Gene annotation
Transcriptome id Sobic.003G020300.1
Synonym Sb03g001830, ARAB-1
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1B6Q0X5
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF280
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G28670 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g11750.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G027990.4 , HORVU3Hr1G027990.5 , HORVU3Hr1G027990.1 , HORVU3Hr1G027990.3
Wheat TraesCS3B02G163200 , TraesCS2A02G543700 , TraesCS3A02G141400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G139300 plant protein of unknown function DUF869 domain containing protein, expressed -
2 Sobic.008G114600 - -
3 Sobic.006G046500 deoxyhypusine synthase, putative, expressed K00809: DHPS, deoxyhypusine synthase
4 Sobic.005G088500 integral membrane protein DUF6 containing protein, expressed -
5 Sobic.003G420201 - -
6 Sobic.004G066100 OsFBX85 - F-box domain containing protein, expressed -
7 Sobic.007G033300 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.005G135700 chalcone and stilbene synthases, putative, expressed -
9 Sobic.006G245300 expressed protein -
10 Sobic.001G050300 LTPL83 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
11 Sobic.009G109850 - -
12 Sobic.009G056400 fasciclin domain containing protein, expressed -
13 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
14 Sobic.008G107100 cytochrome P450, putative, expressed -
15 Sobic.007G154800 bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
16 Sobic.009G034500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.002G394700 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.004G193800 hydrolase, alpha/beta fold family domain containing protein, expressed K14759: isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase
19 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
20 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic003G020300 Sobic003G020300 Sobic006G139300 Sobic006G139300 Sobic003G020300--Sobic006G139300 Sobic008G114600 Sobic008G114600 Sobic003G020300--Sobic008G114600 Sobic006G046500 Sobic006G046500 Sobic003G020300--Sobic006G046500 Sobic005G088500 Sobic005G088500 Sobic003G020300--Sobic005G088500 Sobic003G420201 Sobic003G420201 Sobic003G020300--Sobic003G420201 Sobic004G066100 Sobic004G066100 Sobic003G020300--Sobic004G066100 Sobic007G033300 Sobic007G033300 Sobic003G020300--Sobic007G033300 Sobic005G135700 Sobic005G135700 Sobic003G020300--Sobic005G135700 Sobic006G245300 Sobic006G245300 Sobic003G020300--Sobic006G245300 Sobic006G139300--Sobic003G020300 Sobic006G139300--Sobic003G420201 Sobic006G139300--Sobic006G046500 Sobic006G139300--Sobic005G088500 Sobic006G139300--Sobic008G114600 Sobic006G139300--Sobic007G033300 Sobic006G139300--Sobic005G135700 Sobic009G056400 Sobic009G056400 Sobic006G139300--Sobic009G056400 Sobic006G139300--Sobic004G066100 Sobic008G114600--Sobic003G020300 Sobic008G114600--Sobic006G139300 Sobic008G114600--Sobic003G420201 Sobic008G114600--Sobic004G066100 Sobic008G114600--Sobic007G033300 Sobic010G073600 Sobic010G073600 Sobic008G114600--Sobic010G073600 Sobic008G114600--Sobic006G046500 Sobic004G193800 Sobic004G193800 Sobic008G114600--Sobic004G193800 Sobic008G114600--Sobic006G245300 Sobic006G046500--Sobic005G088500 Sobic006G046500--Sobic003G020300 Sobic006G046500--Sobic005G135700 Sobic009G109850 Sobic009G109850 Sobic006G046500--Sobic009G109850 Sobic010G108200 Sobic010G108200 Sobic006G046500--Sobic010G108200 Sobic002G394700 Sobic002G394700 Sobic006G046500--Sobic002G394700 Sobic006G046500--Sobic006G245300 Sobic001G147650 Sobic001G147650 Sobic006G046500--Sobic001G147650 Sobic003G071300 Sobic003G071300 Sobic006G046500--Sobic003G071300 Sobic002G039400 Sobic002G039400 Sobic005G088500--Sobic002G039400 Sobic005G088500--Sobic005G135700 Sobic005G088500--Sobic002G394700 Sobic005G088500--Sobic006G046500 Sobic005G088500--Sobic010G108200 Sobic005G088500--Sobic009G109850 Sobic001G510200 Sobic001G510200 Sobic005G088500--Sobic001G510200 Sobic006G125600 Sobic006G125600 Sobic005G088500--Sobic006G125600 Sobic005G088500--Sobic003G071300 Sobic003G420201--Sobic004G193800 Sobic002G039600 Sobic002G039600 Sobic003G420201--Sobic002G039600 Sobic004G205500 Sobic004G205500 Sobic003G420201--Sobic004G205500 Sobic004G240900 Sobic004G240900 Sobic003G420201--Sobic004G240900 Sobic003G204000 Sobic003G204000 Sobic003G420201--Sobic003G204000 Sobic008G167300 Sobic008G167300 Sobic003G420201--Sobic008G167300 Sobic003G420201--Sobic006G139300 Sobic006G269600 Sobic006G269600 Sobic003G420201--Sobic006G269600 Sobic007G099500 Sobic007G099500 Sobic003G420201--Sobic007G099500 Sobic004G066100--Sobic003G020300 Sobic004G066100--Sobic006G139300 Sobic004G286900 Sobic004G286900 Sobic004G066100--Sobic004G286900 Sobic010G173900 Sobic010G173900 Sobic004G066100--Sobic010G173900 Sobic002G070000 Sobic002G070000 Sobic004G066100--Sobic002G070000 Sobic010G046400 Sobic010G046400 Sobic004G066100--Sobic010G046400 Sobic004G066100--Sobic008G114600 Sobic004G066100--Sobic003G420201 Sobic010G123500 Sobic010G123500 Sobic004G066100--Sobic010G123500 Sobic005G146300 Sobic005G146300 Sobic007G033300--Sobic005G146300 Sobic003G430000 Sobic003G430000 Sobic007G033300--Sobic003G430000 Sobic003G183800 Sobic003G183800 Sobic007G033300--Sobic003G183800 Sobic001G441700 Sobic001G441700 Sobic007G033300--Sobic001G441700 Sobic007G033300--Sobic006G139300 Sobic007G033300--Sobic003G020300 Sobic007G033300--Sobic002G039400 Sobic007G033300--Sobic005G088500 Sobic004G341300 Sobic004G341300 Sobic007G033300--Sobic004G341300 Sobic005G135700--Sobic005G088500 Sobic010G108301 Sobic010G108301 Sobic005G135700--Sobic010G108301 Sobic005G135700--Sobic002G394700 Sobic002G267000 Sobic002G267000 Sobic005G135700--Sobic002G267000 Sobic007G138800 Sobic007G138800 Sobic005G135700--Sobic007G138800 Sobic010G108600 Sobic010G108600 Sobic005G135700--Sobic010G108600 Sobic005G135700--Sobic010G108200 Sobic001G173100 Sobic001G173100 Sobic005G135700--Sobic001G173100 Sobic005G135700--Sobic006G125600 Sobic006G245300--Sobic006G046500 Sobic004G220300 Sobic004G220300 Sobic006G245300--Sobic004G220300 Sobic009G175200 Sobic009G175200 Sobic006G245300--Sobic009G175200 Sobic006G245300--Sobic003G020300 Sobic003G375000 Sobic003G375000 Sobic006G245300--Sobic003G375000 Sobic006G245300--Sobic006G139300 Sobic008G086200 Sobic008G086200 Sobic006G245300--Sobic008G086200 Sobic006G245300--Sobic005G088500 Sobic006G245300--Sobic003G183800
Octagon: transcription factors


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