Gene annotation
Transcriptome id Sobic.003G406240.1
Synonym -
Functional annotation -
UniProt A0A1W0W1A2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G523300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@heavy metal-associated domain containing protein, expressed -
2 Sobic.002G396900 csAtPR5, putative, expressed -
3 Sobic.009G031300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide containing protein, putative, expressed -
4 Sobic.006G037000 - -
5 Sobic.008G096150 - -
6 Sobic.002G359200 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.009G072400 ABC transporter, ATP-binding protein, putative, expressed -
8 Sobic.010G200800 protein kinase domain containing protein, expressed -
9 Sobic.004G205400 - -
10 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
11 Sobic.009G258150 - -
12 Sobic.002G326200 TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
13 Sobic.010G060701 - K07964: heparanase
14 Sobic.004G011201 - K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
15 Sobic.007G174100 carrier, putative, expressed -
16 Sobic.009G238200 transcription factor(PubMedID : 30367619)@WRKY19, expressed -
17 Sobic.008G096900 protein of unknown function DUF502 domain containing protein, expressed -
18 Sobic.001G068901 - -
19 Sobic.001G537600 expressed protein -
20 Sobic.001G115900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G406240 Sobic003G406240 Sobic001G523300 Sobic001G523300 Sobic003G406240--Sobic001G523300 Sobic002G396900 Sobic002G396900 Sobic003G406240--Sobic002G396900 Sobic009G031300 Sobic009G031300 Sobic003G406240--Sobic009G031300 Sobic006G037000 Sobic006G037000 Sobic003G406240--Sobic006G037000 Sobic008G096150 Sobic008G096150 Sobic003G406240--Sobic008G096150 Sobic002G359200 Sobic002G359200 Sobic003G406240--Sobic002G359200 Sobic009G072400 Sobic009G072400 Sobic003G406240--Sobic009G072400 Sobic010G200800 Sobic010G200800 Sobic003G406240--Sobic010G200800 Sobic004G205400 Sobic004G205400 Sobic003G406240--Sobic004G205400 Sobic001G523300--Sobic003G406240 Sobic001G523300--Sobic002G396900 Sobic001G523300--Sobic008G096150 Sobic001G523300--Sobic009G031300 Sobic001G523300--Sobic006G037000 Sobic001G523300--Sobic010G200800 Sobic001G523300--Sobic009G072400 Sobic002G326200 Sobic002G326200 Sobic001G523300--Sobic002G326200 Sobic007G174100 Sobic007G174100 Sobic001G523300--Sobic007G174100 Sobic002G396900--Sobic009G031300 Sobic002G396900--Sobic001G523300 Sobic002G396900--Sobic006G037000 Sobic002G396900--Sobic010G200800 Sobic002G396900--Sobic003G406240 Sobic002G231800 Sobic002G231800 Sobic002G396900--Sobic002G231800 Sobic002G396900--Sobic008G096150 Sobic003G149900 Sobic003G149900 Sobic002G396900--Sobic003G149900 Sobic002G396900--Sobic007G174100 Sobic009G031300--Sobic006G037000 Sobic009G031300--Sobic002G396900 Sobic009G031300--Sobic010G200800 Sobic009G031300--Sobic003G149900 Sobic009G031300--Sobic007G174100 Sobic008G096900 Sobic008G096900 Sobic009G031300--Sobic008G096900 Sobic005G076100 Sobic005G076100 Sobic009G031300--Sobic005G076100 Sobic009G031300--Sobic001G523300 Sobic001G115900 Sobic001G115900 Sobic009G031300--Sobic001G115900 Sobic006G037000--Sobic009G031300 Sobic006G037000--Sobic003G149900 Sobic006G037000--Sobic001G115900 Sobic006G037000--Sobic008G096900 Sobic009G238200 Sobic009G238200 Sobic006G037000--Sobic009G238200 Sobic006G037000--Sobic007G174100 Sobic009G258150 Sobic009G258150 Sobic006G037000--Sobic009G258150 Sobic006G037000--Sobic010G200800 Sobic006G069050 Sobic006G069050 Sobic006G037000--Sobic006G069050 Sobic008G096150--Sobic007G174100 Sobic010G150600 Sobic010G150600 Sobic008G096150--Sobic010G150600 Sobic008G096150--Sobic001G523300 Sobic008G096150--Sobic002G326200 Sobic001G212701 Sobic001G212701 Sobic008G096150--Sobic001G212701 Sobic002G234900 Sobic002G234900 Sobic008G096150--Sobic002G234900 Sobic008G096150--Sobic009G031300 Sobic008G096150--Sobic010G200800 Sobic001G309000 Sobic001G309000 Sobic008G096150--Sobic001G309000 Sobic002G359200--Sobic003G406240 Sobic002G359200--Sobic001G523300 Sobic002G359200--Sobic004G205400 Sobic004G011201 Sobic004G011201 Sobic002G359200--Sobic004G011201 Sobic002G359200--Sobic002G396900 Sobic005G002500 Sobic005G002500 Sobic002G359200--Sobic005G002500 Sobic001G308450 Sobic001G308450 Sobic002G359200--Sobic001G308450 Sobic001G537600 Sobic001G537600 Sobic002G359200--Sobic001G537600 Sobic002G359200--Sobic006G037000 Sobic001G068901 Sobic001G068901 Sobic009G072400--Sobic001G068901 Sobic010G257300 Sobic010G257300 Sobic009G072400--Sobic010G257300 Sobic006G093400 Sobic006G093400 Sobic009G072400--Sobic006G093400 Sobic004G012100 Sobic004G012100 Sobic009G072400--Sobic004G012100 Sobic009G072400--Sobic001G537600 Sobic010G242100 Sobic010G242100 Sobic009G072400--Sobic010G242100 Sobic009G072400--Sobic008G096900 Sobic010G253700 Sobic010G253700 Sobic009G072400--Sobic010G253700 Sobic001G435800 Sobic001G435800 Sobic009G072400--Sobic001G435800 Sobic010G200800--Sobic009G031300 Sobic010G200800--Sobic002G326200 Sobic009G152901 Sobic009G152901 Sobic010G200800--Sobic009G152901 Sobic010G200800--Sobic003G149900 Sobic003G008850 Sobic003G008850 Sobic010G200800--Sobic003G008850 Sobic010G200800--Sobic006G037000 Sobic004G016600 Sobic004G016600 Sobic010G200800--Sobic004G016600 Sobic003G038300 Sobic003G038300 Sobic010G200800--Sobic003G038300 Sobic010G200800--Sobic007G174100 Sobic006G260101 Sobic006G260101 Sobic004G205400--Sobic006G260101 Sobic005G116601 Sobic005G116601 Sobic004G205400--Sobic005G116601 Sobic001G087500 Sobic001G087500 Sobic004G205400--Sobic001G087500 Sobic004G162600 Sobic004G162600 Sobic004G205400--Sobic004G162600 Sobic010G060701 Sobic010G060701 Sobic004G205400--Sobic010G060701 Sobic004G205400--Sobic002G359200 Sobic010G278400 Sobic010G278400 Sobic004G205400--Sobic010G278400 Sobic004G205400--Sobic003G406240 Sobic004G205400--Sobic001G523300
Octagon: transcription factors


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