Gene annotation
Transcriptome id Sobic.007G156101.1
Synonym -
Functional annotation -
UniProt A0A1Z5RA30
Pfam -
Panther DB PTHR32011 PTHR32011:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G67020 : -
RAP-DB (Rice) LOC_Os08g36820.1 : expressed protein
MaizeGDB (Corn) Zm00025a005421 , Zm00025a030642
Brachypodium KQJ98636
Barley HORVU5Hr1G068280.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G267900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
2 Sobic.001G017900 FAD binding protein, putative, expressed -
3 Sobic.007G017400 APOBEC1 complementation factor, putative, expressed K13161: heterogeneous nuclear ribonucleoprotein R
4 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
5 Sobic.006G192400 U-box domain-containing protein, putative, expressed -
6 Sobic.008G163700 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
7 Sobic.007G159800 DNA binding protein, putative, expressed -
8 Sobic.004G284400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
9 Sobic.002G337300 expressed protein -
10 Sobic.002G426900 DNAJ heat shock N-terminal domain-containing protein, putative, expressed -
11 Sobic.002G306300 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
12 Sobic.004G279300 photoperiodic flowering time gene(PubMedID : 22394582)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed -
13 Sobic.009G230400 cytokinin-N-glucosyltransferase 1, putative, expressed -
14 Sobic.006G157300 expressed protein -
15 Sobic.003G397000 expressed protein -
16 Sobic.010G095500 NHL repeat-containing protein, putative, expressed -
17 Sobic.001G061500 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
18 Sobic.003G052700 -(PubMedID : 23108465)@alliin lyase precursor, putative, expressed K16903: L-tryptophan---pyruvate aminotransferase
19 Sobic.003G126500 hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
20 Sobic.006G169400 expressed protein -


Gene co-expression network
sample Sobic007G156101 Sobic007G156101 Sobic003G267900 Sobic003G267900 Sobic007G156101--Sobic003G267900 Sobic001G017900 Sobic001G017900 Sobic007G156101--Sobic001G017900 Sobic007G017400 Sobic007G017400 Sobic007G156101--Sobic007G017400 Sobic002G285300 Sobic002G285300 Sobic007G156101--Sobic002G285300 Sobic006G192400 Sobic006G192400 Sobic007G156101--Sobic006G192400 Sobic008G163700 Sobic008G163700 Sobic007G156101--Sobic008G163700 Sobic007G159800 Sobic007G159800 Sobic007G156101--Sobic007G159800 Sobic004G284400 Sobic004G284400 Sobic007G156101--Sobic004G284400 Sobic002G337300 Sobic002G337300 Sobic007G156101--Sobic002G337300 Sobic003G267900--Sobic007G156101 Sobic003G267900--Sobic002G285300 Sobic003G267900--Sobic001G017900 Sobic003G267900--Sobic006G192400 Sobic003G267900--Sobic004G284400 Sobic003G267900--Sobic007G017400 Sobic010G036000 Sobic010G036000 Sobic003G267900--Sobic010G036000 Sobic003G267900--Sobic008G163700 Sobic003G397000 Sobic003G397000 Sobic003G267900--Sobic003G397000 Sobic001G017900--Sobic006G192400 Sobic001G017900--Sobic002G285300 Sobic001G017900--Sobic008G163700 Sobic001G017900--Sobic007G156101 Sobic001G017900--Sobic003G267900 Sobic006G157300 Sobic006G157300 Sobic001G017900--Sobic006G157300 Sobic001G017900--Sobic004G284400 Sobic009G255300 Sobic009G255300 Sobic001G017900--Sobic009G255300 Sobic001G017900--Sobic010G036000 Sobic007G017400--Sobic007G156101 Sobic001G237700 Sobic001G237700 Sobic007G017400--Sobic001G237700 Sobic007G017400--Sobic002G337300 Sobic004G134500 Sobic004G134500 Sobic007G017400--Sobic004G134500 Sobic007G017400--Sobic003G267900 Sobic007G017400--Sobic001G017900 Sobic001G423700 Sobic001G423700 Sobic007G017400--Sobic001G423700 Sobic003G408800 Sobic003G408800 Sobic007G017400--Sobic003G408800 Sobic007G017400--Sobic007G159800 Sobic002G285300--Sobic004G284400 Sobic002G285300--Sobic003G397000 Sobic002G285300--Sobic001G017900 Sobic006G247500 Sobic006G247500 Sobic002G285300--Sobic006G247500 Sobic009G154000 Sobic009G154000 Sobic002G285300--Sobic009G154000 Sobic002G320200 Sobic002G320200 Sobic002G285300--Sobic002G320200 Sobic002G285300--Sobic010G036000 SobicK044200 SobicK044200 Sobic002G285300--SobicK044200 Sobic002G285300--Sobic006G192400 Sobic006G192400--Sobic001G017900 Sobic006G192400--Sobic002G285300 Sobic006G192400--Sobic003G267900 Sobic006G192400--Sobic004G284400 Sobic006G192400--Sobic003G397000 Sobic003G126500 Sobic003G126500 Sobic006G192400--Sobic003G126500 Sobic006G192400--Sobic006G157300 Sobic001G061500 Sobic001G061500 Sobic006G192400--Sobic001G061500 Sobic006G192400--Sobic007G156101 Sobic008G163700--Sobic001G017900 Sobic008G163700--Sobic002G285300 Sobic008G163700--Sobic007G159800 Sobic008G163700--Sobic007G156101 Sobic001G038500 Sobic001G038500 Sobic008G163700--Sobic001G038500 Sobic008G163700--Sobic009G255300 Sobic010G092100 Sobic010G092100 Sobic008G163700--Sobic010G092100 Sobic008G163700--Sobic007G017400 Sobic001G361900 Sobic001G361900 Sobic008G163700--Sobic001G361900 Sobic007G159800--Sobic001G038500 Sobic002G376800 Sobic002G376800 Sobic007G159800--Sobic002G376800 Sobic003G057800 Sobic003G057800 Sobic007G159800--Sobic003G057800 Sobic009G230400 Sobic009G230400 Sobic007G159800--Sobic009G230400 Sobic006G204200 Sobic006G204200 Sobic007G159800--Sobic006G204200 Sobic008G105500 Sobic008G105500 Sobic007G159800--Sobic008G105500 Sobic001G056300 Sobic001G056300 Sobic007G159800--Sobic001G056300 Sobic007G159800--Sobic008G163700 Sobic007G159800--Sobic010G092100 Sobic004G284400--Sobic002G285300 Sobic004G230900 Sobic004G230900 Sobic004G284400--Sobic004G230900 Sobic008G061000 Sobic008G061000 Sobic004G284400--Sobic008G061000 Sobic004G284400--Sobic009G154000 Sobic004G128600 Sobic004G128600 Sobic004G284400--Sobic004G128600 Sobic001G200500 Sobic001G200500 Sobic004G284400--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G284400--Sobic005G102100 Sobic001G193400 Sobic001G193400 Sobic004G284400--Sobic001G193400 Sobic008G133100 Sobic008G133100 Sobic004G284400--Sobic008G133100 Sobic002G337300--Sobic001G423700 Sobic002G337300--Sobic007G017400 Sobic007G050400 Sobic007G050400 Sobic002G337300--Sobic007G050400 Sobic002G337300--Sobic001G237700 Sobic002G337300--Sobic003G408800 Sobic002G297800 Sobic002G297800 Sobic002G337300--Sobic002G297800 Sobic002G337300--Sobic007G156101 Sobic003G176900 Sobic003G176900 Sobic002G337300--Sobic003G176900 Sobic002G337300--Sobic006G204200
Octagon: transcription factors


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