Gene annotation
Transcriptome id Sobic.003G420201.1
Synonym -
Functional annotation -
UniProt A0A1B6Q829
Pfam -
Panther DB PTHR36795 PTHR36795:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G14410 : -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a026090 , Zm00025a039170
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
2 Sobic.002G039600 - -
3 Sobic.004G205500 expressed protein -
4 Sobic.004G240900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
5 Sobic.003G204000 expressed protein -
6 Sobic.008G167300 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.006G139300 plant protein of unknown function DUF869 domain containing protein, expressed -
8 Sobic.006G269600 zinc finger, RING-type, putative, expressed -
9 Sobic.007G099500 hypothetical protein -
10 Sobic.002G297800 growth regulating factor protein, putative, expressed -
11 Sobic.009G059600 KIP1, putative, expressed -
12 Sobic.004G016500 PPR repeat domain containing protein, putative, expressed -
13 Sobic.003G424100 sulfotransferase domain containing protein, expressed -
14 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
15 Sobic.002G090400 polygalacturonase, putative, expressed -
16 Sobic.001G422366 - -
17 Sobic.001G024200 lipase class 3 family protein, putative, expressed -
18 Sobic.004G169501 - -
19 Sobic.001G046600 cycloartenol-C-24-methyltransferase 1, putative, expressed -
20 Sobic.003G185250 - -


Gene co-expression network
sample Sobic003G420201 Sobic003G420201 Sobic004G193800 Sobic004G193800 Sobic003G420201--Sobic004G193800 Sobic002G039600 Sobic002G039600 Sobic003G420201--Sobic002G039600 Sobic004G205500 Sobic004G205500 Sobic003G420201--Sobic004G205500 Sobic004G240900 Sobic004G240900 Sobic003G420201--Sobic004G240900 Sobic003G204000 Sobic003G204000 Sobic003G420201--Sobic003G204000 Sobic008G167300 Sobic008G167300 Sobic003G420201--Sobic008G167300 Sobic006G139300 Sobic006G139300 Sobic003G420201--Sobic006G139300 Sobic006G269600 Sobic006G269600 Sobic003G420201--Sobic006G269600 Sobic007G099500 Sobic007G099500 Sobic003G420201--Sobic007G099500 Sobic003G185250 Sobic003G185250 Sobic004G193800--Sobic003G185250 Sobic004G016500 Sobic004G016500 Sobic004G193800--Sobic004G016500 Sobic003G424100 Sobic003G424100 Sobic004G193800--Sobic003G424100 Sobic008G068800 Sobic008G068800 Sobic004G193800--Sobic008G068800 Sobic004G193800--Sobic007G099500 Sobic003G023400 Sobic003G023400 Sobic004G193800--Sobic003G023400 Sobic004G193800--Sobic004G240900 Sobic010G208500 Sobic010G208500 Sobic004G193800--Sobic010G208500 Sobic004G169501 Sobic004G169501 Sobic004G193800--Sobic004G169501 Sobic009G257300 Sobic009G257300 Sobic002G039600--Sobic009G257300 Sobic002G221700 Sobic002G221700 Sobic002G039600--Sobic002G221700 Sobic001G345333 Sobic001G345333 Sobic002G039600--Sobic001G345333 Sobic002G108800 Sobic002G108800 Sobic002G039600--Sobic002G108800 Sobic008G157950 Sobic008G157950 Sobic002G039600--Sobic008G157950 Sobic002G007250 Sobic002G007250 Sobic002G039600--Sobic002G007250 Sobic002G283300 Sobic002G283300 Sobic002G039600--Sobic002G283300 Sobic002G039600--Sobic003G204000 Sobic004G212800 Sobic004G212800 Sobic002G039600--Sobic004G212800 Sobic004G154600 Sobic004G154600 Sobic004G205500--Sobic004G154600 Sobic004G199700 Sobic004G199700 Sobic004G205500--Sobic004G199700 Sobic003G174900 Sobic003G174900 Sobic004G205500--Sobic003G174900 Sobic004G205500--Sobic003G420201 Sobic007G210900 Sobic007G210900 Sobic004G205500--Sobic007G210900 Sobic002G367300 Sobic002G367300 Sobic004G205500--Sobic002G367300 Sobic002G348700 Sobic002G348700 Sobic004G205500--Sobic002G348700 Sobic006G248300 Sobic006G248300 Sobic004G205500--Sobic006G248300 Sobic008G086200 Sobic008G086200 Sobic004G205500--Sobic008G086200 Sobic004G240900--Sobic003G424100 Sobic006G133600 Sobic006G133600 Sobic004G240900--Sobic006G133600 Sobic001G046600 Sobic001G046600 Sobic004G240900--Sobic001G046600 Sobic004G240900--Sobic007G099500 Sobic004G240900--Sobic004G016500 Sobic009G059600 Sobic009G059600 Sobic004G240900--Sobic009G059600 Sobic003G029300 Sobic003G029300 Sobic004G240900--Sobic003G029300 Sobic004G240900--Sobic004G193800 Sobic004G164600 Sobic004G164600 Sobic004G240900--Sobic004G164600 Sobic001G024200 Sobic001G024200 Sobic003G204000--Sobic001G024200 Sobic003G204000--Sobic008G068800 Sobic003G204000--Sobic004G212800 Sobic008G116500 Sobic008G116500 Sobic003G204000--Sobic008G116500 Sobic003G204000--Sobic004G169501 Sobic001G543900 Sobic001G543900 Sobic003G204000--Sobic001G543900 Sobic004G112500 Sobic004G112500 Sobic003G204000--Sobic004G112500 Sobic002G297800 Sobic002G297800 Sobic003G204000--Sobic002G297800 Sobic003G315332 Sobic003G315332 Sobic003G204000--Sobic003G315332 Sobic008G167300--Sobic004G212800 Sobic008G167300--Sobic004G016500 Sobic008G167300--Sobic001G046600 Sobic008G167300--Sobic001G024200 Sobic008G161401 Sobic008G161401 Sobic008G167300--Sobic008G161401 Sobic008G167300--Sobic004G164600 Sobic008G167300--Sobic004G112500 Sobic008G167300--Sobic002G007250 Sobic008G167300--Sobic003G424100 Sobic003G020300 Sobic003G020300 Sobic006G139300--Sobic003G020300 Sobic006G139300--Sobic003G420201 Sobic006G046500 Sobic006G046500 Sobic006G139300--Sobic006G046500 Sobic005G088500 Sobic005G088500 Sobic006G139300--Sobic005G088500 Sobic008G114600 Sobic008G114600 Sobic006G139300--Sobic008G114600 Sobic007G033300 Sobic007G033300 Sobic006G139300--Sobic007G033300 Sobic005G135700 Sobic005G135700 Sobic006G139300--Sobic005G135700 Sobic009G056400 Sobic009G056400 Sobic006G139300--Sobic009G056400 Sobic004G066100 Sobic004G066100 Sobic006G139300--Sobic004G066100 Sobic004G289500 Sobic004G289500 Sobic006G269600--Sobic004G289500 Sobic002G073300 Sobic002G073300 Sobic006G269600--Sobic002G073300 Sobic002G177400 Sobic002G177400 Sobic006G269600--Sobic002G177400 Sobic002G050500 Sobic002G050500 Sobic006G269600--Sobic002G050500 Sobic006G269600--Sobic009G059600 Sobic006G210200 Sobic006G210200 Sobic006G269600--Sobic006G210200 Sobic006G269600--Sobic003G420201 Sobic010G139301 Sobic010G139301 Sobic006G269600--Sobic010G139301 Sobic004G088400 Sobic004G088400 Sobic006G269600--Sobic004G088400 Sobic007G099500--Sobic009G059600 Sobic007G099500--Sobic004G164600 Sobic002G090400 Sobic002G090400 Sobic007G099500--Sobic002G090400 Sobic007G073400 Sobic007G073400 Sobic007G099500--Sobic007G073400 Sobic007G099500--Sobic003G424100 Sobic007G099500--Sobic004G240900 Sobic008G031350 Sobic008G031350 Sobic007G099500--Sobic008G031350 Sobic007G099500--Sobic004G212800 Sobic007G099500--Sobic002G221700
Octagon: transcription factors


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