Gene annotation
Transcriptome id Sobic.009G116600.1
Synonym SRC2, (AT)SRC2, Sb09g018410
Functional annotation C2 domain containing protein, putative, expressed
UniProt C5YX69
Pfam PF00168
Panther DB PTHR32246 PTHR32246:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G16510 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os05g30740.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043319
Brachypodium -
Barley HORVU2Hr1G020030.2 , HORVU2Hr1G020030.1
Wheat TraesCS2B02G135100 , TraesCS2D02G119700 , TraesCS2A02G115400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G009900 - -
2 Sobic.008G177400 strictosidine synthase, putative, expressed -
3 Sobic.006G050800 expressed protein -
4 Sobic.002G301900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.006G234466 - -
6 Sobic.007G054900 plant protein of unknown function domain containing protein, expressed -
7 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.004G299600 - -
9 Sobic.004G301600 integral membrane protein, putative, expressed -
10 Sobic.006G255400 glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
11 Sobic.010G045500 AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
12 Sobic.001G242000 CSLF7 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
13 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.003G136200 Cupin domain containing protein, expressed -
15 Sobic.001G232700 - -
16 Sobic.001G242100 expressed protein -
17 Sobic.002G063800 transferase family protein, putative, expressed -
18 Sobic.006G217100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Cupin domain containing protein, expressed -
19 Sobic.008G173601 - -
20 Sobic.009G109000 expressed protein -


Gene co-expression network
sample Sobic009G116600 Sobic009G116600 Sobic010G009900 Sobic010G009900 Sobic009G116600--Sobic010G009900 Sobic008G177400 Sobic008G177400 Sobic009G116600--Sobic008G177400 Sobic006G050800 Sobic006G050800 Sobic009G116600--Sobic006G050800 Sobic002G301900 Sobic002G301900 Sobic009G116600--Sobic002G301900 Sobic006G234466 Sobic006G234466 Sobic009G116600--Sobic006G234466 Sobic007G054900 Sobic007G054900 Sobic009G116600--Sobic007G054900 SobicK026900 SobicK026900 Sobic009G116600--SobicK026900 Sobic004G299600 Sobic004G299600 Sobic009G116600--Sobic004G299600 Sobic004G301600 Sobic004G301600 Sobic009G116600--Sobic004G301600 Sobic010G009900--Sobic007G054900 Sobic010G009900--Sobic006G050800 Sobic010G009900--Sobic009G116600 Sobic001G242000 Sobic001G242000 Sobic010G009900--Sobic001G242000 Sobic010G009900--SobicK026900 Sobic010G045500 Sobic010G045500 Sobic010G009900--Sobic010G045500 Sobic002G369400 Sobic002G369400 Sobic010G009900--Sobic002G369400 Sobic003G136200 Sobic003G136200 Sobic010G009900--Sobic003G136200 Sobic002G012300 Sobic002G012300 Sobic010G009900--Sobic002G012300 Sobic008G177400--Sobic009G116600 Sobic008G177400--Sobic001G242000 Sobic002G063800 Sobic002G063800 Sobic008G177400--Sobic002G063800 Sobic010G270700 Sobic010G270700 Sobic008G177400--Sobic010G270700 Sobic008G177400--Sobic006G234466 Sobic008G177400--Sobic006G050800 Sobic008G177400--Sobic010G009900 Sobic008G173601 Sobic008G173601 Sobic008G177400--Sobic008G173601 Sobic008G009400 Sobic008G009400 Sobic008G177400--Sobic008G009400 Sobic004G180700 Sobic004G180700 Sobic006G050800--Sobic004G180700 Sobic010G196000 Sobic010G196000 Sobic006G050800--Sobic010G196000 Sobic001G330300 Sobic001G330300 Sobic006G050800--Sobic001G330300 Sobic006G202600 Sobic006G202600 Sobic006G050800--Sobic006G202600 Sobic004G295100 Sobic004G295100 Sobic006G050800--Sobic004G295100 Sobic006G050800--Sobic004G301600 Sobic006G050800--Sobic002G301900 Sobic006G050800--Sobic003G136200 Sobic006G050800--Sobic010G009900 Sobic001G242100 Sobic001G242100 Sobic002G301900--Sobic001G242100 Sobic002G301900--Sobic010G045500 Sobic001G502000 Sobic001G502000 Sobic002G301900--Sobic001G502000 Sobic006G170600 Sobic006G170600 Sobic002G301900--Sobic006G170600 Sobic003G400900 Sobic003G400900 Sobic002G301900--Sobic003G400900 Sobic005G222500 Sobic005G222500 Sobic002G301900--Sobic005G222500 Sobic002G301900--Sobic004G299600 Sobic002G183700 Sobic002G183700 Sobic002G301900--Sobic002G183700 Sobic002G301900--Sobic004G180700 Sobic006G234466--Sobic010G045500 Sobic001G342400 Sobic001G342400 Sobic006G234466--Sobic001G342400 Sobic001G504100 Sobic001G504100 Sobic006G234466--Sobic001G504100 Sobic006G234466--Sobic002G301900 Sobic006G234466--Sobic006G050800 Sobic006G234466--Sobic010G270700 Sobic006G234466--Sobic008G009400 Sobic006G234466--Sobic001G242000 Sobic001G234900 Sobic001G234900 Sobic006G234466--Sobic001G234900 Sobic007G054900--Sobic010G009900 Sobic007G054900--Sobic001G242000 Sobic008G158600 Sobic008G158600 Sobic007G054900--Sobic008G158600 Sobic004G292600 Sobic004G292600 Sobic007G054900--Sobic004G292600 Sobic007G054900--Sobic002G012300 Sobic005G011900 Sobic005G011900 Sobic007G054900--Sobic005G011900 Sobic007G054900--Sobic002G369400 Sobic001G162233 Sobic001G162233 Sobic007G054900--Sobic001G162233 Sobic008G158501 Sobic008G158501 Sobic007G054900--Sobic008G158501 Sobic004G297900 Sobic004G297900 SobicK026900--Sobic004G297900 Sobic007G090469 Sobic007G090469 SobicK026900--Sobic007G090469 Sobic001G238300 Sobic001G238300 SobicK026900--Sobic001G238300 SobicK026900--Sobic006G202600 Sobic004G202400 Sobic004G202400 SobicK026900--Sobic004G202400 Sobic002G425000 Sobic002G425000 SobicK026900--Sobic002G425000 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100 Sobic004G299600--Sobic005G222500 Sobic004G299600--Sobic001G502000 Sobic004G299600--Sobic003G400900 Sobic004G299600--Sobic002G301900 Sobic007G158800 Sobic007G158800 Sobic004G299600--Sobic007G158800 Sobic004G299600--Sobic001G242100 Sobic004G066700 Sobic004G066700 Sobic004G299600--Sobic004G066700 Sobic001G261509 Sobic001G261509 Sobic004G299600--Sobic001G261509 Sobic006G277500 Sobic006G277500 Sobic004G299600--Sobic006G277500 Sobic004G301600--Sobic004G180700 Sobic004G301600--Sobic006G170600 Sobic004G301600--Sobic006G202600 Sobic004G301600--Sobic006G050800 Sobic004G301600--Sobic002G301900 Sobic002G105300 Sobic002G105300 Sobic004G301600--Sobic002G105300 Sobic004G301600--Sobic007G090469 Sobic004G301600--Sobic010G196000 Sobic004G301600--Sobic004G295100
Octagon: transcription factors


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