Gene annotation
Transcriptome id Sobic.008G055000.1
Synonym
Functional annotation -
UniProt A0A1B6PBV7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22680 : -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a025722
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G001900 harpin-induced protein 1 domain containing protein, expressed -
2 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
3 Sobic.003G098500 - -
4 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
5 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
6 Sobic.010G196400 expressed protein -
7 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
9 Sobic.003G085200 expressed protein -
10 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
12 Sobic.002G276600 endoglucanase, putative, expressed -
13 Sobic.006G083700 expressed protein -
14 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
16 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
17 Sobic.001G534532 - -
18 Sobic.008G059800 expressed protein -
19 Sobic.009G162800 laccase precursor protein, putative, expressed K05909: laccase
20 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -


Gene co-expression network
sample Sobic008G055000 Sobic008G055000 Sobic007G001900 Sobic007G001900 Sobic008G055000--Sobic007G001900 Sobic009G226900 Sobic009G226900 Sobic008G055000--Sobic009G226900 Sobic003G098500 Sobic003G098500 Sobic008G055000--Sobic003G098500 Sobic004G168700 Sobic004G168700 Sobic008G055000--Sobic004G168700 Sobic005G087200 Sobic005G087200 Sobic008G055000--Sobic005G087200 Sobic010G196400 Sobic010G196400 Sobic008G055000--Sobic010G196400 Sobic008G112200 Sobic008G112200 Sobic008G055000--Sobic008G112200 Sobic010G199700 Sobic010G199700 Sobic008G055000--Sobic010G199700 Sobic003G085200 Sobic003G085200 Sobic008G055000--Sobic003G085200 Sobic010G112800 Sobic010G112800 Sobic007G001900--Sobic010G112800 Sobic009G144200 Sobic009G144200 Sobic007G001900--Sobic009G144200 Sobic002G276600 Sobic002G276600 Sobic007G001900--Sobic002G276600 Sobic007G001900--Sobic008G055000 Sobic010G090500 Sobic010G090500 Sobic007G001900--Sobic010G090500 Sobic007G001900--Sobic009G226900 Sobic004G243800 Sobic004G243800 Sobic007G001900--Sobic004G243800 Sobic001G316000 Sobic001G316000 Sobic007G001900--Sobic001G316000 Sobic007G001900--Sobic003G098500 Sobic003G062000 Sobic003G062000 Sobic009G226900--Sobic003G062000 Sobic001G224300 Sobic001G224300 Sobic009G226900--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic006G036400 Sobic006G036400 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000 Sobic003G098500--Sobic002G276600 Sobic001G099100 Sobic001G099100 Sobic003G098500--Sobic001G099100 Sobic003G098500--Sobic009G226900 Sobic009G026101 Sobic009G026101 Sobic003G098500--Sobic009G026101 Sobic003G098500--Sobic008G055000 Sobic008G174900 Sobic008G174900 Sobic003G098500--Sobic008G174900 Sobic006G267500 Sobic006G267500 Sobic003G098500--Sobic006G267500 Sobic009G061000 Sobic009G061000 Sobic003G098500--Sobic009G061000 Sobic009G153800 Sobic009G153800 Sobic003G098500--Sobic009G153800 Sobic010G086800 Sobic010G086800 Sobic004G168700--Sobic010G086800 Sobic009G032600 Sobic009G032600 Sobic004G168700--Sobic009G032600 Sobic009G232200 Sobic009G232200 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic009G211800 Sobic009G211800 Sobic004G168700--Sobic009G211800 Sobic002G072200 Sobic002G072200 Sobic004G168700--Sobic002G072200 Sobic004G168700--Sobic004G243800 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic005G087200--Sobic003G387500 Sobic005G087200--Sobic009G226900 Sobic002G164600 Sobic002G164600 Sobic005G087200--Sobic002G164600 Sobic003G236701 Sobic003G236701 Sobic005G087200--Sobic003G236701 Sobic003G112200 Sobic003G112200 Sobic005G087200--Sobic003G112200 Sobic001G336700 Sobic001G336700 Sobic005G087200--Sobic001G336700 Sobic005G087200--Sobic001G406700 Sobic009G241600 Sobic009G241600 Sobic005G087200--Sobic009G241600 Sobic005G087200--Sobic008G112200 Sobic009G162800 Sobic009G162800 Sobic010G196400--Sobic009G162800 Sobic001G066900 Sobic001G066900 Sobic010G196400--Sobic001G066900 Sobic001G265900 Sobic001G265900 Sobic010G196400--Sobic001G265900 Sobic006G166800 Sobic006G166800 Sobic010G196400--Sobic006G166800 Sobic001G307300 Sobic001G307300 Sobic010G196400--Sobic001G307300 Sobic003G153400 Sobic003G153400 Sobic010G196400--Sobic003G153400 Sobic001G275600 Sobic001G275600 Sobic010G196400--Sobic001G275600 Sobic009G151000 Sobic009G151000 Sobic010G196400--Sobic009G151000 Sobic001G250200 Sobic001G250200 Sobic010G196400--Sobic001G250200 Sobic008G112200--Sobic010G199700 Sobic008G112200--Sobic009G241600 Sobic008G059800 Sobic008G059800 Sobic008G112200--Sobic008G059800 Sobic008G112200--Sobic001G066900 Sobic008G112200--Sobic003G236701 Sobic008G112200--Sobic009G153800 Sobic001G468300 Sobic001G468300 Sobic008G112200--Sobic001G468300 Sobic008G112200--Sobic002G164600 Sobic008G112200--Sobic009G226900 Sobic010G199700--Sobic009G241600 Sobic010G199700--Sobic008G112200 Sobic007G027200 Sobic007G027200 Sobic010G199700--Sobic007G027200 Sobic010G199700--Sobic008G059800 Sobic010G199700--Sobic003G153400 Sobic010G199700--Sobic001G468300 Sobic010G199700--Sobic003G236701 Sobic010G199700--Sobic006G166800 Sobic010G199700--Sobic009G153800 Sobic003G085200--Sobic010G196400 Sobic003G085200--Sobic009G162800 Sobic003G085200--Sobic001G307300 Sobic003G085200--Sobic001G250200 Sobic003G085200--Sobic003G108000 Sobic009G119400 Sobic009G119400 Sobic003G085200--Sobic009G119400 Sobic003G085200--Sobic006G166800 Sobic003G352800 Sobic003G352800 Sobic003G085200--Sobic003G352800 Sobic003G085200--Sobic001G265900
Octagon: transcription factors


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