Gene annotation
Transcriptome id Sobic.001G186925.1
Synonym -
Functional annotation -
UniProt A0A1Z5S6W1
Pfam PF07762
Panther DB PTHR33074 PTHR33074:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g29090.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
2 Sobic.002G396900 csAtPR5, putative, expressed -
3 Sobic.004G354800 - -
4 Sobic.002G231800 purine permease, putative, expressed -
5 Sobic.010G200800 protein kinase domain containing protein, expressed -
6 Sobic.001G120100 DUF1295 domain containing protein, putative, expressed -
7 Sobic.005G076100 rp3 protein, putative, expressed -
8 Sobic.003G149900 PPR repeat domain containing protein, putative, expressed -
9 Sobic.001G537900 AGAP010609-PA, putative, expressed K17867: DPH4, diphthamide biosynthesis protein 4
10 Sobic.006G037000 - -
11 Sobic.003G008850 - -
12 Sobic.009G152901 - -
13 Sobic.004G016600 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.007G174100 carrier, putative, expressed -
15 Sobic.008G020300 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
16 Sobic.006G256801 - -
17 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
18 Sobic.001G016900 RNA-binding protein Luc7-like, putative, expressed -
19 Sobic.004G008000 matrix attachment region binding protein, putative, expressed K14565: nucleolar protein 58
20 Sobic.009G127600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -


Gene co-expression network
sample Sobic001G186925 Sobic001G186925 Sobic009G031300 Sobic009G031300 Sobic001G186925--Sobic009G031300 Sobic002G396900 Sobic002G396900 Sobic001G186925--Sobic002G396900 Sobic004G354800 Sobic004G354800 Sobic001G186925--Sobic004G354800 Sobic002G231800 Sobic002G231800 Sobic001G186925--Sobic002G231800 Sobic010G200800 Sobic010G200800 Sobic001G186925--Sobic010G200800 Sobic001G120100 Sobic001G120100 Sobic001G186925--Sobic001G120100 Sobic005G076100 Sobic005G076100 Sobic001G186925--Sobic005G076100 Sobic003G149900 Sobic003G149900 Sobic001G186925--Sobic003G149900 Sobic001G537900 Sobic001G537900 Sobic001G186925--Sobic001G537900 Sobic006G037000 Sobic006G037000 Sobic009G031300--Sobic006G037000 Sobic009G031300--Sobic002G396900 Sobic009G031300--Sobic010G200800 Sobic009G031300--Sobic003G149900 Sobic007G174100 Sobic007G174100 Sobic009G031300--Sobic007G174100 Sobic008G096900 Sobic008G096900 Sobic009G031300--Sobic008G096900 Sobic009G031300--Sobic005G076100 Sobic001G523300 Sobic001G523300 Sobic009G031300--Sobic001G523300 Sobic001G115900 Sobic001G115900 Sobic009G031300--Sobic001G115900 Sobic002G396900--Sobic009G031300 Sobic002G396900--Sobic001G523300 Sobic002G396900--Sobic006G037000 Sobic002G396900--Sobic010G200800 Sobic003G406240 Sobic003G406240 Sobic002G396900--Sobic003G406240 Sobic002G396900--Sobic002G231800 Sobic008G096150 Sobic008G096150 Sobic002G396900--Sobic008G096150 Sobic002G396900--Sobic003G149900 Sobic002G396900--Sobic007G174100 Sobic009G163500 Sobic009G163500 Sobic004G354800--Sobic009G163500 Sobic004G354800--Sobic001G537900 Sobic003G109400 Sobic003G109400 Sobic004G354800--Sobic003G109400 Sobic008G020300 Sobic008G020300 Sobic004G354800--Sobic008G020300 Sobic003G136700 Sobic003G136700 Sobic004G354800--Sobic003G136700 Sobic004G197300 Sobic004G197300 Sobic004G354800--Sobic004G197300 Sobic008G131800 Sobic008G131800 Sobic004G354800--Sobic008G131800 Sobic009G152901 Sobic009G152901 Sobic004G354800--Sobic009G152901 Sobic001G255700 Sobic001G255700 Sobic004G354800--Sobic001G255700 Sobic002G231800--Sobic003G109400 Sobic002G231800--Sobic004G354800 Sobic002G231800--Sobic001G537900 Sobic002G231800--Sobic008G020300 Sobic007G001300 Sobic007G001300 Sobic002G231800--Sobic007G001300 Sobic002G156300 Sobic002G156300 Sobic002G231800--Sobic002G156300 Sobic006G019901 Sobic006G019901 Sobic002G231800--Sobic006G019901 Sobic010G114400 Sobic010G114400 Sobic002G231800--Sobic010G114400 Sobic009G127600 Sobic009G127600 Sobic002G231800--Sobic009G127600 Sobic010G200800--Sobic009G031300 Sobic002G326200 Sobic002G326200 Sobic010G200800--Sobic002G326200 Sobic010G200800--Sobic009G152901 Sobic010G200800--Sobic003G149900 Sobic003G008850 Sobic003G008850 Sobic010G200800--Sobic003G008850 Sobic010G200800--Sobic006G037000 Sobic004G016600 Sobic004G016600 Sobic010G200800--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic010G200800--Sobic003G038300 Sobic010G200800--Sobic007G174100 Sobic001G120100--Sobic001G537900 Sobic001G120100--Sobic004G016600 Sobic007G111600 Sobic007G111600 Sobic001G120100--Sobic007G111600 Sobic004G251350 Sobic004G251350 Sobic001G120100--Sobic004G251350 Sobic001G016900 Sobic001G016900 Sobic001G120100--Sobic001G016900 Sobic001G120100--Sobic003G008850 Sobic010G179150 Sobic010G179150 Sobic001G120100--Sobic010G179150 Sobic001G120100--Sobic009G152901 Sobic007G204500 Sobic007G204500 Sobic001G120100--Sobic007G204500 Sobic009G082400 Sobic009G082400 Sobic005G076100--Sobic009G082400 Sobic005G076100--Sobic004G016600 Sobic005G076100--Sobic001G537900 Sobic005G076100--Sobic003G008850 Sobic005G076100--Sobic007G174100 Sobic005G076100--Sobic004G354800 Sobic002G165401 Sobic002G165401 Sobic005G076100--Sobic002G165401 Sobic005G076100--Sobic003G149900 Sobic006G058300 Sobic006G058300 Sobic005G076100--Sobic006G058300 Sobic003G149900--Sobic006G058300 Sobic003G149900--Sobic009G152901 Sobic003G149900--Sobic001G537900 Sobic003G149900--Sobic008G020300 Sobic003G149900--Sobic004G016600 Sobic003G149900--Sobic004G354800 Sobic003G149900--Sobic001G016900 Sobic003G149900--Sobic001G120100 Sobic003G149900--Sobic003G038300 Sobic001G537900--Sobic008G020300 Sobic001G537900--Sobic001G120100 Sobic001G537900--Sobic010G179150 Sobic001G537900--Sobic004G354800 Sobic001G537900--Sobic004G251350 Sobic001G537900--Sobic004G197300 Sobic001G537900--Sobic009G163500 Sobic001G537900--Sobic003G008850 Sobic001G537900--Sobic007G111600
Octagon: transcription factors


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