Gene annotation
Transcriptome id Sobic.002G396900.1
Synonym
Functional annotation csAtPR5, putative, expressed
UniProt A0A1B6QFX9
Pfam -
Panther DB PTHR33065 PTHR33065:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g04590.1 : csAtPR5, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
2 Sobic.001G523300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
3 Sobic.006G037000 - -
4 Sobic.010G200800 protein kinase domain containing protein, expressed -
5 Sobic.003G406240 - -
6 Sobic.002G231800 purine permease, putative, expressed -
7 Sobic.008G096150 - -
8 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
9 Sobic.007G174100 carrier, putative, expressed -
10 Sobic.004G032500 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
12 Sobic.009G152901 - -
13 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
14 Sobic.001G186925 - -
15 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
16 Sobic.003G065001 - -
17 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
18 Sobic.002G004100 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
19 Sobic.001G120100 DUF1295 domain containing protein, putative, expressed -
20 Sobic.004G354800 - -


Gene co-expression network
sample Sobic002G396900 Sobic002G396900 Sobic009G031300 Sobic009G031300 Sobic002G396900--Sobic009G031300 Sobic001G523300 Sobic001G523300 Sobic002G396900--Sobic001G523300 Sobic006G037000 Sobic006G037000 Sobic002G396900--Sobic006G037000 Sobic010G200800 Sobic010G200800 Sobic002G396900--Sobic010G200800 Sobic003G406240 Sobic003G406240 Sobic002G396900--Sobic003G406240 Sobic002G231800 Sobic002G231800 Sobic002G396900--Sobic002G231800 Sobic008G096150 Sobic008G096150 Sobic002G396900--Sobic008G096150 Sobic003G149900 Sobic003G149900 Sobic002G396900--Sobic003G149900 Sobic007G174100 Sobic007G174100 Sobic002G396900--Sobic007G174100 Sobic009G031300--Sobic006G037000 Sobic009G031300--Sobic002G396900 Sobic009G031300--Sobic010G200800 Sobic009G031300--Sobic003G149900 Sobic009G031300--Sobic007G174100 Sobic008G096900 Sobic008G096900 Sobic009G031300--Sobic008G096900 Sobic005G076100 Sobic005G076100 Sobic009G031300--Sobic005G076100 Sobic009G031300--Sobic001G523300 Sobic001G115900 Sobic001G115900 Sobic009G031300--Sobic001G115900 Sobic001G523300--Sobic003G406240 Sobic001G523300--Sobic002G396900 Sobic001G523300--Sobic008G096150 Sobic001G523300--Sobic009G031300 Sobic001G523300--Sobic006G037000 Sobic001G523300--Sobic010G200800 Sobic009G072400 Sobic009G072400 Sobic001G523300--Sobic009G072400 Sobic002G326200 Sobic002G326200 Sobic001G523300--Sobic002G326200 Sobic001G523300--Sobic007G174100 Sobic006G037000--Sobic009G031300 Sobic006G037000--Sobic003G149900 Sobic006G037000--Sobic001G115900 Sobic006G037000--Sobic008G096900 Sobic009G238200 Sobic009G238200 Sobic006G037000--Sobic009G238200 Sobic006G037000--Sobic007G174100 Sobic009G258150 Sobic009G258150 Sobic006G037000--Sobic009G258150 Sobic006G037000--Sobic010G200800 Sobic006G069050 Sobic006G069050 Sobic006G037000--Sobic006G069050 Sobic010G200800--Sobic009G031300 Sobic010G200800--Sobic002G326200 Sobic009G152901 Sobic009G152901 Sobic010G200800--Sobic009G152901 Sobic010G200800--Sobic003G149900 Sobic003G008850 Sobic003G008850 Sobic010G200800--Sobic003G008850 Sobic010G200800--Sobic006G037000 Sobic004G016600 Sobic004G016600 Sobic010G200800--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic010G200800--Sobic003G038300 Sobic010G200800--Sobic007G174100 Sobic003G406240--Sobic001G523300 Sobic003G406240--Sobic002G396900 Sobic003G406240--Sobic009G031300 Sobic003G406240--Sobic006G037000 Sobic003G406240--Sobic008G096150 Sobic002G359200 Sobic002G359200 Sobic003G406240--Sobic002G359200 Sobic003G406240--Sobic009G072400 Sobic003G406240--Sobic010G200800 Sobic004G205400 Sobic004G205400 Sobic003G406240--Sobic004G205400 Sobic003G109400 Sobic003G109400 Sobic002G231800--Sobic003G109400 Sobic004G354800 Sobic004G354800 Sobic002G231800--Sobic004G354800 Sobic001G537900 Sobic001G537900 Sobic002G231800--Sobic001G537900 Sobic008G020300 Sobic008G020300 Sobic002G231800--Sobic008G020300 Sobic007G001300 Sobic007G001300 Sobic002G231800--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic002G231800--Sobic002G156300 Sobic006G019901 Sobic006G019901 Sobic002G231800--Sobic006G019901 Sobic010G114400 Sobic010G114400 Sobic002G231800--Sobic010G114400 Sobic009G127600 Sobic009G127600 Sobic002G231800--Sobic009G127600 Sobic008G096150--Sobic007G174100 Sobic010G150600 Sobic010G150600 Sobic008G096150--Sobic010G150600 Sobic008G096150--Sobic001G523300 Sobic008G096150--Sobic002G326200 Sobic001G212701 Sobic001G212701 Sobic008G096150--Sobic001G212701 Sobic002G234900 Sobic002G234900 Sobic008G096150--Sobic002G234900 Sobic008G096150--Sobic009G031300 Sobic008G096150--Sobic010G200800 Sobic001G309000 Sobic001G309000 Sobic008G096150--Sobic001G309000 Sobic006G058300 Sobic006G058300 Sobic003G149900--Sobic006G058300 Sobic003G149900--Sobic009G152901 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic003G149900--Sobic004G016600 Sobic003G149900--Sobic004G354800 Sobic001G016900 Sobic001G016900 Sobic003G149900--Sobic001G016900 Sobic001G120100 Sobic001G120100 Sobic003G149900--Sobic001G120100 Sobic003G149900--Sobic003G038300 Sobic007G174100--Sobic005G076100 Sobic010G132300 Sobic010G132300 Sobic007G174100--Sobic010G132300 Sobic007G174100--Sobic003G149900 Sobic007G174100--Sobic002G326200 Sobic004G160950 Sobic004G160950 Sobic007G174100--Sobic004G160950 Sobic007G174100--Sobic008G096150 Sobic007G174100--Sobic006G058300 Sobic007G174100--Sobic008G096900 Sobic007G174100--Sobic003G008850
Octagon: transcription factors


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