Gene annotation
Transcriptome id Sobic.010G200800.1
Synonym HT1, Sb10g024900
Functional annotation protein kinase domain containing protein, expressed
UniProt C5Z6K7
Pfam PF14531
Panther DB PTHR23257 PTHR23257:SF475
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G62400 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os06g43030.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042086 , Zm00025a051442
Brachypodium KQK17562 , PNT75582
Barley HORVU0Hr1G015980.5 , HORVU0Hr1G015980.4 , HORVU0Hr1G015980.3 , HORVU0Hr1G015980.2 , HORVU7Hr1G092030.5 , HORVU7Hr1G092030.4 , HORVU7Hr1G092030.3 , HORVU7Hr1G092030.2 , HORVU7Hr1G092030.1
Wheat TraesCS7D02G384700 , TraesCS7B02G290700 , TraesCS7A02G388800 , TraesCS6A02G172600 , TraesCS6B02G200100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
2 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.009G152901 - -
4 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
5 Sobic.003G008850 - -
6 Sobic.006G037000 - -
7 Sobic.004G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.003G038300 - -
9 Sobic.007G174100 carrier, putative, expressed -
10 Sobic.005G076100 rp3 protein, putative, expressed -
11 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
12 Sobic.001G120100 DUF1295 domain containing protein, putative, expressed -
13 Sobic.006G058300 expressed protein -
14 Sobic.003G239700 proteins of unknown function domain containing protein, expressed -
15 Sobic.004G354800 - -
16 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
17 Sobic.002G396900 csAtPR5, putative, expressed -
18 Sobic.002G158600 - -
19 Sobic.008G096150 - -
20 Sobic.008G164525 - -


Gene co-expression network
sample Sobic010G200800 Sobic010G200800 Sobic009G031300 Sobic009G031300 Sobic010G200800--Sobic009G031300 Sobic002G326200 Sobic002G326200 Sobic010G200800--Sobic002G326200 Sobic009G152901 Sobic009G152901 Sobic010G200800--Sobic009G152901 Sobic003G149900 Sobic003G149900 Sobic010G200800--Sobic003G149900 Sobic003G008850 Sobic003G008850 Sobic010G200800--Sobic003G008850 Sobic006G037000 Sobic006G037000 Sobic010G200800--Sobic006G037000 Sobic004G016600 Sobic004G016600 Sobic010G200800--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic010G200800--Sobic003G038300 Sobic007G174100 Sobic007G174100 Sobic010G200800--Sobic007G174100 Sobic009G031300--Sobic006G037000 Sobic002G396900 Sobic002G396900 Sobic009G031300--Sobic002G396900 Sobic009G031300--Sobic010G200800 Sobic009G031300--Sobic003G149900 Sobic009G031300--Sobic007G174100 Sobic008G096900 Sobic008G096900 Sobic009G031300--Sobic008G096900 Sobic005G076100 Sobic005G076100 Sobic009G031300--Sobic005G076100 Sobic001G523300 Sobic001G523300 Sobic009G031300--Sobic001G523300 Sobic001G115900 Sobic001G115900 Sobic009G031300--Sobic001G115900 Sobic002G326200--Sobic007G174100 Sobic002G326200--Sobic010G200800 Sobic002G326200--Sobic005G076100 Sobic002G326200--Sobic003G149900 Sobic006G058300 Sobic006G058300 Sobic002G326200--Sobic006G058300 Sobic002G326200--Sobic003G008850 Sobic010G257300 Sobic010G257300 Sobic002G326200--Sobic010G257300 Sobic002G326200--Sobic001G115900 Sobic009G258150 Sobic009G258150 Sobic002G326200--Sobic009G258150 Sobic004G239000 Sobic004G239000 Sobic009G152901--Sobic004G239000 Sobic001G016900 Sobic001G016900 Sobic009G152901--Sobic001G016900 Sobic003G367401 Sobic003G367401 Sobic009G152901--Sobic003G367401 Sobic001G120100 Sobic001G120100 Sobic009G152901--Sobic001G120100 Sobic009G152901--Sobic004G016600 Sobic003G368150 Sobic003G368150 Sobic009G152901--Sobic003G368150 Sobic004G197300 Sobic004G197300 Sobic009G152901--Sobic004G197300 Sobic001G537900 Sobic001G537900 Sobic009G152901--Sobic001G537900 Sobic010G201000 Sobic010G201000 Sobic009G152901--Sobic010G201000 Sobic003G149900--Sobic006G058300 Sobic003G149900--Sobic009G152901 Sobic003G149900--Sobic001G537900 Sobic008G020300 Sobic008G020300 Sobic003G149900--Sobic008G020300 Sobic003G149900--Sobic004G016600 Sobic004G354800 Sobic004G354800 Sobic003G149900--Sobic004G354800 Sobic003G149900--Sobic001G016900 Sobic003G149900--Sobic001G120100 Sobic003G149900--Sobic003G038300 Sobic003G008850--Sobic001G537900 Sobic003G008850--Sobic001G120100 Sobic006G256801 Sobic006G256801 Sobic003G008850--Sobic006G256801 Sobic003G008850--Sobic004G016600 Sobic003G008850--Sobic008G020300 Sobic008G164525 Sobic008G164525 Sobic003G008850--Sobic008G164525 Sobic007G204500 Sobic007G204500 Sobic003G008850--Sobic007G204500 Sobic008G119000 Sobic008G119000 Sobic003G008850--Sobic008G119000 Sobic004G251350 Sobic004G251350 Sobic003G008850--Sobic004G251350 Sobic006G037000--Sobic009G031300 Sobic006G037000--Sobic003G149900 Sobic006G037000--Sobic001G115900 Sobic006G037000--Sobic008G096900 Sobic009G238200 Sobic009G238200 Sobic006G037000--Sobic009G238200 Sobic006G037000--Sobic007G174100 Sobic006G037000--Sobic009G258150 Sobic006G037000--Sobic010G200800 Sobic006G069050 Sobic006G069050 Sobic006G037000--Sobic006G069050 Sobic004G016600--Sobic001G120100 Sobic004G016600--Sobic001G016900 Sobic009G085600 Sobic009G085600 Sobic004G016600--Sobic009G085600 Sobic004G016600--Sobic004G251350 Sobic004G016600--Sobic001G537900 Sobic007G013100 Sobic007G013100 Sobic004G016600--Sobic007G013100 Sobic003G167825 Sobic003G167825 Sobic004G016600--Sobic003G167825 Sobic007G111600 Sobic007G111600 Sobic004G016600--Sobic007G111600 Sobic004G016600--Sobic009G152901 Sobic003G126400 Sobic003G126400 Sobic003G038300--Sobic003G126400 Sobic003G038300--Sobic003G167825 Sobic003G038300--Sobic009G085600 Sobic003G038300--Sobic006G069050 Sobic003G038300--Sobic001G115900 Sobic003G038300--Sobic004G016600 Sobic003G038300--Sobic010G201000 Sobic003G038300--Sobic001G016900 Sobic004G152501 Sobic004G152501 Sobic003G038300--Sobic004G152501 Sobic007G174100--Sobic005G076100 Sobic010G132300 Sobic010G132300 Sobic007G174100--Sobic010G132300 Sobic007G174100--Sobic003G149900 Sobic007G174100--Sobic002G326200 Sobic004G160950 Sobic004G160950 Sobic007G174100--Sobic004G160950 Sobic008G096150 Sobic008G096150 Sobic007G174100--Sobic008G096150 Sobic007G174100--Sobic006G058300 Sobic007G174100--Sobic008G096900 Sobic007G174100--Sobic003G008850
Octagon: transcription factors


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