Gene annotation
Transcriptome id Sobic.010G256500.1
Synonym Sb10g029370
Functional annotation OsFBDUF35 - F-box and DUF domain containing protein, expressed
UniProt C5Z9B1
Pfam PF00646 PF03478
Panther DB PTHR11102 PTHR11102:SF88
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G22660 : F-box family protein with a domain of unknown function (DUF295)
RAP-DB (Rice) LOC_Os06g49340.1 : OsFBDUF35 - F-box and DUF domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041762
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G016600 DUF567 domain containing protein, putative, expressed -
2 Sobic.003G085800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.001G251300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
4 Sobic.004G342900 RALFL22 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
5 Sobic.004G300701 - -
6 Sobic.009G244000 AMP-dependent synthetase("PubMedID : 26759170,PubMedID : 24597475")@AMP-binding enzyme, putative, expressed -
7 Sobic.003G337100 expressed protein -
8 Sobic.006G149400 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
9 Sobic.005G139075 - -
10 Sobic.004G293200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@zinc finger protein, putative, expressed -
11 Sobic.001G388900 biotin--protein ligase, putative, expressed K03801: lipoyl(octanoyl) transferase
12 Sobic.007G223900 cytokinin-O-glucosyltransferase 1, putative, expressed -
13 Sobic.005G041200 OsFBX396 - F-box domain containing protein, expressed -
14 Sobic.003G341200 expressed protein -
15 Sobic.002G326000 aspartic proteinase nepenthesin-1 precursor, putative, expressed -
16 Sobic.003G362700 cytochrome P450, putative, expressed -
17 Sobic.002G253000 no apical meristem protein, putative, expressed -
18 Sobic.001G425300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.006G075801 - -
20 Sobic.002G318501 - -


Gene co-expression network
sample Sobic010G256500 Sobic010G256500 Sobic005G016600 Sobic005G016600 Sobic010G256500--Sobic005G016600 Sobic003G085800 Sobic003G085800 Sobic010G256500--Sobic003G085800 Sobic001G251300 Sobic001G251300 Sobic010G256500--Sobic001G251300 Sobic004G342900 Sobic004G342900 Sobic010G256500--Sobic004G342900 Sobic004G300701 Sobic004G300701 Sobic010G256500--Sobic004G300701 Sobic009G244000 Sobic009G244000 Sobic010G256500--Sobic009G244000 Sobic003G337100 Sobic003G337100 Sobic010G256500--Sobic003G337100 Sobic006G149400 Sobic006G149400 Sobic010G256500--Sobic006G149400 Sobic005G139075 Sobic005G139075 Sobic010G256500--Sobic005G139075 Sobic002G420200 Sobic002G420200 Sobic005G016600--Sobic002G420200 Sobic002G253000 Sobic002G253000 Sobic005G016600--Sobic002G253000 Sobic005G016600--Sobic010G256500 Sobic005G016600--Sobic004G342900 Sobic003G283500 Sobic003G283500 Sobic005G016600--Sobic003G283500 Sobic005G016600--Sobic004G300701 Sobic005G016600--Sobic005G139075 Sobic002G350700 Sobic002G350700 Sobic005G016600--Sobic002G350700 Sobic002G318501 Sobic002G318501 Sobic005G016600--Sobic002G318501 Sobic003G085800--Sobic010G256500 Sobic009G198600 Sobic009G198600 Sobic003G085800--Sobic009G198600 Sobic005G155600 Sobic005G155600 Sobic003G085800--Sobic005G155600 Sobic003G102200 Sobic003G102200 Sobic003G085800--Sobic003G102200 Sobic003G085800--Sobic005G139075 Sobic007G223900 Sobic007G223900 Sobic003G085800--Sobic007G223900 Sobic002G333400 Sobic002G333400 Sobic003G085800--Sobic002G333400 Sobic003G085800--Sobic005G016600 Sobic002G373001 Sobic002G373001 Sobic003G085800--Sobic002G373001 Sobic001G388900 Sobic001G388900 Sobic001G251300--Sobic001G388900 Sobic009G064100 Sobic009G064100 Sobic001G251300--Sobic009G064100 Sobic010G158200 Sobic010G158200 Sobic001G251300--Sobic010G158200 Sobic001G251300--Sobic010G256500 Sobic001G251300--Sobic005G016600 Sobic002G326000 Sobic002G326000 Sobic001G251300--Sobic002G326000 Sobic001G251300--Sobic002G253000 Sobic002G314700 Sobic002G314700 Sobic001G251300--Sobic002G314700 Sobic001G251300--Sobic005G139075 Sobic004G342900--Sobic003G337100 Sobic004G342900--Sobic002G326000 Sobic004G342900--Sobic010G158200 Sobic004G342900--Sobic002G253000 Sobic006G075801 Sobic006G075801 Sobic004G342900--Sobic006G075801 Sobic004G342900--Sobic005G016600 Sobic004G342900--Sobic004G300701 Sobic004G342900--Sobic003G283500 Sobic009G167300 Sobic009G167300 Sobic004G342900--Sobic009G167300 Sobic004G300701--Sobic003G283500 Sobic007G224800 Sobic007G224800 Sobic004G300701--Sobic007G224800 Sobic001G430000 Sobic001G430000 Sobic004G300701--Sobic001G430000 Sobic010G099400 Sobic010G099400 Sobic004G300701--Sobic010G099400 Sobic004G300701--Sobic004G342900 Sobic004G300701--Sobic003G337100 Sobic010G013100 Sobic010G013100 Sobic004G300701--Sobic010G013100 Sobic004G300701--Sobic005G016600 Sobic003G201300 Sobic003G201300 Sobic004G300701--Sobic003G201300 Sobic006G242600 Sobic006G242600 Sobic009G244000--Sobic006G242600 Sobic006G214101 Sobic006G214101 Sobic009G244000--Sobic006G214101 Sobic010G149900 Sobic010G149900 Sobic009G244000--Sobic010G149900 Sobic003G396400 Sobic003G396400 Sobic009G244000--Sobic003G396400 Sobic006G239100 Sobic006G239100 Sobic009G244000--Sobic006G239100 Sobic005G106800 Sobic005G106800 Sobic009G244000--Sobic005G106800 Sobic003G292800 Sobic003G292800 Sobic009G244000--Sobic003G292800 Sobic009G221701 Sobic009G221701 Sobic009G244000--Sobic009G221701 Sobic007G056400 Sobic007G056400 Sobic009G244000--Sobic007G056400 Sobic003G337100--Sobic009G167300 Sobic003G337100--Sobic004G342900 Sobic003G337100--Sobic002G326000 Sobic003G337100--Sobic010G158200 Sobic010G045200 Sobic010G045200 Sobic003G337100--Sobic010G045200 Sobic003G337100--Sobic006G075801 Sobic003G337100--Sobic003G201300 Sobic003G337100--Sobic006G239100 Sobic010G231400 Sobic010G231400 Sobic003G337100--Sobic010G231400 Sobic006G249300 Sobic006G249300 Sobic006G149400--Sobic006G249300 Sobic006G046900 Sobic006G046900 Sobic006G149400--Sobic006G046900 Sobic001G169500 Sobic001G169500 Sobic006G149400--Sobic001G169500 Sobic003G394400 Sobic003G394400 Sobic006G149400--Sobic003G394400 Sobic006G230600 Sobic006G230600 Sobic006G149400--Sobic006G230600 Sobic004G166200 Sobic004G166200 Sobic006G149400--Sobic004G166200 Sobic010G198600 Sobic010G198600 Sobic006G149400--Sobic010G198600 Sobic009G065500 Sobic009G065500 Sobic006G149400--Sobic009G065500 Sobic002G068600 Sobic002G068600 Sobic006G149400--Sobic002G068600 Sobic005G139075--Sobic002G314700 Sobic005G139075--Sobic009G198600 Sobic001G112200 Sobic001G112200 Sobic005G139075--Sobic001G112200 Sobic009G184000 Sobic009G184000 Sobic005G139075--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic005G139075--Sobic009G145700 Sobic003G362700 Sobic003G362700 Sobic005G139075--Sobic003G362700 Sobic001G502400 Sobic001G502400 Sobic005G139075--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic005G139075--Sobic006G235100 Sobic008G139600 Sobic008G139600 Sobic005G139075--Sobic008G139600
Octagon: transcription factors


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