Gene annotation
Transcriptome id Sobic.003G021800.2
Synonym Sb03g002050, BZIP61, ATBZIP61
Functional annotation down-regulated TF in developmental senescence (PubMedID : 27586543)
bZIP transcription factor domain containing protein, expressed
UniProt C5XL36
Pfam PF00170
Panther DB PTHR13301 PTHR13301:SF50
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G58120 : Basic-leucine zipper (bZIP) transcription factor family protein
RAP-DB (Rice) LOC_Os01g11350.1 : bZIP transcription factor domain containing protein, expressed
MaizeGDB (Corn) Zm00025a040027 , Zm00025a019978 , Zm00025a034154 , Zm00025a022934 , Zm00025a034463
Brachypodium KQK03275 , KQK03274
Barley HORVU3Hr1G040920.7 , HORVU3Hr1G040920.4 , HORVU3Hr1G040920.5 , HORVU3Hr1G040920.2 , HORVU3Hr1G040920.3 , HORVU3Hr1G040920.1 , HORVU3Hr1G040920.8 , HORVU3Hr1G040920.6 , HORVU3Hr1G040920.9
Wheat TraesCS3D02G148200 , TraesCS2B02G165700 , TraesCS2A02G140900 , TraesCS3A02G131900 , TraesCS3A02G131900 , TraesCS3B02G167500 , TraesCS2D02G144300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G301200 expressed protein -
2 Sobic.006G278400 ZOS4-14 - C2H2 zinc finger protein, expressed -
3 Sobic.008G163600 expressed protein -
4 Sobic.003G235800 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
5 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
6 Sobic.010G014200 expressed protein -
7 Sobic.001G180300 expressed protein -
8 Sobic.010G136500 expressed protein -
9 Sobic.007G153400 ANTH domain containing protein, expressed -
10 Sobic.010G246500 glycosyl hydrolases family 16, putative, expressed -
11 Sobic.002G396900 csAtPR5, putative, expressed -
12 Sobic.009G200100 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.009G031700 expressed protein -
14 Sobic.010G242200 expressed protein -
15 Sobic.003G402400 zinc finger, C3HC4 type family protein, expressed -
16 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
17 Sobic.006G163600 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.004G155900 heavy metal-associated domain containing protein, expressed -
19 Sobic.002G416000 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.004G115600 HMG1/2, putative, expressed K09273: upstream-binding transcription factor


Gene co-expression network
sample Sobic003G021800 Sobic003G021800 Sobic003G301200 Sobic003G301200 Sobic003G021800--Sobic003G301200 Sobic006G278400 Sobic006G278400 Sobic003G021800--Sobic006G278400 Sobic008G163600 Sobic008G163600 Sobic003G021800--Sobic008G163600 Sobic003G235800 Sobic003G235800 Sobic003G021800--Sobic003G235800 Sobic007G081300 Sobic007G081300 Sobic003G021800--Sobic007G081300 Sobic010G014200 Sobic010G014200 Sobic003G021800--Sobic010G014200 Sobic001G180300 Sobic001G180300 Sobic003G021800--Sobic001G180300 Sobic010G136500 Sobic010G136500 Sobic003G021800--Sobic010G136500 Sobic007G153400 Sobic007G153400 Sobic003G021800--Sobic007G153400 Sobic003G301200--Sobic007G081300 Sobic003G301200--Sobic006G278400 Sobic003G301200--Sobic003G235800 Sobic003G301200--Sobic001G180300 Sobic004G227000 Sobic004G227000 Sobic003G301200--Sobic004G227000 Sobic010G189800 Sobic010G189800 Sobic003G301200--Sobic010G189800 Sobic003G301200--Sobic008G163600 Sobic006G005000 Sobic006G005000 Sobic003G301200--Sobic006G005000 Sobic006G187600 Sobic006G187600 Sobic003G301200--Sobic006G187600 Sobic006G278400--Sobic004G227000 Sobic006G278400--Sobic001G180300 Sobic006G278400--Sobic003G301200 Sobic006G278400--Sobic008G163600 Sobic006G278400--Sobic007G081300 Sobic006G278400--Sobic006G187600 Sobic006G278400--Sobic010G014200 Sobic002G425900 Sobic002G425900 Sobic006G278400--Sobic002G425900 Sobic004G128600 Sobic004G128600 Sobic006G278400--Sobic004G128600 Sobic008G163600--Sobic002G425900 Sobic010G224800 Sobic010G224800 Sobic008G163600--Sobic010G224800 Sobic008G163600--Sobic006G278400 Sobic010G114400 Sobic010G114400 Sobic008G163600--Sobic010G114400 Sobic002G284800 Sobic002G284800 Sobic008G163600--Sobic002G284800 Sobic001G255700 Sobic001G255700 Sobic008G163600--Sobic001G255700 Sobic010G179150 Sobic010G179150 Sobic008G163600--Sobic010G179150 Sobic007G001300 Sobic007G001300 Sobic008G163600--Sobic007G001300 Sobic004G197300 Sobic004G197300 Sobic008G163600--Sobic004G197300 Sobic003G235800--Sobic003G301200 Sobic006G259201 Sobic006G259201 Sobic003G235800--Sobic006G259201 Sobic006G227800 Sobic006G227800 Sobic003G235800--Sobic006G227800 Sobic003G235800--Sobic006G005000 Sobic003G235800--Sobic007G081300 Sobic002G416000 Sobic002G416000 Sobic003G235800--Sobic002G416000 Sobic004G155900 Sobic004G155900 Sobic003G235800--Sobic004G155900 Sobic007G221800 Sobic007G221800 Sobic003G235800--Sobic007G221800 Sobic004G055800 Sobic004G055800 Sobic003G235800--Sobic004G055800 Sobic007G081300--Sobic003G301200 Sobic007G081300--Sobic006G278400 Sobic007G081300--Sobic010G189800 Sobic007G081300--Sobic001G180300 Sobic003G092200 Sobic003G092200 Sobic007G081300--Sobic003G092200 Sobic007G081300--Sobic004G227000 Sobic007G149600 Sobic007G149600 Sobic007G081300--Sobic007G149600 Sobic007G081300--Sobic006G187600 Sobic007G081300--Sobic006G005000 Sobic010G014200--Sobic001G180300 Sobic004G329100 Sobic004G329100 Sobic010G014200--Sobic004G329100 Sobic010G014200--Sobic004G128600 Sobic010G178900 Sobic010G178900 Sobic010G014200--Sobic010G178900 Sobic010G014200--Sobic006G278400 Sobic010G014200--Sobic008G163600 Sobic005G226900 Sobic005G226900 Sobic010G014200--Sobic005G226900 Sobic010G014200--Sobic004G227000 Sobic001G541900 Sobic001G541900 Sobic010G014200--Sobic001G541900 Sobic001G180300--Sobic006G187600 Sobic001G180300--Sobic004G227000 Sobic001G180300--Sobic006G278400 Sobic001G180300--Sobic010G014200 Sobic001G180300--Sobic003G092200 Sobic001G180300--Sobic002G425900 Sobic001G180300--Sobic008G163600 Sobic001G180300--Sobic004G329100 Sobic001G180300--Sobic010G178900 Sobic008G137500 Sobic008G137500 Sobic010G136500--Sobic008G137500 Sobic006G228100 Sobic006G228100 Sobic010G136500--Sobic006G228100 Sobic010G246500 Sobic010G246500 Sobic010G136500--Sobic010G246500 Sobic010G136500--Sobic003G301200 Sobic004G225400 Sobic004G225400 Sobic010G136500--Sobic004G225400 Sobic006G163600 Sobic006G163600 Sobic010G136500--Sobic006G163600 Sobic009G070000 Sobic009G070000 Sobic010G136500--Sobic009G070000 Sobic010G191100 Sobic010G191100 Sobic010G136500--Sobic010G191100 Sobic010G136500--Sobic004G155900 Sobic001G530300 Sobic001G530300 Sobic007G153400--Sobic001G530300 Sobic007G153400--Sobic006G228100 Sobic007G017900 Sobic007G017900 Sobic007G153400--Sobic007G017900 Sobic007G153400--Sobic003G021800 Sobic002G237700 Sobic002G237700 Sobic007G153400--Sobic002G237700 Sobic009G233600 Sobic009G233600 Sobic007G153400--Sobic009G233600 Sobic001G511200 Sobic001G511200 Sobic007G153400--Sobic001G511200 Sobic006G069500 Sobic006G069500 Sobic007G153400--Sobic006G069500 Sobic007G153400--Sobic004G225400
Octagon: transcription factors


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