Gene annotation
Transcriptome id Sobic.004G303600.1
Synonym AtMYB19, Sb04g033680, MYB19
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
MYB family transcription factor, putative, expressed
UniProt C5XSP8
Pfam PF00249
Panther DB PTHR10641 PTHR10641:SF629
NCBI CDD KOG0048; Transcription factor, Myb superfamily
KEGG Orthology K09422; transcription factor MYB, plant
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09540 : myb domain protein 61
RAP-DB (Rice) LOC_Os02g42850.2 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a020986 , Zm00025a032127 , Zm00025a018700 , Zm00025a024299 , Zm00025a010443 , Zm00025a036074 , Zm00025a005685
Brachypodium KQK22038 , KQK05100 , KQJ92025 , KQJ83755 , KQJ89177 , PNT67784 , KQK00510
Barley HORVU4Hr1G054420.3 , HORVU4Hr1G054420.2 , HORVU4Hr1G054420.4 , HORVU3Hr1G066860.9 , HORVU3Hr1G066860.8 , HORVU3Hr1G066860.7 , HORVU3Hr1G066860.6 , HORVU3Hr1G066860.5 , HORVU3Hr1G066860.4 , HORVU3Hr1G066860.3 , HORVU3Hr1G066860.2 , HORVU3Hr1G066860.1 , HORVU4Hr1G018360.2 , HORVU4Hr1G018360.6 , HORVU4Hr1G018360.7 , HORVU4Hr1G018360.5 , HORVU4Hr1G018360.8 , HORVU4Hr1G018360.9 , HORVU2Hr1G091590.1 , HORVU2Hr1G091590.2 , HORVU2Hr1G091590.3 , HORVU2Hr1G091590.4 , HORVU2Hr1G091590.5 , HORVU6Hr1G060600.1 , HORVU6Hr1G060600.2 , HORVU6Hr1G060610.3 , HORVU6Hr1G060610.2 , HORVU6Hr1G060610.4 , HORVU2Hr1G091530.4 , HORVU2Hr1G091530.5 , HORVU2Hr1G091530.2 , HORVU2Hr1G091530.3 , HORVU2Hr1G091530.1 , HORVU3Hr1G066860.11 , HORVU3Hr1G066860.10
Wheat TraesCS2A02G370700 , TraesCS4B02G096500 , TraesCS2B02G387700 , TraesCS4A02G118400 , TraesCS6B02G265200 , TraesCS4B02G186000 , TraesCS2A02G370300 , TraesCS2D02G366800 , TraesCS4A02G217800 , TraesCS4D02G092900 , TraesCS2B02G387300 , TraesCS6D02G219300 , TraesCS4D02G187100 , TraesCS6A02G236700 , TraesCS2B02G387800 , TraesCS2D02G366900 , TraesCS2A02G370400
Populus -


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cDNA sequences
Sobic.004G303600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G373800 expressed protein -
2 Sobic.004G264600 expressed protein -
3 Sobic.004G261200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.010G008600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLD2 - cellulose synthase-like family D, expressed -
5 Sobic.003G129400 glycosyltransferase family 43 protein, putative, expressed K00735: galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1
6 Sobic.001G396400 expressed protein -
7 Sobic.002G337800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.001G080300 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.008G159100 similar to Calmodulin-2(PubMedID : 29862293)@Ca2+ sensors group(PubMedID : 30367619)@OsCML5 - Calmodulin-related calcium sensor protein, expressed K02183: calmodulin
10 Sobic.006G193900 DUF581 domain containing protein, expressed -
11 Sobic.004G333100 expressed protein -
12 Sobic.002G372800 tyrosine protein kinase domain containing protein, putative, expressed -
13 Sobic.001G108350 - -
14 Sobic.009G194200 CSLC7 - cellulose synthase-like family C, expressed -
15 Sobic.004G257800 chloride transporter, chloride channel family, putative, expressed -
16 Sobic.001G436100 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
17 Sobic.008G000500 exo70 exocyst complex subunit domain containing protein, expressed -
18 Sobic.006G242100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase family 43 protein, putative, expressed -
19 Sobic.004G278200 DUF581 domain containing protein, expressed -
20 Sobic.001G063600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CAMK_CAMK_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase


Gene co-expression network
sample Sobic004G303600 Sobic004G303600 Sobic003G373800 Sobic003G373800 Sobic004G303600--Sobic003G373800 Sobic004G264600 Sobic004G264600 Sobic004G303600--Sobic004G264600 Sobic004G261200 Sobic004G261200 Sobic004G303600--Sobic004G261200 Sobic010G008600 Sobic010G008600 Sobic004G303600--Sobic010G008600 Sobic003G129400 Sobic003G129400 Sobic004G303600--Sobic003G129400 Sobic001G396400 Sobic001G396400 Sobic004G303600--Sobic001G396400 Sobic002G337800 Sobic002G337800 Sobic004G303600--Sobic002G337800 Sobic001G080300 Sobic001G080300 Sobic004G303600--Sobic001G080300 Sobic008G159100 Sobic008G159100 Sobic004G303600--Sobic008G159100 Sobic003G373800--Sobic002G337800 Sobic005G231700 Sobic005G231700 Sobic003G373800--Sobic005G231700 Sobic009G030200 Sobic009G030200 Sobic003G373800--Sobic009G030200 Sobic003G373800--Sobic004G303600 Sobic008G000500 Sobic008G000500 Sobic003G373800--Sobic008G000500 Sobic010G071700 Sobic010G071700 Sobic003G373800--Sobic010G071700 Sobic009G188100 Sobic009G188100 Sobic003G373800--Sobic009G188100 Sobic003G278700 Sobic003G278700 Sobic003G373800--Sobic003G278700 Sobic003G373800--Sobic003G129400 Sobic004G264600--Sobic010G008600 Sobic006G242100 Sobic006G242100 Sobic004G264600--Sobic006G242100 Sobic004G264600--Sobic004G303600 Sobic003G319000 Sobic003G319000 Sobic004G264600--Sobic003G319000 Sobic009G182200 Sobic009G182200 Sobic004G264600--Sobic009G182200 Sobic004G172100 Sobic004G172100 Sobic004G264600--Sobic004G172100 Sobic003G410400 Sobic003G410400 Sobic004G264600--Sobic003G410400 Sobic010G030900 Sobic010G030900 Sobic004G264600--Sobic010G030900 Sobic009G194200 Sobic009G194200 Sobic004G264600--Sobic009G194200 Sobic003G144600 Sobic003G144600 Sobic004G261200--Sobic003G144600 Sobic004G278200 Sobic004G278200 Sobic004G261200--Sobic004G278200 Sobic004G261200--Sobic009G194200 Sobic003G410700 Sobic003G410700 Sobic004G261200--Sobic003G410700 Sobic007G180900 Sobic007G180900 Sobic004G261200--Sobic007G180900 Sobic003G293600 Sobic003G293600 Sobic004G261200--Sobic003G293600 Sobic001G063600 Sobic001G063600 Sobic004G261200--Sobic001G063600 Sobic003G032900 Sobic003G032900 Sobic004G261200--Sobic003G032900 Sobic007G166900 Sobic007G166900 Sobic004G261200--Sobic007G166900 Sobic003G127100 Sobic003G127100 Sobic010G008600--Sobic003G127100 Sobic010G101400 Sobic010G101400 Sobic010G008600--Sobic010G101400 Sobic010G008600--Sobic004G264600 Sobic010G008600--Sobic010G030900 Sobic010G008600--Sobic009G194200 Sobic010G008600--Sobic001G063600 Sobic001G061900 Sobic001G061900 Sobic010G008600--Sobic001G061900 Sobic001G476400 Sobic001G476400 Sobic010G008600--Sobic001G476400 Sobic002G372800 Sobic002G372800 Sobic010G008600--Sobic002G372800 Sobic003G342600 Sobic003G342600 Sobic003G129400--Sobic003G342600 Sobic003G129400--Sobic010G071700 Sobic003G129400--Sobic001G063600 Sobic001G379000 Sobic001G379000 Sobic003G129400--Sobic001G379000 Sobic007G180300 Sobic007G180300 Sobic003G129400--Sobic007G180300 Sobic003G129400--Sobic009G030200 Sobic003G129400--Sobic005G231700 Sobic002G185300 Sobic002G185300 Sobic003G129400--Sobic002G185300 Sobic001G403600 Sobic001G403600 Sobic003G129400--Sobic001G403600 Sobic007G018550 Sobic007G018550 Sobic001G396400--Sobic007G018550 Sobic010G035900 Sobic010G035900 Sobic001G396400--Sobic010G035900 Sobic001G132800 Sobic001G132800 Sobic001G396400--Sobic001G132800 Sobic005G121200 Sobic005G121200 Sobic001G396400--Sobic005G121200 Sobic009G027800 Sobic009G027800 Sobic001G396400--Sobic009G027800 Sobic004G257800 Sobic004G257800 Sobic001G396400--Sobic004G257800 Sobic002G112300 Sobic002G112300 Sobic001G396400--Sobic002G112300 Sobic005G115800 Sobic005G115800 Sobic001G396400--Sobic005G115800 Sobic003G019700 Sobic003G019700 Sobic001G396400--Sobic003G019700 Sobic002G337800--Sobic005G231700 Sobic002G337800--Sobic008G159100 Sobic006G087900 Sobic006G087900 Sobic002G337800--Sobic006G087900 Sobic002G337800--Sobic001G063600 Sobic007G057100 Sobic007G057100 Sobic002G337800--Sobic007G057100 Sobic001G051800 Sobic001G051800 Sobic002G337800--Sobic001G051800 Sobic002G210300 Sobic002G210300 Sobic002G337800--Sobic002G210300 Sobic002G337800--Sobic008G000500 Sobic002G337800--Sobic005G121200 Sobic002G427400 Sobic002G427400 Sobic001G080300--Sobic002G427400 Sobic001G080300--Sobic004G278200 Sobic001G080300--Sobic007G166900 Sobic001G080300--Sobic008G159100 Sobic001G080300--Sobic003G032900 Sobic010G080400 Sobic010G080400 Sobic001G080300--Sobic010G080400 Sobic001G080300--Sobic001G063600 Sobic003G373150 Sobic003G373150 Sobic001G080300--Sobic003G373150 Sobic001G080300--Sobic005G115800 Sobic008G159100--Sobic001G063600 Sobic008G159100--Sobic002G427400 Sobic008G159100--Sobic008G000500 Sobic001G051600 Sobic001G051600 Sobic008G159100--Sobic001G051600 Sobic008G159100--Sobic001G476400 Sobic004G264500 Sobic004G264500 Sobic008G159100--Sobic004G264500 Sobic008G159100--Sobic005G231700 Sobic004G245850 Sobic004G245850 Sobic008G159100--Sobic004G245850 Sobic008G159100--Sobic001G080300
Octagon: transcription factors


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