Gene annotation
Transcriptome id Sobic.002G333800.1,Sobic.002G333800.2
Synonym CSLD2, ATCSLD2
Functional annotation CSLF8 - cellulose synthase-like family F
beta1,3
1,4 glucan synthase, expressed
UniProt A0A1B6QEW2 , A0A1B6QEV2
Pfam PF03552
Panther DB PTHR13301 PTHR13301:SF47
NCBI CDD -
KEGG Orthology K00770; 1,4-beta-D-xylan synthase
Gene Ontology GO:0016760; cellulose synthase (UDP-forming) activity GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT5G16910 : cellulose-synthase like D2
RAP-DB (Rice) LOC_Os07g36630.1 : CSLF8 - cellulose synthase-like family F; beta1,3;1,4 glucan synthase, expressed
MaizeGDB (Corn) Zm00025a048341
Brachypodium KQK15828 , KQK15827 , PNT74959
Barley HORVU1Hr1G022900.2 , HORVU1Hr1G022900.3 , HORVU1Hr1G022900.1 , HORVU1Hr1G022900.6 , HORVU1Hr1G022900.7 , HORVU1Hr1G022900.4 , HORVU1Hr1G022900.5 , HORVU1Hr1G022900.8 , HORVU1Hr1G022900.9 , HORVU1Hr1G022900.10 , HORVU1Hr1G022900.11 , HORVU2Hr1G042250.9 , HORVU2Hr1G042250.8 , HORVU2Hr1G042250.3 , HORVU2Hr1G042250.2 , HORVU2Hr1G042250.1 , HORVU2Hr1G042250.7 , HORVU2Hr1G042250.6 , HORVU2Hr1G042250.4
Wheat TraesCS2B02G236300 , TraesCS2B02G236300 , TraesCSU02G003300 , TraesCS1A02G099100 , TraesCS2A02G210100 , TraesCS2D02G216900 , TraesCS1D02G107100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
2 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
3 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
4 Sobic.006G191700 expansin precursor, putative, expressed -
5 Sobic.002G128800 fiber protein Fb34, putative, expressed -
6 Sobic.002G251100 ternary complex factor MIP1, putative, expressed -
7 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
8 Sobic.006G278100 expressed protein -
9 Sobic.003G340100 "domain confirmed by Pfam database, expressed in leaf, expression induced by BR treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
10 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
11 Sobic.009G220100 exostosin family domain containing protein, expressed -
12 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.001G344500 sucrose synthase(PubMedID : 26616172)@sucrose synthase, putative, expressed K00695: sucrose synthase
14 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
15 Sobic.003G410800 exostosin family domain containing protein, expressed -
16 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
17 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
18 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
19 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
20 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -


Gene co-expression network
sample Sobic002G333800 Sobic002G333800 Sobic001G107100 Sobic001G107100 Sobic002G333800--Sobic001G107100 Sobic001G038300 Sobic001G038300 Sobic002G333800--Sobic001G038300 Sobic001G409100 Sobic001G409100 Sobic002G333800--Sobic001G409100 Sobic006G191700 Sobic006G191700 Sobic002G333800--Sobic006G191700 Sobic002G128800 Sobic002G128800 Sobic002G333800--Sobic002G128800 Sobic002G251100 Sobic002G251100 Sobic002G333800--Sobic002G251100 Sobic002G396400 Sobic002G396400 Sobic002G333800--Sobic002G396400 Sobic006G278100 Sobic006G278100 Sobic002G333800--Sobic006G278100 Sobic003G340100 Sobic003G340100 Sobic002G333800--Sobic003G340100 Sobic001G107100--Sobic001G038300 Sobic003G250700 Sobic003G250700 Sobic001G107100--Sobic003G250700 Sobic001G107100--Sobic002G396400 Sobic001G107200 Sobic001G107200 Sobic001G107100--Sobic001G107200 Sobic001G107100--Sobic002G333800 Sobic002G252000 Sobic002G252000 Sobic001G107100--Sobic002G252000 Sobic001G107100--Sobic006G278100 Sobic001G156500 Sobic001G156500 Sobic001G107100--Sobic001G156500 Sobic007G090436 Sobic007G090436 Sobic001G107100--Sobic007G090436 Sobic001G038300--Sobic002G396400 Sobic001G038300--Sobic001G107100 Sobic001G038300--Sobic003G250700 Sobic001G418100 Sobic001G418100 Sobic001G038300--Sobic001G418100 Sobic010G047600 Sobic010G047600 Sobic001G038300--Sobic010G047600 Sobic001G434300 Sobic001G434300 Sobic001G038300--Sobic001G434300 Sobic001G475500 Sobic001G475500 Sobic001G038300--Sobic001G475500 Sobic007G150800 Sobic007G150800 Sobic001G038300--Sobic007G150800 Sobic003G122200 Sobic003G122200 Sobic001G038300--Sobic003G122200 Sobic001G409100--Sobic002G396400 Sobic003G410800 Sobic003G410800 Sobic001G409100--Sobic003G410800 Sobic004G221300 Sobic004G221300 Sobic001G409100--Sobic004G221300 Sobic006G036400 Sobic006G036400 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G224300 Sobic001G224300 Sobic001G409100--Sobic001G224300 Sobic001G409100--Sobic001G038300 Sobic010G180100 Sobic010G180100 Sobic001G409100--Sobic010G180100 Sobic009G220100 Sobic009G220100 Sobic001G409100--Sobic009G220100 Sobic001G261549 Sobic001G261549 Sobic006G191700--Sobic001G261549 Sobic006G191700--Sobic001G107200 Sobic006G191700--Sobic006G278100 Sobic009G189200 Sobic009G189200 Sobic006G191700--Sobic009G189200 Sobic001G528600 Sobic001G528600 Sobic006G191700--Sobic001G528600 Sobic007G094400 Sobic007G094400 Sobic006G191700--Sobic007G094400 Sobic008G096200 Sobic008G096200 Sobic006G191700--Sobic008G096200 Sobic004G331200 Sobic004G331200 Sobic006G191700--Sobic004G331200 Sobic001G078600 Sobic001G078600 Sobic006G191700--Sobic001G078600 Sobic002G128800--Sobic002G252000 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic006G156000 Sobic006G156000 Sobic002G128800--Sobic006G156000 Sobic003G219800 Sobic003G219800 Sobic002G128800--Sobic003G219800 Sobic003G443300 Sobic003G443300 Sobic002G128800--Sobic003G443300 Sobic001G470100 Sobic001G470100 Sobic002G251100--Sobic001G470100 Sobic002G251100--Sobic001G038300 Sobic002G251100--Sobic002G333800 Sobic004G285900 Sobic004G285900 Sobic002G251100--Sobic004G285900 Sobic001G531300 Sobic001G531300 Sobic002G251100--Sobic001G531300 Sobic002G251100--Sobic001G475500 Sobic003G034600 Sobic003G034600 Sobic002G251100--Sobic003G034600 Sobic002G251100--Sobic001G156500 Sobic009G181800 Sobic009G181800 Sobic002G251100--Sobic009G181800 Sobic002G396400--Sobic001G418100 Sobic002G396400--Sobic001G038300 Sobic002G396400--Sobic001G475500 Sobic002G396400--Sobic001G409100 Sobic002G396400--Sobic002G128800 Sobic009G232100 Sobic009G232100 Sobic002G396400--Sobic009G232100 Sobic002G154600 Sobic002G154600 Sobic002G396400--Sobic002G154600 Sobic002G396400--Sobic009G181800 Sobic009G088900 Sobic009G088900 Sobic002G396400--Sobic009G088900 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic006G278100--Sobic002G128800 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic006G278100--Sobic003G122200 Sobic006G278100--Sobic006G191700 Sobic006G278100--Sobic001G261549 Sobic010G138300 Sobic010G138300 Sobic003G340100--Sobic010G138300 Sobic006G227500 Sobic006G227500 Sobic003G340100--Sobic006G227500 Sobic009G221500 Sobic009G221500 Sobic003G340100--Sobic009G221500 Sobic001G430100 Sobic001G430100 Sobic003G340100--Sobic001G430100 Sobic007G050200 Sobic007G050200 Sobic003G340100--Sobic007G050200 Sobic010G190300 Sobic010G190300 Sobic003G340100--Sobic010G190300 Sobic008G102800 Sobic008G102800 Sobic003G340100--Sobic008G102800 Sobic003G340100--Sobic002G154600 Sobic003G300900 Sobic003G300900 Sobic003G340100--Sobic003G300900
Octagon: transcription factors


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