Gene annotation
Transcriptome id Sobic.003G085800.2
Synonym Sb03g007220
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0VW85
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g03980.1 : expressed protein
MaizeGDB (Corn) Zm00025a023620
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G256500 OsFBDUF35 - F-box and DUF domain containing protein, expressed -
2 Sobic.009G198600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.005G155600 LYK, putative, expressed -
4 Sobic.003G102200 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.005G139075 - -
6 Sobic.007G223900 cytokinin-O-glucosyltransferase 1, putative, expressed -
7 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
8 Sobic.005G016600 DUF567 domain containing protein, putative, expressed -
9 Sobic.002G373001 - -
10 Sobic.002G042100 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.001G449700 highly upregulated during chilling in a chilling tolerant sorghum NSG(PubMedID : 29293808)@cytochrome P450, putative, expressed K01723: hydroperoxide dehydratase
12 Sobic.004G166200 expressed protein -
13 Sobic.001G077600 expressed protein -
14 Sobic.002G314700 receptor-like protein kinase, putative, expressed -
15 Sobic.009G141500 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659925)@ethylene-responsive transcription factor ERF020, putative, expressed -
16 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.006G100200 zinc finger, C3HC4 type domain containing protein, expressed -
18 Sobic.003G078100 B3 DNA binding domain containing protein, expressed -
19 Sobic.001G251300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
20 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -


Gene co-expression network
sample Sobic003G085800 Sobic003G085800 Sobic010G256500 Sobic010G256500 Sobic003G085800--Sobic010G256500 Sobic009G198600 Sobic009G198600 Sobic003G085800--Sobic009G198600 Sobic005G155600 Sobic005G155600 Sobic003G085800--Sobic005G155600 Sobic003G102200 Sobic003G102200 Sobic003G085800--Sobic003G102200 Sobic005G139075 Sobic005G139075 Sobic003G085800--Sobic005G139075 Sobic007G223900 Sobic007G223900 Sobic003G085800--Sobic007G223900 Sobic002G333400 Sobic002G333400 Sobic003G085800--Sobic002G333400 Sobic005G016600 Sobic005G016600 Sobic003G085800--Sobic005G016600 Sobic002G373001 Sobic002G373001 Sobic003G085800--Sobic002G373001 Sobic010G256500--Sobic005G016600 Sobic010G256500--Sobic003G085800 Sobic001G251300 Sobic001G251300 Sobic010G256500--Sobic001G251300 Sobic004G342900 Sobic004G342900 Sobic010G256500--Sobic004G342900 Sobic004G300701 Sobic004G300701 Sobic010G256500--Sobic004G300701 Sobic009G244000 Sobic009G244000 Sobic010G256500--Sobic009G244000 Sobic003G337100 Sobic003G337100 Sobic010G256500--Sobic003G337100 Sobic006G149400 Sobic006G149400 Sobic010G256500--Sobic006G149400 Sobic010G256500--Sobic005G139075 Sobic001G259900 Sobic001G259900 Sobic009G198600--Sobic001G259900 Sobic003G442100 Sobic003G442100 Sobic009G198600--Sobic003G442100 Sobic001G310600 Sobic001G310600 Sobic009G198600--Sobic001G310600 Sobic008G044300 Sobic008G044300 Sobic009G198600--Sobic008G044300 Sobic005G186100 Sobic005G186100 Sobic009G198600--Sobic005G186100 Sobic009G184000 Sobic009G184000 Sobic009G198600--Sobic009G184000 Sobic001G502400 Sobic001G502400 Sobic009G198600--Sobic001G502400 Sobic006G235100 Sobic006G235100 Sobic009G198600--Sobic006G235100 Sobic009G198600--Sobic005G139075 Sobic001G345400 Sobic001G345400 Sobic005G155600--Sobic001G345400 Sobic009G232266 Sobic009G232266 Sobic005G155600--Sobic009G232266 Sobic003G277500 Sobic003G277500 Sobic005G155600--Sobic003G277500 Sobic004G110400 Sobic004G110400 Sobic005G155600--Sobic004G110400 Sobic004G195000 Sobic004G195000 Sobic005G155600--Sobic004G195000 Sobic003G296300 Sobic003G296300 Sobic005G155600--Sobic003G296300 Sobic006G246100 Sobic006G246100 Sobic005G155600--Sobic006G246100 Sobic001G357500 Sobic001G357500 Sobic005G155600--Sobic001G357500 Sobic004G010300 Sobic004G010300 Sobic005G155600--Sobic004G010300 Sobic001G449700 Sobic001G449700 Sobic003G102200--Sobic001G449700 Sobic003G110200 Sobic003G110200 Sobic003G102200--Sobic003G110200 Sobic001G195100 Sobic001G195100 Sobic003G102200--Sobic001G195100 Sobic001G259700 Sobic001G259700 Sobic003G102200--Sobic001G259700 Sobic001G383700 Sobic001G383700 Sobic003G102200--Sobic001G383700 Sobic007G149300 Sobic007G149300 Sobic003G102200--Sobic007G149300 Sobic002G342400 Sobic002G342400 Sobic003G102200--Sobic002G342400 Sobic003G102200--Sobic002G373001 Sobic003G250600 Sobic003G250600 Sobic003G102200--Sobic003G250600 Sobic002G314700 Sobic002G314700 Sobic005G139075--Sobic002G314700 Sobic005G139075--Sobic009G198600 Sobic001G112200 Sobic001G112200 Sobic005G139075--Sobic001G112200 Sobic005G139075--Sobic009G184000 Sobic009G145700 Sobic009G145700 Sobic005G139075--Sobic009G145700 Sobic003G362700 Sobic003G362700 Sobic005G139075--Sobic003G362700 Sobic005G139075--Sobic001G502400 Sobic005G139075--Sobic006G235100 Sobic008G139600 Sobic008G139600 Sobic005G139075--Sobic008G139600 Sobic003G213600 Sobic003G213600 Sobic007G223900--Sobic003G213600 Sobic010G045200 Sobic010G045200 Sobic007G223900--Sobic010G045200 Sobic007G223900--Sobic003G337100 Sobic009G134450 Sobic009G134450 Sobic007G223900--Sobic009G134450 Sobic001G388900 Sobic001G388900 Sobic007G223900--Sobic001G388900 Sobic007G207300 Sobic007G207300 Sobic007G223900--Sobic007G207300 Sobic007G223900--Sobic009G244000 Sobic007G223900--Sobic003G085800 Sobic009G221701 Sobic009G221701 Sobic007G223900--Sobic009G221701 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic006G158600 Sobic006G158600 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic008G136400 Sobic008G136400 Sobic002G333400--Sobic008G136400 Sobic002G333400--Sobic005G186100 Sobic003G369100 Sobic003G369100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G140400 Sobic002G140400 Sobic002G333400--Sobic002G140400 Sobic007G074000 Sobic007G074000 Sobic002G333400--Sobic007G074000 Sobic002G420200 Sobic002G420200 Sobic005G016600--Sobic002G420200 Sobic002G253000 Sobic002G253000 Sobic005G016600--Sobic002G253000 Sobic005G016600--Sobic010G256500 Sobic005G016600--Sobic004G342900 Sobic003G283500 Sobic003G283500 Sobic005G016600--Sobic003G283500 Sobic005G016600--Sobic004G300701 Sobic005G016600--Sobic005G139075 Sobic002G350700 Sobic002G350700 Sobic005G016600--Sobic002G350700 Sobic002G318501 Sobic002G318501 Sobic005G016600--Sobic002G318501 Sobic002G373001--Sobic001G449700 Sobic002G034500 Sobic002G034500 Sobic002G373001--Sobic002G034500 Sobic003G021500 Sobic003G021500 Sobic002G373001--Sobic003G021500 Sobic002G319500 Sobic002G319500 Sobic002G373001--Sobic002G319500 Sobic002G373001--Sobic003G102200 Sobic002G070200 Sobic002G070200 Sobic002G373001--Sobic002G070200 Sobic002G082600 Sobic002G082600 Sobic002G373001--Sobic002G082600 Sobic002G373001--Sobic002G333400 Sobic004G095600 Sobic004G095600 Sobic002G373001--Sobic004G095600
Octagon: transcription factors


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