Gene annotation
Transcriptome id Sobic.003G267900.1
Synonym Sb03g032050, UGT88A1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
UniProt C5XHI6
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF260
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G16520 : UDP-glucosyl transferase 88A1
RAP-DB (Rice) LOC_Os01g50200.1 : UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042590 , Zm00025a023168 , Zm00025a044283 , Zm00025a044282 , Zm00025a036540 , Zm00025a027906 , Zm00025a016161 , Zm00025a034950
Brachypodium KQK05283 , PNT65068 , KQJ87942 , KQK05299 , KQJ87826 , KQK09613 , KQK09338 , KQK09339
Barley HORVU2Hr1G103980.1 , HORVU2Hr1G028580.3 , HORVU2Hr1G028580.2 , HORVU2Hr1G028580.1 , HORVU2Hr1G028580.4 , HORVU1Hr1G081890.2 , HORVU1Hr1G081890.1 , HORVU7Hr1G029600.2 , HORVU7Hr1G029600.1 , HORVU7Hr1G029630.3 , HORVU7Hr1G029630.2 , HORVU7Hr1G029630.1 , HORVU4Hr1G079520.1 , HORVU1Hr1G081940.1 , HORVU5Hr1G110440.1
Wheat TraesCS5D02G473600 , TraesCS7A02G144100 , TraesCS4A02G279400 , TraesCS2A02G562000 , TraesCS3B02G282600 , TraesCS4B02G033000 , TraesCS7A02G086800 , TraesCS4D02G031500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G156101 - -
2 Sobic.002G285300 "domain confirmed by Pfam database, expression supported by NCBI EST database"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsSAUR53 - Auxin-responsive SAUR gene family member, expressed -
3 Sobic.001G017900 FAD binding protein, putative, expressed -
4 Sobic.006G192400 U-box domain-containing protein, putative, expressed -
5 Sobic.004G284400 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -
6 Sobic.007G017400 APOBEC1 complementation factor, putative, expressed K13161: heterogeneous nuclear ribonucleoprotein R
7 Sobic.010G036000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.008G163700 helix-loop-helix DNA-binding domain containing protein, expressed K16189: phytochrome-interacting factor 4
9 Sobic.003G397000 expressed protein -
10 Sobic.004G310700 glutaredoxin 2, putative, expressed -
11 Sobic.006G157300 expressed protein -
12 Sobic.007G131900 expressed protein -
13 Sobic.004G230900 RNA recognition motif containing protein, putative, expressed -
14 Sobic.004G066000 expressed protein -
15 Sobic.009G154000 ATOFP18/OFP18, putative, expressed -
16 Sobic.003G179100 protein binding protein, putative, expressed K12821: PRPF40, pre-mRNA-processing factor 40
17 Sobic.009G255300 OsClp8 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
18 Sobic.001G061500 ubiquitin-conjugating enzyme, putative, expressed K10573: UBE2A, UBC2, ubiquitin-conjugating enzyme E2 A
19 Sobic.010G095500 NHL repeat-containing protein, putative, expressed -
20 Sobic.006G169400 expressed protein -


Gene co-expression network
sample Sobic003G267900 Sobic003G267900 Sobic007G156101 Sobic007G156101 Sobic003G267900--Sobic007G156101 Sobic002G285300 Sobic002G285300 Sobic003G267900--Sobic002G285300 Sobic001G017900 Sobic001G017900 Sobic003G267900--Sobic001G017900 Sobic006G192400 Sobic006G192400 Sobic003G267900--Sobic006G192400 Sobic004G284400 Sobic004G284400 Sobic003G267900--Sobic004G284400 Sobic007G017400 Sobic007G017400 Sobic003G267900--Sobic007G017400 Sobic010G036000 Sobic010G036000 Sobic003G267900--Sobic010G036000 Sobic008G163700 Sobic008G163700 Sobic003G267900--Sobic008G163700 Sobic003G397000 Sobic003G397000 Sobic003G267900--Sobic003G397000 Sobic007G156101--Sobic003G267900 Sobic007G156101--Sobic001G017900 Sobic007G156101--Sobic007G017400 Sobic007G156101--Sobic002G285300 Sobic007G156101--Sobic006G192400 Sobic007G156101--Sobic008G163700 Sobic007G159800 Sobic007G159800 Sobic007G156101--Sobic007G159800 Sobic007G156101--Sobic004G284400 Sobic002G337300 Sobic002G337300 Sobic007G156101--Sobic002G337300 Sobic002G285300--Sobic004G284400 Sobic002G285300--Sobic003G397000 Sobic002G285300--Sobic001G017900 Sobic006G247500 Sobic006G247500 Sobic002G285300--Sobic006G247500 Sobic009G154000 Sobic009G154000 Sobic002G285300--Sobic009G154000 Sobic002G320200 Sobic002G320200 Sobic002G285300--Sobic002G320200 Sobic002G285300--Sobic010G036000 SobicK044200 SobicK044200 Sobic002G285300--SobicK044200 Sobic002G285300--Sobic006G192400 Sobic001G017900--Sobic006G192400 Sobic001G017900--Sobic002G285300 Sobic001G017900--Sobic008G163700 Sobic001G017900--Sobic007G156101 Sobic001G017900--Sobic003G267900 Sobic006G157300 Sobic006G157300 Sobic001G017900--Sobic006G157300 Sobic001G017900--Sobic004G284400 Sobic009G255300 Sobic009G255300 Sobic001G017900--Sobic009G255300 Sobic001G017900--Sobic010G036000 Sobic006G192400--Sobic001G017900 Sobic006G192400--Sobic002G285300 Sobic006G192400--Sobic003G267900 Sobic006G192400--Sobic004G284400 Sobic006G192400--Sobic003G397000 Sobic003G126500 Sobic003G126500 Sobic006G192400--Sobic003G126500 Sobic006G192400--Sobic006G157300 Sobic001G061500 Sobic001G061500 Sobic006G192400--Sobic001G061500 Sobic006G192400--Sobic007G156101 Sobic004G284400--Sobic002G285300 Sobic004G230900 Sobic004G230900 Sobic004G284400--Sobic004G230900 Sobic008G061000 Sobic008G061000 Sobic004G284400--Sobic008G061000 Sobic004G284400--Sobic009G154000 Sobic004G128600 Sobic004G128600 Sobic004G284400--Sobic004G128600 Sobic001G200500 Sobic001G200500 Sobic004G284400--Sobic001G200500 Sobic005G102100 Sobic005G102100 Sobic004G284400--Sobic005G102100 Sobic001G193400 Sobic001G193400 Sobic004G284400--Sobic001G193400 Sobic008G133100 Sobic008G133100 Sobic004G284400--Sobic008G133100 Sobic007G017400--Sobic007G156101 Sobic001G237700 Sobic001G237700 Sobic007G017400--Sobic001G237700 Sobic007G017400--Sobic002G337300 Sobic004G134500 Sobic004G134500 Sobic007G017400--Sobic004G134500 Sobic007G017400--Sobic003G267900 Sobic007G017400--Sobic001G017900 Sobic001G423700 Sobic001G423700 Sobic007G017400--Sobic001G423700 Sobic003G408800 Sobic003G408800 Sobic007G017400--Sobic003G408800 Sobic007G017400--Sobic007G159800 Sobic003G179100 Sobic003G179100 Sobic010G036000--Sobic003G179100 Sobic002G284901 Sobic002G284901 Sobic010G036000--Sobic002G284901 Sobic010G073300 Sobic010G073300 Sobic010G036000--Sobic010G073300 Sobic001G525000 Sobic001G525000 Sobic010G036000--Sobic001G525000 Sobic002G430200 Sobic002G430200 Sobic010G036000--Sobic002G430200 Sobic003G120400 Sobic003G120400 Sobic010G036000--Sobic003G120400 Sobic002G387100 Sobic002G387100 Sobic010G036000--Sobic002G387100 Sobic002G320900 Sobic002G320900 Sobic010G036000--Sobic002G320900 Sobic006G065700 Sobic006G065700 Sobic010G036000--Sobic006G065700 Sobic008G163700--Sobic001G017900 Sobic008G163700--Sobic002G285300 Sobic008G163700--Sobic007G159800 Sobic008G163700--Sobic007G156101 Sobic001G038500 Sobic001G038500 Sobic008G163700--Sobic001G038500 Sobic008G163700--Sobic009G255300 Sobic010G092100 Sobic010G092100 Sobic008G163700--Sobic010G092100 Sobic008G163700--Sobic007G017400 Sobic001G361900 Sobic001G361900 Sobic008G163700--Sobic001G361900 Sobic003G397000--Sobic002G320200 Sobic008G031600 Sobic008G031600 Sobic003G397000--Sobic008G031600 Sobic001G460700 Sobic001G460700 Sobic003G397000--Sobic001G460700 Sobic003G081400 Sobic003G081400 Sobic003G397000--Sobic003G081400 Sobic003G397000--Sobic002G285300 Sobic010G068300 Sobic010G068300 Sobic003G397000--Sobic010G068300 Sobic006G167200 Sobic006G167200 Sobic003G397000--Sobic006G167200 Sobic001G084500 Sobic001G084500 Sobic003G397000--Sobic001G084500 Sobic010G029200 Sobic010G029200 Sobic003G397000--Sobic010G029200
Octagon: transcription factors


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