Gene annotation
Transcriptome id Sobic.004G134500.1
Synonym Sb04g013380
Functional annotation expressed protein
UniProt A0A194YQK3
Pfam -
Panther DB PTHR37258
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G24500 : -
RAP-DB (Rice) LOC_Os06g21120.2 : expressed protein
MaizeGDB (Corn) Zm00025a034305
Brachypodium KQJ92604
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G134500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G017400 APOBEC1 complementation factor, putative, expressed K13161: heterogeneous nuclear ribonucleoprotein R
2 Sobic.003G037900 ZOS3-23 - C2H2 zinc finger protein, expressed K12848: U4/U6.U5 tri-snRNP component SNU23
3 Sobic.001G199900 expressed protein -
4 Sobic.007G050400 - K12811: DDX46, ATP-dependent RNA helicase DDX46/PRP5
5 Sobic.007G106400 endothelial differentiation-related factor 1, putative, expressed K03627: putative transcription factor
6 Sobic.002G293900 mitochondrial glycoprotein, putative, expressed -
7 Sobic.001G237700 RNA recognition motif containing protein, putative, expressed K13091: RBM39, RNA-binding protein 39
8 Sobic.002G337300 expressed protein -
9 Sobic.007G222800 RNA recognition motif family protein, expressed K14398: cleavage and polyadenylation specificity factor subunit 6/7
10 Sobic.006G122900 expressed protein K15360: STRA13, CENPX, centromere protein X
11 Sobic.005G033300 microfibrillar-associated protein 1, putative, expressed K13110: microfibrillar-associated protein 1
12 Sobic.001G361900 ATPase, putative, expressed K08900: mitochondrial chaperone BCS1
13 Sobic.003G219400 RNA recognition motif containing protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
14 Sobic.007G013500 expressed protein -
15 Sobic.010G092100 PCF-like (ClassI) Subclade 5 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP-domain protein, putative, expressed -
16 Sobic.004G307700 cyclin-dependent kinase inhibitor, putative, expressed -
17 Sobic.004G210101 - -
18 Sobic.003G052700 -(PubMedID : 23108465)@alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
19 Sobic.010G018800 impaired sucrose induction 1, putative, expressed -
20 Sobic.006G157300 expressed protein -


Gene co-expression network
sample Sobic004G134500 Sobic004G134500 Sobic007G017400 Sobic007G017400 Sobic004G134500--Sobic007G017400 Sobic003G037900 Sobic003G037900 Sobic004G134500--Sobic003G037900 Sobic001G199900 Sobic001G199900 Sobic004G134500--Sobic001G199900 Sobic007G050400 Sobic007G050400 Sobic004G134500--Sobic007G050400 Sobic007G106400 Sobic007G106400 Sobic004G134500--Sobic007G106400 Sobic002G293900 Sobic002G293900 Sobic004G134500--Sobic002G293900 Sobic001G237700 Sobic001G237700 Sobic004G134500--Sobic001G237700 Sobic002G337300 Sobic002G337300 Sobic004G134500--Sobic002G337300 Sobic007G222800 Sobic007G222800 Sobic004G134500--Sobic007G222800 Sobic007G156101 Sobic007G156101 Sobic007G017400--Sobic007G156101 Sobic007G017400--Sobic001G237700 Sobic007G017400--Sobic002G337300 Sobic007G017400--Sobic004G134500 Sobic003G267900 Sobic003G267900 Sobic007G017400--Sobic003G267900 Sobic001G017900 Sobic001G017900 Sobic007G017400--Sobic001G017900 Sobic001G423700 Sobic001G423700 Sobic007G017400--Sobic001G423700 Sobic003G408800 Sobic003G408800 Sobic007G017400--Sobic003G408800 Sobic007G159800 Sobic007G159800 Sobic007G017400--Sobic007G159800 Sobic003G037900--Sobic004G134500 Sobic001G316700 Sobic001G316700 Sobic003G037900--Sobic001G316700 Sobic008G075900 Sobic008G075900 Sobic003G037900--Sobic008G075900 Sobic002G166500 Sobic002G166500 Sobic003G037900--Sobic002G166500 Sobic006G248700 Sobic006G248700 Sobic003G037900--Sobic006G248700 Sobic006G122900 Sobic006G122900 Sobic003G037900--Sobic006G122900 Sobic008G093500 Sobic008G093500 Sobic003G037900--Sobic008G093500 Sobic003G037900--Sobic001G423700 Sobic003G284500 Sobic003G284500 Sobic003G037900--Sobic003G284500 Sobic001G199900--Sobic004G134500 Sobic001G199900--Sobic003G037900 Sobic004G307700 Sobic004G307700 Sobic001G199900--Sobic004G307700 Sobic001G199900--Sobic006G122900 Sobic001G199900--Sobic007G222800 Sobic002G287500 Sobic002G287500 Sobic001G199900--Sobic002G287500 Sobic005G033300 Sobic005G033300 Sobic001G199900--Sobic005G033300 Sobic002G228600 Sobic002G228600 Sobic001G199900--Sobic002G228600 Sobic005G076650 Sobic005G076650 Sobic001G199900--Sobic005G076650 Sobic007G050400--Sobic001G237700 Sobic010G269500 Sobic010G269500 Sobic007G050400--Sobic010G269500 Sobic007G050400--Sobic002G337300 Sobic007G050400--Sobic001G423700 Sobic007G050400--Sobic003G037900 Sobic007G050400--Sobic004G134500 Sobic004G327400 Sobic004G327400 Sobic007G050400--Sobic004G327400 Sobic007G013500 Sobic007G013500 Sobic007G050400--Sobic007G013500 Sobic009G255300 Sobic009G255300 Sobic007G050400--Sobic009G255300 Sobic007G106400--Sobic007G013500 Sobic007G106400--Sobic009G255300 Sobic001G543500 Sobic001G543500 Sobic007G106400--Sobic001G543500 Sobic001G429100 Sobic001G429100 Sobic007G106400--Sobic001G429100 Sobic003G359800 Sobic003G359800 Sobic007G106400--Sobic003G359800 Sobic005G005500 Sobic005G005500 Sobic007G106400--Sobic005G005500 Sobic008G139900 Sobic008G139900 Sobic007G106400--Sobic008G139900 Sobic004G033900 Sobic004G033900 Sobic007G106400--Sobic004G033900 Sobic007G106400--Sobic002G293900 Sobic008G028500 Sobic008G028500 Sobic002G293900--Sobic008G028500 Sobic002G276700 Sobic002G276700 Sobic002G293900--Sobic002G276700 Sobic002G293900--Sobic001G429100 Sobic005G232000 Sobic005G232000 Sobic002G293900--Sobic005G232000 SobicK044200 SobicK044200 Sobic002G293900--SobicK044200 Sobic010G189800 Sobic010G189800 Sobic002G293900--Sobic010G189800 Sobic009G154000 Sobic009G154000 Sobic002G293900--Sobic009G154000 Sobic010G114500 Sobic010G114500 Sobic002G293900--Sobic010G114500 Sobic002G293900--Sobic007G013500 Sobic001G237700--Sobic001G423700 Sobic001G237700--Sobic007G017400 Sobic005G195800 Sobic005G195800 Sobic001G237700--Sobic005G195800 Sobic001G237700--Sobic007G050400 Sobic002G425800 Sobic002G425800 Sobic001G237700--Sobic002G425800 Sobic001G237700--Sobic004G327400 Sobic001G237700--Sobic002G337300 Sobic004G354700 Sobic004G354700 Sobic001G237700--Sobic004G354700 Sobic001G237700--Sobic002G166500 Sobic002G337300--Sobic001G423700 Sobic002G337300--Sobic007G017400 Sobic002G337300--Sobic007G050400 Sobic002G337300--Sobic001G237700 Sobic002G337300--Sobic003G408800 Sobic002G297800 Sobic002G297800 Sobic002G337300--Sobic002G297800 Sobic002G337300--Sobic007G156101 Sobic003G176900 Sobic003G176900 Sobic002G337300--Sobic003G176900 Sobic006G204200 Sobic006G204200 Sobic002G337300--Sobic006G204200 Sobic006G080000 Sobic006G080000 Sobic007G222800--Sobic006G080000 Sobic007G222800--Sobic005G033300 Sobic007G096200 Sobic007G096200 Sobic007G222800--Sobic007G096200 Sobic002G140900 Sobic002G140900 Sobic007G222800--Sobic002G140900 Sobic007G222800--Sobic004G134500 Sobic007G222800--Sobic001G199900 Sobic005G164500 Sobic005G164500 Sobic007G222800--Sobic005G164500 Sobic010G171100 Sobic010G171100 Sobic007G222800--Sobic010G171100 Sobic009G105800 Sobic009G105800 Sobic007G222800--Sobic009G105800
Octagon: transcription factors


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