Gene annotation
Transcriptome id Sobic.002G229800.2
Synonym Sb02g026900
Functional annotation DUF617 domain containing protein, expressed
UniProt A0A1W0W5E3
Pfam PF04759
Panther DB PTHR31696 PTHR31696:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42680 : Protein of unknown function, DUF617
RAP-DB (Rice) LOC_Os09g28880.1 : DUF617 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047305
Brachypodium KQJ95214 , KQK18432 , KQJ90555
Barley HORVU5Hr1G069510.1 , HORVU0Hr1G014500.2 , HORVU0Hr1G014500.3 , HORVU0Hr1G014500.1 , HORVU0Hr1G014500.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G278800 expressed protein -
2 Sobic.004G155900 heavy metal-associated domain containing protein, expressed -
3 Sobic.006G108000 formin, putative, expressed -
4 Sobic.001G474300 expressed protein -
5 Sobic.010G191100 helix-loop-helix DNA-binding, putative, expressed -
6 Sobic.004G336700 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.008G145300 BTBN24 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
8 Sobic.009G254400 polygalacturonase inhibitor 1 precursor, putative, expressed -
9 Sobic.003G301200 expressed protein -
10 Sobic.003G282600 glycosyl transferase 8 domain containing protein, putative, expressed -
11 Sobic.001G273100 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.002G202500 spotted leaf 11, putative, expressed -
13 Sobic.008G137500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.007G068500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
15 Sobic.006G163600 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.002G221400 ZOS9-14 - C2H2 zinc finger protein, expressed -
17 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor
18 Sobic.007G019600 expressed protein -
19 Sobic.001G331100 expressed protein -
20 Sobic.009G070500 uncharacterized protein At4g06744 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G229800 Sobic002G229800 Sobic006G278800 Sobic006G278800 Sobic002G229800--Sobic006G278800 Sobic004G155900 Sobic004G155900 Sobic002G229800--Sobic004G155900 Sobic006G108000 Sobic006G108000 Sobic002G229800--Sobic006G108000 Sobic001G474300 Sobic001G474300 Sobic002G229800--Sobic001G474300 Sobic010G191100 Sobic010G191100 Sobic002G229800--Sobic010G191100 Sobic004G336700 Sobic004G336700 Sobic002G229800--Sobic004G336700 Sobic008G145300 Sobic008G145300 Sobic002G229800--Sobic008G145300 Sobic009G254400 Sobic009G254400 Sobic002G229800--Sobic009G254400 Sobic003G301200 Sobic003G301200 Sobic002G229800--Sobic003G301200 Sobic006G278800--Sobic002G229800 Sobic006G278800--Sobic004G155900 Sobic004G059100 Sobic004G059100 Sobic006G278800--Sobic004G059100 Sobic002G306300 Sobic002G306300 Sobic006G278800--Sobic002G306300 Sobic006G278800--Sobic001G474300 Sobic006G278800--Sobic008G145300 Sobic006G278800--Sobic006G108000 Sobic002G348700 Sobic002G348700 Sobic006G278800--Sobic002G348700 Sobic006G278800--Sobic009G254400 Sobic003G235800 Sobic003G235800 Sobic004G155900--Sobic003G235800 Sobic004G155900--Sobic003G301200 Sobic004G155900--Sobic010G191100 Sobic002G416000 Sobic002G416000 Sobic004G155900--Sobic002G416000 Sobic004G155900--Sobic002G229800 Sobic008G137500 Sobic008G137500 Sobic004G155900--Sobic008G137500 Sobic007G081300 Sobic007G081300 Sobic004G155900--Sobic007G081300 Sobic010G189800 Sobic010G189800 Sobic004G155900--Sobic010G189800 Sobic006G278400 Sobic006G278400 Sobic004G155900--Sobic006G278400 Sobic003G406500 Sobic003G406500 Sobic006G108000--Sobic003G406500 Sobic001G331100 Sobic001G331100 Sobic006G108000--Sobic001G331100 Sobic004G115600 Sobic004G115600 Sobic006G108000--Sobic004G115600 Sobic008G163800 Sobic008G163800 Sobic006G108000--Sobic008G163800 Sobic006G245200 Sobic006G245200 Sobic006G108000--Sobic006G245200 Sobic002G221400 Sobic002G221400 Sobic006G108000--Sobic002G221400 Sobic006G108000--Sobic009G254400 Sobic003G040100 Sobic003G040100 Sobic006G108000--Sobic003G040100 Sobic007G153300 Sobic007G153300 Sobic006G108000--Sobic007G153300 Sobic003G282600 Sobic003G282600 Sobic001G474300--Sobic003G282600 Sobic007G165800 Sobic007G165800 Sobic001G474300--Sobic007G165800 Sobic001G474300--Sobic002G229800 Sobic001G518000 Sobic001G518000 Sobic001G474300--Sobic001G518000 Sobic010G014500 Sobic010G014500 Sobic001G474300--Sobic010G014500 Sobic009G173200 Sobic009G173200 Sobic001G474300--Sobic009G173200 Sobic010G077000 Sobic010G077000 Sobic001G474300--Sobic010G077000 Sobic003G325400 Sobic003G325400 Sobic001G474300--Sobic003G325400 Sobic001G439800 Sobic001G439800 Sobic001G474300--Sobic001G439800 Sobic010G191100--Sobic008G137500 Sobic010G191100--Sobic004G155900 Sobic009G070500 Sobic009G070500 Sobic010G191100--Sobic009G070500 Sobic002G154300 Sobic002G154300 Sobic010G191100--Sobic002G154300 Sobic006G163600 Sobic006G163600 Sobic010G191100--Sobic006G163600 Sobic010G246500 Sobic010G246500 Sobic010G191100--Sobic010G246500 Sobic010G191100--Sobic003G301200 Sobic010G191100--Sobic002G229800 Sobic001G273100 Sobic001G273100 Sobic010G191100--Sobic001G273100 Sobic002G202500 Sobic002G202500 Sobic004G336700--Sobic002G202500 Sobic001G265300 Sobic001G265300 Sobic004G336700--Sobic001G265300 Sobic010G209800 Sobic010G209800 Sobic004G336700--Sobic010G209800 Sobic004G336700--Sobic001G273100 Sobic002G412400 Sobic002G412400 Sobic004G336700--Sobic002G412400 Sobic004G336700--Sobic002G229800 Sobic004G336700--Sobic006G108000 Sobic004G336700--Sobic003G406500 Sobic004G336700--Sobic006G163600 Sobic003G183800 Sobic003G183800 Sobic008G145300--Sobic003G183800 Sobic008G145300--Sobic002G306300 Sobic008G145300--Sobic002G229800 Sobic007G113900 Sobic007G113900 Sobic008G145300--Sobic007G113900 Sobic008G145300--Sobic004G336700 Sobic001G441700 Sobic001G441700 Sobic008G145300--Sobic001G441700 Sobic004G205500 Sobic004G205500 Sobic008G145300--Sobic004G205500 Sobic005G169700 Sobic005G169700 Sobic008G145300--Sobic005G169700 Sobic003G174900 Sobic003G174900 Sobic008G145300--Sobic003G174900 Sobic001G263500 Sobic001G263500 Sobic009G254400--Sobic001G263500 Sobic009G254400--Sobic003G406500 Sobic009G254400--Sobic008G163800 Sobic002G330800 Sobic002G330800 Sobic009G254400--Sobic002G330800 Sobic009G254400--Sobic001G331100 Sobic010G179000 Sobic010G179000 Sobic009G254400--Sobic010G179000 Sobic009G254400--Sobic006G108000 Sobic009G254400--Sobic006G278400 Sobic006G079100 Sobic006G079100 Sobic009G254400--Sobic006G079100 Sobic003G301200--Sobic007G081300 Sobic003G301200--Sobic006G278400 Sobic003G301200--Sobic003G235800 Sobic001G180300 Sobic001G180300 Sobic003G301200--Sobic001G180300 Sobic004G227000 Sobic004G227000 Sobic003G301200--Sobic004G227000 Sobic003G301200--Sobic010G189800 Sobic008G163600 Sobic008G163600 Sobic003G301200--Sobic008G163600 Sobic006G005000 Sobic006G005000 Sobic003G301200--Sobic006G005000 Sobic006G187600 Sobic006G187600 Sobic003G301200--Sobic006G187600
Octagon: transcription factors


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