009G116600--Sobic007G054900 SobicK026900 SobicK026900 Sobic009G116600--SobicK026900 Sobic004G299600 Sobic004G299600 Sobic009G116600--Sobic004G299600 Sobic004G301600 Sobic004G301600 Sobic009G116600--Sobic004G301600 Sobic001G242000--Sobic007G054900 Sobic002G369400 Sobic002G369400 Sobic001G242000--Sobic002G369400 Sobic001G242000--Sobic002G063800 Sobic001G330300 Sobic001G330300 Sobic001G242000--Sobic001G330300 Sobic001G242000--Sobic010G270700 Sobic010G062300 Sobic010G062300 Sobic001G242000--Sobic010G062300 Sobic001G242000--Sobic006G050800 Sobic001G242000--Sobic010G009900 Sobic001G449100 Sobic001G449100 Sobic001G242000--Sobic001G449100 Sobic003G079200 Sobic003G079200 Sobic002G063800--Sobic003G079200 Sobic006G235000 Sobic006G235000 Sobic002G063800--Sobic006G235000 Sobic002G063800--Sobic010G062300 Sobic006G008000 Sobic006G008000 Sobic002G063800--Sobic006G008000 Sobic002G012300 Sobic002G012300 Sobic002G063800--Sobic002G012300 Sobic008G158600 Sobic008G158600 Sobic002G063800--Sobic008G158600 Sobic009G145600 Sobic009G145600 Sobic002G063800--Sobic009G145600 Sobic005G086600 Sobic005G086600 Sobic002G063800--Sobic005G086600 Sobic002G012500 Sobic002G012500 Sobic002G063800--Sobic002G012500 Sobic003G282100 Sobic003G282100 Sobic010G270700--Sobic003G282100 Sobic010G270700--Sobic008G009400 Sobic010G270700--Sobic001G330300 Sobic010G270700--SobicK026900 Sobic004G297900 Sobic004G297900 Sobic010G270700--Sobic004G297900 Sobic003G299300 Sobic003G299300 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic003G311800 Sobic003G311800 Sobic010G270700--Sobic003G311800 Sobic009G109000 Sobic009G109000 Sobic010G270700--Sobic009G109000 Sobic010G045500 Sobic010G045500 Sobic006G234466--Sobic010G045500 Sobic001G342400 Sobic001G342400 Sobic006G234466--Sobic001G342400 Sobic001G504100 Sobic001G504100 Sobic006G234466--Sobic001G504100 Sobic006G234466--Sobic002G301900 Sobic006G234466--Sobic006G050800 Sobic006G234466--Sobic010G270700 Sobic006G234466--Sobic008G009400 Sobic006G234466--Sobic001G242000 Sobic001G234900 Sobic001G234900 Sobic006G234466--Sobic001G234900 Sobic004G180700 Sobic004G180700 Sobic006G050800--Sobic004G180700 Sobic010G196000 Sobic010G196000 Sobic006G050800--Sobic010G196000 Sobic006G050800--Sobic001G330300 Sobic006G202600 Sobic006G202600 Sobic006G050800--Sobic006G202600 Sobic004G295100 Sobic004G295100 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic003G136200 Sobic003G136200 Sobic006G050800--Sobic003G136200 Sobic006G050800--Sobic010G009900 Sobic010G009900--Sobic007G054900 Sobic010G009900--Sobic006G050800 Sobic010G009900--Sobic009G116600 Sobic010G009900--Sobic001G242000 Sobic010G009900--SobicK026900 Sobic010G009900--Sobic010G045500 Sobic010G009900--Sobic002G369400 Sobic010G009900--Sobic003G136200 Sobic010G009900--Sobic002G012300 Sobic008G173601--Sobic010G270700 Sobic008G173500 Sobic008G173500 Sobic008G173601--Sobic008G173500 Sobic008G173601--Sobic001G242000 Sobic008G173601--Sobic008G177400 Sobic008G173601--Sobic003G282100 Sobic010G081100 Sobic010G081100 Sobic008G173601--Sobic010G081100 Sobic004G316350 Sobic004G316350 Sobic008G173601--Sobic004G316350 Sobic006G243600 Sobic006G243600 Sobic008G173601--Sobic006G243600 Sobic002G023200 Sobic002G023200 Sobic008G173601--Sobic002G023200 Sobic008G009400--Sobic004G297900 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic008G009400--Sobic003G299300 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic009G188000 Sobic009G188000 Sobic008G009400--Sobic009G188000 Sobic006G235200 Sobic006G235200 Sobic008G009400--Sobic006G235200 Sobic008G009400--Sobic001G330300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.