Gene annotation
Transcriptome id Sobic.002G042100.1
Synonym Sb02g003610
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt C5XA93
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF162
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06570 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os07g06860.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a045068 , Zm00025a045069 , Zm00025a045071
Brachypodium KQK20805 , KQK20796
Barley HORVU6Hr1G077260.1 , HORVU6Hr1G090630.4 , HORVU6Hr1G090630.2 , HORVU6Hr1G090630.3 , HORVU6Hr1G090630.1
Wheat TraesCS6B02G429700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
3 Sobic.001G481100 DUF581 domain containing protein, expressed -
4 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
6 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G251000 expressed protein -
8 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
10 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.001G100600 expressed protein -
12 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
13 Sobic.004G041900 apoptosis-inducing factor 2, putative, expressed -
14 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
15 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
16 Sobic.004G219800 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
19 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -


Gene co-expression network
sample Sobic002G042100 Sobic002G042100 Sobic001G231400 Sobic001G231400 Sobic002G042100--Sobic001G231400 Sobic002G192000 Sobic002G192000 Sobic002G042100--Sobic002G192000 Sobic001G481100 Sobic001G481100 Sobic002G042100--Sobic001G481100 Sobic004G243100 Sobic004G243100 Sobic002G042100--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G042100--Sobic001G018300 Sobic001G367600 Sobic001G367600 Sobic002G042100--Sobic001G367600 Sobic002G251000 Sobic002G251000 Sobic002G042100--Sobic002G251000 Sobic001G079300 Sobic001G079300 Sobic002G042100--Sobic001G079300 Sobic006G075400 Sobic006G075400 Sobic002G042100--Sobic006G075400 Sobic001G231400--Sobic001G018300 Sobic001G231400--Sobic004G243100 Sobic001G231400--Sobic002G192000 Sobic001G231400--Sobic002G251000 Sobic001G318700 Sobic001G318700 Sobic001G231400--Sobic001G318700 Sobic002G263400 Sobic002G263400 Sobic001G231400--Sobic002G263400 Sobic009G145500 Sobic009G145500 Sobic001G231400--Sobic009G145500 Sobic001G231400--Sobic001G367600 Sobic002G139400 Sobic002G139400 Sobic001G231400--Sobic002G139400 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic002G192000--Sobic001G231400 Sobic002G192000--Sobic004G243100 Sobic006G158600 Sobic006G158600 Sobic002G192000--Sobic006G158600 Sobic002G192000--Sobic001G318700 Sobic001G038900 Sobic001G038900 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic001G423800 Sobic001G423800 Sobic002G192000--Sobic001G423800 Sobic003G228900 Sobic003G228900 Sobic001G481100--Sobic003G228900 Sobic001G481100--Sobic006G075400 Sobic001G481100--Sobic001G318700 Sobic007G074000 Sobic007G074000 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic003G202200 Sobic003G202200 Sobic001G481100--Sobic003G202200 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic001G481100--Sobic002G251000 Sobic004G243100--Sobic001G018300 Sobic004G243100--Sobic001G231400 Sobic009G224100 Sobic009G224100 Sobic004G243100--Sobic009G224100 Sobic004G243100--Sobic001G423800 Sobic004G243100--Sobic002G139400 Sobic004G243100--Sobic002G192000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic004G243100--Sobic002G263400 Sobic001G018300--Sobic004G243100 Sobic001G018300--Sobic001G231400 Sobic001G018300--Sobic002G192000 Sobic001G018300--Sobic001G318700 Sobic001G018300--Sobic001G423800 Sobic001G018300--Sobic002G263400 Sobic004G229800 Sobic004G229800 Sobic001G018300--Sobic004G229800 Sobic001G018300--Sobic001G367600 Sobic007G155100 Sobic007G155100 Sobic001G018300--Sobic007G155100 Sobic001G367600--Sobic002G192000 Sobic001G140900 Sobic001G140900 Sobic001G367600--Sobic001G140900 Sobic001G367600--Sobic001G038900 Sobic001G231700 Sobic001G231700 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic006G103000 Sobic006G103000 Sobic001G367600--Sobic006G103000 Sobic002G055700 Sobic002G055700 Sobic001G367600--Sobic002G055700 Sobic002G353900 Sobic002G353900 Sobic001G367600--Sobic002G353900 Sobic002G251000--Sobic004G243100 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic002G251000--Sobic001G231400 Sobic002G251000--Sobic001G018300 Sobic001G192200 Sobic001G192200 Sobic002G251000--Sobic001G192200 Sobic002G251000--Sobic003G282901 Sobic002G251000--Sobic002G140400 Sobic004G189400 Sobic004G189400 Sobic002G251000--Sobic004G189400 Sobic004G191400 Sobic004G191400 Sobic001G079300--Sobic004G191400 Sobic004G191300 Sobic004G191300 Sobic001G079300--Sobic004G191300 Sobic010G209200 Sobic010G209200 Sobic001G079300--Sobic010G209200 Sobic001G079300--Sobic003G228900 Sobic001G138600 Sobic001G138600 Sobic001G079300--Sobic001G138600 Sobic009G122400 Sobic009G122400 Sobic001G079300--Sobic009G122400 Sobic003G260300 Sobic003G260300 Sobic001G079300--Sobic003G260300 Sobic004G141200 Sobic004G141200 Sobic001G079300--Sobic004G141200 Sobic009G184000 Sobic009G184000 Sobic001G079300--Sobic009G184000 Sobic007G017500 Sobic007G017500 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic006G075400--Sobic003G043600 Sobic003G268600 Sobic003G268600 Sobic006G075400--Sobic003G268600 Sobic001G330400 Sobic001G330400 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400
Octagon: transcription factors


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