Gene annotation
Transcriptome id Sobic.004G333100.1
Synonym
Functional annotation expressed protein
UniProt C5XV18 , A0A125QUG9
Pfam -
Panther DB PTHR31414 PTHR31414:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G12400 : -
RAP-DB (Rice) LOC_Os02g55590.1 : expressed protein
MaizeGDB (Corn) Zm00025a022496
Brachypodium KQK01187 , KQK01188
Barley -
Wheat TraesCS6B02G399800 , TraesCS6B02G399800 , TraesCS6A02G365300 , TraesCS6D02G348700 , TraesCS6D02G348700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
2 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
3 Sobic.001G418000 NAD dependent epimerase/dehydratase family domain containing protein, expressed K12450: UDP-glucose 4,6-dehydratase
4 Sobic.004G303600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.003G055900 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
6 Sobic.010G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
8 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
9 Sobic.008G043500 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.005G133900 TPR repeat region family protein, expressed -
11 Sobic.003G319000 universal stress protein domain containing protein, putative, expressed -
12 Sobic.004G264600 expressed protein -
13 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G232300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
15 Sobic.007G054500 ABC-2 type transporter domain containing protein, expressed -
16 Sobic.002G128800 fiber protein Fb34, putative, expressed -
17 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
18 Sobic.003G353400 DHHC zinc finger domain containing protein, expressed K18932: palmitoyltransferase
19 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
20 Sobic.009G195900 OsFBT9 - F-box and tubby domain containing protein, expressed -


Gene co-expression network
sample Sobic004G333100 Sobic004G333100 Sobic001G436100 Sobic001G436100 Sobic004G333100--Sobic001G436100 Sobic002G075500 Sobic002G075500 Sobic004G333100--Sobic002G075500 Sobic001G418000 Sobic001G418000 Sobic004G333100--Sobic001G418000 Sobic004G303600 Sobic004G303600 Sobic004G333100--Sobic004G303600 Sobic003G055900 Sobic003G055900 Sobic004G333100--Sobic003G055900 Sobic010G165200 Sobic010G165200 Sobic004G333100--Sobic010G165200 Sobic002G252000 Sobic002G252000 Sobic004G333100--Sobic002G252000 Sobic009G194200 Sobic009G194200 Sobic004G333100--Sobic009G194200 Sobic008G043500 Sobic008G043500 Sobic004G333100--Sobic008G043500 Sobic001G116000 Sobic001G116000 Sobic001G436100--Sobic001G116000 Sobic001G196100 Sobic001G196100 Sobic001G436100--Sobic001G196100 Sobic001G436100--Sobic009G194200 Sobic001G026600 Sobic001G026600 Sobic001G436100--Sobic001G026600 Sobic004G331900 Sobic004G331900 Sobic001G436100--Sobic004G331900 Sobic001G436100--Sobic002G075500 Sobic001G313301 Sobic001G313301 Sobic001G436100--Sobic001G313301 Sobic001G436100--Sobic004G333100 Sobic003G319000 Sobic003G319000 Sobic001G436100--Sobic003G319000 Sobic009G063400 Sobic009G063400 Sobic002G075500--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic002G075500--Sobic009G125900 Sobic002G118700 Sobic002G118700 Sobic002G075500--Sobic002G118700 Sobic009G026101 Sobic009G026101 Sobic002G075500--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G075500--Sobic004G051300 Sobic001G099100 Sobic001G099100 Sobic002G075500--Sobic001G099100 Sobic007G180900 Sobic007G180900 Sobic002G075500--Sobic007G180900 Sobic003G254700 Sobic003G254700 Sobic002G075500--Sobic003G254700 Sobic006G156600 Sobic006G156600 Sobic002G075500--Sobic006G156600 Sobic001G418000--Sobic001G196100 Sobic003G096000 Sobic003G096000 Sobic001G418000--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic001G418000--Sobic010G089500 Sobic002G159900 Sobic002G159900 Sobic001G418000--Sobic002G159900 Sobic007G044400 Sobic007G044400 Sobic001G418000--Sobic007G044400 Sobic006G156000 Sobic006G156000 Sobic001G418000--Sobic006G156000 Sobic001G418000--Sobic003G319000 Sobic003G084300 Sobic003G084300 Sobic001G418000--Sobic003G084300 Sobic002G128800 Sobic002G128800 Sobic001G418000--Sobic002G128800 Sobic003G373800 Sobic003G373800 Sobic004G303600--Sobic003G373800 Sobic004G264600 Sobic004G264600 Sobic004G303600--Sobic004G264600 Sobic004G261200 Sobic004G261200 Sobic004G303600--Sobic004G261200 Sobic010G008600 Sobic010G008600 Sobic004G303600--Sobic010G008600 Sobic003G129400 Sobic003G129400 Sobic004G303600--Sobic003G129400 Sobic001G396400 Sobic001G396400 Sobic004G303600--Sobic001G396400 Sobic002G337800 Sobic002G337800 Sobic004G303600--Sobic002G337800 Sobic001G080300 Sobic001G080300 Sobic004G303600--Sobic001G080300 Sobic008G159100 Sobic008G159100 Sobic004G303600--Sobic008G159100 Sobic003G056000 Sobic003G056000 Sobic003G055900--Sobic003G056000 Sobic003G444200 Sobic003G444200 Sobic003G055900--Sobic003G444200 Sobic002G271300 Sobic002G271300 Sobic003G055900--Sobic002G271300 Sobic004G159100 Sobic004G159100 Sobic003G055900--Sobic004G159100 Sobic002G186900 Sobic002G186900 Sobic003G055900--Sobic002G186900 Sobic004G232300 Sobic004G232300 Sobic003G055900--Sobic004G232300 Sobic003G055900--Sobic007G044400 Sobic003G055900--Sobic008G043500 Sobic010G170300 Sobic010G170300 Sobic003G055900--Sobic010G170300 Sobic001G127800 Sobic001G127800 Sobic010G165200--Sobic001G127800 Sobic007G152800 Sobic007G152800 Sobic010G165200--Sobic007G152800 Sobic009G072200 Sobic009G072200 Sobic010G165200--Sobic009G072200 Sobic005G121200 Sobic005G121200 Sobic010G165200--Sobic005G121200 Sobic010G165200--Sobic004G333100 Sobic001G132800 Sobic001G132800 Sobic010G165200--Sobic001G132800 Sobic007G054500 Sobic007G054500 Sobic010G165200--Sobic007G054500 Sobic001G048900 Sobic001G048900 Sobic010G165200--Sobic001G048900 Sobic006G064800 Sobic006G064800 Sobic010G165200--Sobic006G064800 Sobic002G252000--Sobic002G128800 Sobic002G338400 Sobic002G338400 Sobic002G252000--Sobic002G338400 Sobic001G418100 Sobic001G418100 Sobic002G252000--Sobic001G418100 Sobic002G396400 Sobic002G396400 Sobic002G252000--Sobic002G396400 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic009G194200--Sobic010G008600 Sobic009G194200--Sobic001G436100 Sobic009G194200--Sobic004G261200 Sobic003G410700 Sobic003G410700 Sobic009G194200--Sobic003G410700 Sobic001G061900 Sobic001G061900 Sobic009G194200--Sobic001G061900 Sobic006G242100 Sobic006G242100 Sobic009G194200--Sobic006G242100 Sobic004G262600 Sobic004G262600 Sobic009G194200--Sobic004G262600 Sobic010G101400 Sobic010G101400 Sobic009G194200--Sobic010G101400 Sobic001G038200 Sobic001G038200 Sobic009G194200--Sobic001G038200 Sobic008G043500--Sobic004G159100 Sobic008G043500--Sobic002G271300 Sobic008G043500--Sobic001G313301 Sobic001G133900 Sobic001G133900 Sobic008G043500--Sobic001G133900 Sobic008G043500--Sobic002G252000 Sobic008G043500--Sobic003G444200 Sobic001G008900 Sobic001G008900 Sobic008G043500--Sobic001G008900 Sobic003G161500 Sobic003G161500 Sobic008G043500--Sobic003G161500 Sobic008G043500--Sobic001G436100
Octagon: transcription factors


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