Gene annotation
Transcriptome id Sobic.002G412800.1
Synonym Sb02g042550
Functional annotation stress-related protein, putative, expressed
UniProt C5X4Y7
Pfam PF05755
Panther DB PTHR33732 PTHR33732:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G05500 : Rubber elongation factor protein (REF)
RAP-DB (Rice) LOC_Os07g47510.1 : stress-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a049125
Brachypodium KQK14703
Barley -
Wheat TraesCS2A02G114000 , TraesCS2D02G114800
Populus -


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cDNA sequences
Sobic.002G412800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G369500 NPL4, putative, expressed K14015: NPLOC4, nuclear protein localization protein 4 homolog
2 Sobic.002G343300 zinc finger family protein, putative, expressed -
3 Sobic.010G267500 bZIP orthologous(PubMedID : 28671251)@E2F-related protein, putative, expressed -
4 Sobic.004G259500 expressed protein -
5 Sobic.009G135900 cysteine proteinase inhibitor precursor protein, putative, expressed -
6 Sobic.007G006600 expressed protein -
7 Sobic.001G417900 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
8 Sobic.001G128100 expressed protein -
9 Sobic.006G178000 coiled-coil domain-containing protein 124, putative, expressed -
10 Sobic.010G258800 OsFBX206 - F-box domain containing protein, expressed -
11 Sobic.010G185600 phospholipase D, putative, expressed K01115: phospholipase D1/2
12 Sobic.003G290100 dual specificity protein phosphatase, putative, expressed -
13 Sobic.007G044300 similar to Os08g0155400 protein(PubMedID : 29862293)@peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
14 Sobic.004G331800 alginate regulatory protein AlgP, putative, expressed -
15 Sobic.009G104000 ranBP1 domain containing protein, expressed K15306: Ran-binding protein 1
16 Sobic.003G402600 ubiquitin family domain containing protein, expressed K12160: SUMO, small ubiquitin-related modifier
17 Sobic.007G132700 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM motif family protein, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.001G161200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.17 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
19 Sobic.003G141000 protein phosphatase 2C, putative, expressed K14803: protein phosphatase PTC2/3
20 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC


Gene co-expression network
sample Sobic002G412800 Sobic002G412800 Sobic003G369500 Sobic003G369500 Sobic002G412800--Sobic003G369500 Sobic002G343300 Sobic002G343300 Sobic002G412800--Sobic002G343300 Sobic010G267500 Sobic010G267500 Sobic002G412800--Sobic010G267500 Sobic004G259500 Sobic004G259500 Sobic002G412800--Sobic004G259500 Sobic009G135900 Sobic009G135900 Sobic002G412800--Sobic009G135900 Sobic007G006600 Sobic007G006600 Sobic002G412800--Sobic007G006600 Sobic001G417900 Sobic001G417900 Sobic002G412800--Sobic001G417900 Sobic001G128100 Sobic001G128100 Sobic002G412800--Sobic001G128100 Sobic006G178000 Sobic006G178000 Sobic002G412800--Sobic006G178000 Sobic004G060600 Sobic004G060600 Sobic003G369500--Sobic004G060600 Sobic003G077900 Sobic003G077900 Sobic003G369500--Sobic003G077900 Sobic009G131100 Sobic009G131100 Sobic003G369500--Sobic009G131100 Sobic001G428200 Sobic001G428200 Sobic003G369500--Sobic001G428200 Sobic007G091000 Sobic007G091000 Sobic003G369500--Sobic007G091000 Sobic001G428100 Sobic001G428100 Sobic003G369500--Sobic001G428100 Sobic007G044300 Sobic007G044300 Sobic003G369500--Sobic007G044300 Sobic003G369500--Sobic010G267500 Sobic003G277000 Sobic003G277000 Sobic003G369500--Sobic003G277000 Sobic004G255700 Sobic004G255700 Sobic002G343300--Sobic004G255700 Sobic008G047400 Sobic008G047400 Sobic002G343300--Sobic008G047400 Sobic006G033200 Sobic006G033200 Sobic002G343300--Sobic006G033200 Sobic004G059900 Sobic004G059900 Sobic002G343300--Sobic004G059900 Sobic009G066900 Sobic009G066900 Sobic002G343300--Sobic009G066900 Sobic002G134600 Sobic002G134600 Sobic002G343300--Sobic002G134600 Sobic008G124900 Sobic008G124900 Sobic002G343300--Sobic008G124900 Sobic009G219900 Sobic009G219900 Sobic002G343300--Sobic009G219900 Sobic001G541100 Sobic001G541100 Sobic002G343300--Sobic001G541100 Sobic006G207500 Sobic006G207500 Sobic010G267500--Sobic006G207500 Sobic010G267500--Sobic004G060600 Sobic007G097900 Sobic007G097900 Sobic010G267500--Sobic007G097900 Sobic010G267500--Sobic003G369500 Sobic003G402600 Sobic003G402600 Sobic010G267500--Sobic003G402600 Sobic007G226100 Sobic007G226100 Sobic010G267500--Sobic007G226100 Sobic003G361500 Sobic003G361500 Sobic010G267500--Sobic003G361500 Sobic004G001400 Sobic004G001400 Sobic010G267500--Sobic004G001400 Sobic008G137600 Sobic008G137600 Sobic010G267500--Sobic008G137600 Sobic007G188100 Sobic007G188100 Sobic004G259500--Sobic007G188100 Sobic009G171100 Sobic009G171100 Sobic004G259500--Sobic009G171100 Sobic002G353400 Sobic002G353400 Sobic004G259500--Sobic002G353400 Sobic003G425200 Sobic003G425200 Sobic004G259500--Sobic003G425200 Sobic003G294400 Sobic003G294400 Sobic004G259500--Sobic003G294400 Sobic001G525400 Sobic001G525400 Sobic004G259500--Sobic001G525400 Sobic002G379400 Sobic002G379400 Sobic004G259500--Sobic002G379400 Sobic008G016900 Sobic008G016900 Sobic004G259500--Sobic008G016900 Sobic004G278000 Sobic004G278000 Sobic004G259500--Sobic004G278000 Sobic004G058200 Sobic004G058200 Sobic009G135900--Sobic004G058200 Sobic009G135900--Sobic004G255700 Sobic005G033200 Sobic005G033200 Sobic009G135900--Sobic005G033200 Sobic003G350800 Sobic003G350800 Sobic009G135900--Sobic003G350800 Sobic009G217900 Sobic009G217900 Sobic009G135900--Sobic009G217900 Sobic009G135900--Sobic009G219900 Sobic004G247000 Sobic004G247000 Sobic009G135900--Sobic004G247000 Sobic009G135900--Sobic003G369500 Sobic001G328200 Sobic001G328200 Sobic009G135900--Sobic001G328200 Sobic003G367300 Sobic003G367300 Sobic007G006600--Sobic003G367300 Sobic002G118600 Sobic002G118600 Sobic007G006600--Sobic002G118600 Sobic001G450700 Sobic001G450700 Sobic007G006600--Sobic001G450700 Sobic007G169200 Sobic007G169200 Sobic007G006600--Sobic007G169200 Sobic002G293300 Sobic002G293300 Sobic007G006600--Sobic002G293300 Sobic002G330300 Sobic002G330300 Sobic007G006600--Sobic002G330300 Sobic010G094600 Sobic010G094600 Sobic007G006600--Sobic010G094600 Sobic007G006600--Sobic007G188100 Sobic001G147200 Sobic001G147200 Sobic007G006600--Sobic001G147200 Sobic001G417900--Sobic003G077900 Sobic002G431600 Sobic002G431600 Sobic001G417900--Sobic002G431600 Sobic003G122500 Sobic003G122500 Sobic001G417900--Sobic003G122500 Sobic010G277100 Sobic010G277100 Sobic001G417900--Sobic010G277100 Sobic002G071000 Sobic002G071000 Sobic001G417900--Sobic002G071000 Sobic003G299000 Sobic003G299000 Sobic001G417900--Sobic003G299000 Sobic001G049500 Sobic001G049500 Sobic001G417900--Sobic001G049500 Sobic001G427500 Sobic001G427500 Sobic001G417900--Sobic001G427500 Sobic001G414500 Sobic001G414500 Sobic001G417900--Sobic001G414500 Sobic005G175300 Sobic005G175300 Sobic001G128100--Sobic005G175300 Sobic003G253800 Sobic003G253800 Sobic001G128100--Sobic003G253800 Sobic006G265000 Sobic006G265000 Sobic001G128100--Sobic006G265000 Sobic001G314800 Sobic001G314800 Sobic001G128100--Sobic001G314800 Sobic003G325500 Sobic003G325500 Sobic001G128100--Sobic003G325500 Sobic001G128100--Sobic003G369500 Sobic001G128100--Sobic001G428200 Sobic002G073900 Sobic002G073900 Sobic001G128100--Sobic002G073900 Sobic007G196600 Sobic007G196600 Sobic001G128100--Sobic007G196600 Sobic006G178000--Sobic003G369500 Sobic006G178000--Sobic010G267500 Sobic007G137600 Sobic007G137600 Sobic006G178000--Sobic007G137600 Sobic003G279200 Sobic003G279200 Sobic006G178000--Sobic003G279200 Sobic010G026925 Sobic010G026925 Sobic006G178000--Sobic010G026925 Sobic006G178000--Sobic003G402600 Sobic004G057200 Sobic004G057200 Sobic006G178000--Sobic004G057200 Sobic001G082000 Sobic001G082000 Sobic006G178000--Sobic001G082000 Sobic003G308400 Sobic003G308400 Sobic006G178000--Sobic003G308400
Octagon: transcription factors


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