Gene annotation
Transcriptome id Sobic.004G327500.1
Synonym Sb04g035685, NUDT3, atnudt3
Functional annotation hydrolase, NUDIX family, domain containing protein, expressed
UniProt A0A1Z5RQJ7
Pfam PF03571 PF00293
Panther DB PTHR23422 PTHR23422:SF9
NCBI CDD KOG0142; Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity


Orthologs (automatic annotation)
TAIR AT1G79690 : nudix hydrolase homolog 3
RAP-DB (Rice) LOC_Os02g55030.1 : hydrolase, NUDIX family, domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032954
Brachypodium KQK01110 , KQK01109
Barley HORVU6Hr1G084590.5 , HORVU4Hr1G048000.2 , HORVU4Hr1G048000.3 , HORVU6Hr1G084590.7 , HORVU6Hr1G084590.8 , HORVU6Hr1G084590.2 , HORVU6Hr1G084590.3 , HORVU6Hr1G084590.1 , HORVU6Hr1G084590.6 , HORVU6Hr1G084590.4
Wheat TraesCS5A02G366500 , TraesCS6D02G336400 , TraesCS6D02G336400 , TraesCS6D02G336400 , TraesCS1D02G416700 , TraesCS6B02G387000 , TraesCS6A02G354100 , TraesCS6A02G354100
Populus -


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cDNA sequences
Sobic.004G327500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G061400 expressed protein -
2 Sobic.001G004000 avr9/Cf-9 rapidly elicited protein, putative, expressed -
3 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
4 Sobic.001G410800 OsTOP6A3 - Topoisomerase 6 subunit A homolog 3, expressed K10878: meiotic recombination protein SPO11
5 Sobic.001G220200 exo70 exocyst complex subunit domain containing protein, expressed -
6 Sobic.001G406901 - -
7 Sobic.001G519300 plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
8 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
9 Sobic.010G158766 - -
10 Sobic.007G224600 - -
11 Sobic.001G223400 glucosyltransferase, putative, expressed -
12 Sobic.002G263900 expressed protein -
13 Sobic.006G069050 - -
14 Sobic.003G427500 cytochrome P450, putative, expressed -
15 Sobic.001G115800 expressed protein -
16 Sobic.004G357033 - -
17 Sobic.005G232200 expressed protein -
18 Sobic.002G320900 patatin-like phospholipase family protein, expressed -
19 Sobic.006G065700 DUF677 domain containing protein, putative, expressed -
20 Sobic.009G225300 - -


Gene co-expression network
sample Sobic004G327500 Sobic004G327500 Sobic005G061400 Sobic005G061400 Sobic004G327500--Sobic005G061400 Sobic001G004000 Sobic001G004000 Sobic004G327500--Sobic001G004000 Sobic003G179100 Sobic003G179100 Sobic004G327500--Sobic003G179100 Sobic001G410800 Sobic001G410800 Sobic004G327500--Sobic001G410800 Sobic001G220200 Sobic001G220200 Sobic004G327500--Sobic001G220200 Sobic001G406901 Sobic001G406901 Sobic004G327500--Sobic001G406901 Sobic001G519300 Sobic001G519300 Sobic004G327500--Sobic001G519300 Sobic004G275500 Sobic004G275500 Sobic004G327500--Sobic004G275500 Sobic010G158766 Sobic010G158766 Sobic004G327500--Sobic010G158766 Sobic001G223400 Sobic001G223400 Sobic005G061400--Sobic001G223400 Sobic010G136601 Sobic010G136601 Sobic005G061400--Sobic010G136601 Sobic001G460800 Sobic001G460800 Sobic005G061400--Sobic001G460800 Sobic005G061400--Sobic001G410800 Sobic006G065700 Sobic006G065700 Sobic005G061400--Sobic006G065700 Sobic002G285800 Sobic002G285800 Sobic005G061400--Sobic002G285800 Sobic005G061400--Sobic001G519300 Sobic003G427500 Sobic003G427500 Sobic005G061400--Sobic003G427500 Sobic002G320900 Sobic002G320900 Sobic005G061400--Sobic002G320900 Sobic001G004000--Sobic004G275500 Sobic007G224600 Sobic007G224600 Sobic001G004000--Sobic007G224600 Sobic001G004000--Sobic006G065700 Sobic001G004000--Sobic001G519300 Sobic002G284901 Sobic002G284901 Sobic001G004000--Sobic002G284901 Sobic001G004000--Sobic002G320900 Sobic001G115800 Sobic001G115800 Sobic001G004000--Sobic001G115800 Sobic003G120400 Sobic003G120400 Sobic001G004000--Sobic003G120400 Sobic009G198400 Sobic009G198400 Sobic001G004000--Sobic009G198400 Sobic010G073300 Sobic010G073300 Sobic003G179100--Sobic010G073300 Sobic003G179100--Sobic002G284901 Sobic003G179100--Sobic002G320900 Sobic003G179100--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic003G179100--Sobic001G525000 Sobic003G179100--Sobic006G065700 Sobic002G430200 Sobic002G430200 Sobic003G179100--Sobic002G430200 Sobic002G387100 Sobic002G387100 Sobic003G179100--Sobic002G387100 Sobic003G179100--Sobic001G519300 Sobic001G410800--Sobic001G220200 Sobic004G357033 Sobic004G357033 Sobic001G410800--Sobic004G357033 Sobic002G218200 Sobic002G218200 Sobic001G410800--Sobic002G218200 Sobic010G096801 Sobic010G096801 Sobic001G410800--Sobic010G096801 Sobic001G535601 Sobic001G535601 Sobic001G410800--Sobic001G535601 Sobic001G139600 Sobic001G139600 Sobic001G410800--Sobic001G139600 Sobic001G410800--Sobic010G158766 Sobic001G410800--Sobic010G136601 Sobic001G410800--Sobic001G223400 Sobic001G220200--Sobic010G158766 Sobic001G220200--Sobic001G410800 Sobic001G220200--Sobic004G357033 Sobic004G344301 Sobic004G344301 Sobic001G220200--Sobic004G344301 Sobic001G220200--Sobic010G096801 Sobic001G220200--Sobic007G224600 Sobic001G220200--Sobic001G519300 Sobic009G225300 Sobic009G225300 Sobic001G220200--Sobic009G225300 Sobic004G357066 Sobic004G357066 Sobic001G220200--Sobic004G357066 Sobic002G210200 Sobic002G210200 Sobic001G406901--Sobic002G210200 Sobic004G082151 Sobic004G082151 Sobic001G406901--Sobic004G082151 Sobic003G200501 Sobic003G200501 Sobic001G406901--Sobic003G200501 Sobic003G065001 Sobic003G065001 Sobic001G406901--Sobic003G065001 Sobic001G406901--Sobic002G320900 Sobic007G093400 Sobic007G093400 Sobic001G406901--Sobic007G093400 Sobic003G367401 Sobic003G367401 Sobic001G406901--Sobic003G367401 Sobic001G406901--Sobic002G284901 Sobic001G406901--Sobic001G525000 Sobic001G519300--Sobic007G224600 Sobic001G519300--Sobic002G320900 Sobic001G519300--Sobic002G284901 Sobic001G519300--Sobic001G223400 Sobic001G519300--Sobic006G065700 Sobic007G221800 Sobic007G221800 Sobic001G519300--Sobic007G221800 Sobic001G519300--Sobic002G210200 Sobic001G519300--Sobic003G200501 Sobic001G519300--Sobic003G120400 Sobic004G275500--Sobic001G115800 Sobic004G275500--Sobic007G221800 Sobic004G275500--Sobic001G519300 Sobic001G158000 Sobic001G158000 Sobic004G275500--Sobic001G158000 Sobic007G149600 Sobic007G149600 Sobic004G275500--Sobic007G149600 Sobic004G275500--Sobic007G224600 Sobic001G193400 Sobic001G193400 Sobic004G275500--Sobic001G193400 Sobic004G275500--Sobic002G284901 Sobic006G227800 Sobic006G227800 Sobic004G275500--Sobic006G227800 Sobic010G158766--Sobic001G220200 Sobic010G158766--Sobic004G357033 Sobic010G158766--Sobic001G410800 Sobic010G158766--Sobic010G096801 Sobic010G158766--Sobic004G344301 Sobic010G158766--Sobic009G225300 Sobic006G259201 Sobic006G259201 Sobic010G158766--Sobic006G259201 Sobic010G158100 Sobic010G158100 Sobic010G158766--Sobic010G158100 Sobic010G158766--Sobic007G224600
Octagon: transcription factors


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