Gene annotation
Transcriptome id Sobic.004G293200.1
Synonym Sb04g032710
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
zinc finger protein, putative, expressed
UniProt A0A194YS62
Pfam -
Panther DB PTHR31681
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12450 : -
RAP-DB (Rice) LOC_Os02g44280.1 : zinc finger protein, putative, expressed
MaizeGDB (Corn) Zm00025a021396 , Zm00025a003304
Brachypodium PNT69182
Barley HORVU6Hr1G063400.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
2 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
3 Sobic.010G031100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
4 Sobic.001G149800 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
5 Sobic.003G394400 ubiquitin family protein, putative, expressed -
6 Sobic.006G032700 rhodanese-like domain containing protein, putative, expressed -
7 Sobic.007G214400 EF hand family protein, putative, expressed -
8 Sobic.006G230600 expressed protein -
9 Sobic.003G021900 cytochrome P450, putative, expressed K09832: sterol 22-desaturase
10 Sobic.001G371800 expressed protein -
11 Sobic.002G215300 expressed protein -
12 Sobic.004G067600 expressed protein -
13 Sobic.002G068600 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
14 Sobic.001G481500 - -
15 Sobic.001G107800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.007G026600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed -
17 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
18 Sobic.004G166200 expressed protein -
19 Sobic.001G076100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G389000 cytochrome P450 72A1, putative, expressed -


Gene co-expression network
sample Sobic004G293200 Sobic004G293200 Sobic010G032100 Sobic010G032100 Sobic004G293200--Sobic010G032100 Sobic006G230500 Sobic006G230500 Sobic004G293200--Sobic006G230500 Sobic010G031100 Sobic010G031100 Sobic004G293200--Sobic010G031100 Sobic001G149800 Sobic001G149800 Sobic004G293200--Sobic001G149800 Sobic003G394400 Sobic003G394400 Sobic004G293200--Sobic003G394400 Sobic006G032700 Sobic006G032700 Sobic004G293200--Sobic006G032700 Sobic007G214400 Sobic007G214400 Sobic004G293200--Sobic007G214400 Sobic006G230600 Sobic006G230600 Sobic004G293200--Sobic006G230600 Sobic003G021900 Sobic003G021900 Sobic004G293200--Sobic003G021900 Sobic001G397200 Sobic001G397200 Sobic010G032100--Sobic001G397200 Sobic002G068600 Sobic002G068600 Sobic010G032100--Sobic002G068600 Sobic010G032100--Sobic010G031100 Sobic002G261200 Sobic002G261200 Sobic010G032100--Sobic002G261200 Sobic010G032100--Sobic001G149800 Sobic001G309600 Sobic001G309600 Sobic010G032100--Sobic001G309600 Sobic010G032100--Sobic006G032700 Sobic010G032100--Sobic003G394400 Sobic001G481500 Sobic001G481500 Sobic010G032100--Sobic001G481500 Sobic010G086200 Sobic010G086200 Sobic006G230500--Sobic010G086200 Sobic009G200700 Sobic009G200700 Sobic006G230500--Sobic009G200700 Sobic003G382800 Sobic003G382800 Sobic006G230500--Sobic003G382800 Sobic001G387900 Sobic001G387900 Sobic006G230500--Sobic001G387900 Sobic004G177700 Sobic004G177700 Sobic006G230500--Sobic004G177700 Sobic001G320900 Sobic001G320900 Sobic006G230500--Sobic001G320900 Sobic003G148600 Sobic003G148600 Sobic006G230500--Sobic003G148600 Sobic002G423300 Sobic002G423300 Sobic006G230500--Sobic002G423300 Sobic010G217800 Sobic010G217800 Sobic006G230500--Sobic010G217800 Sobic010G031100--Sobic010G032100 Sobic006G230800 Sobic006G230800 Sobic010G031100--Sobic006G230800 Sobic010G031100--Sobic001G149800 Sobic002G215300 Sobic002G215300 Sobic010G031100--Sobic002G215300 Sobic010G031100--Sobic006G032700 Sobic010G031100--Sobic006G230600 Sobic010G031100--Sobic002G261200 Sobic003G138300 Sobic003G138300 Sobic010G031100--Sobic003G138300 Sobic001G254100 Sobic001G254100 Sobic010G031100--Sobic001G254100 Sobic001G149800--Sobic010G032100 Sobic001G149800--Sobic002G068600 Sobic001G149800--Sobic010G031100 Sobic001G149800--Sobic003G394400 Sobic003G086600 Sobic003G086600 Sobic001G149800--Sobic003G086600 Sobic001G149800--Sobic001G254100 Sobic001G107800 Sobic001G107800 Sobic001G149800--Sobic001G107800 Sobic001G149800--Sobic001G481500 Sobic001G149800--Sobic001G309600 Sobic003G394400--Sobic002G068600 Sobic003G394400--Sobic007G214400 Sobic003G394400--Sobic003G086600 Sobic001G371800 Sobic001G371800 Sobic003G394400--Sobic001G371800 Sobic004G166200 Sobic004G166200 Sobic003G394400--Sobic004G166200 Sobic003G394400--Sobic001G107800 Sobic003G355100 Sobic003G355100 Sobic003G394400--Sobic003G355100 Sobic003G394400--Sobic003G148600 Sobic007G214600 Sobic007G214600 Sobic003G394400--Sobic007G214600 Sobic006G032700--Sobic003G138300 Sobic006G032700--Sobic010G032100 Sobic006G032700--Sobic001G309600 Sobic006G032700--Sobic001G397200 Sobic006G032700--Sobic001G481500 Sobic001G354200 Sobic001G354200 Sobic006G032700--Sobic001G354200 Sobic006G032700--Sobic010G031100 Sobic006G032700--Sobic002G215300 Sobic006G032700--Sobic001G149800 Sobic007G214400--Sobic003G394400 Sobic007G214400--Sobic001G371800 Sobic002G389000 Sobic002G389000 Sobic007G214400--Sobic002G389000 Sobic007G214400--Sobic001G107800 Sobic007G214400--Sobic002G068600 Sobic007G214400--Sobic001G254100 Sobic007G214400--Sobic002G261200 Sobic007G214400--Sobic003G086600 Sobic007G214400--Sobic007G214600 Sobic006G230600--Sobic002G389000 Sobic006G230600--Sobic001G371800 Sobic006G230600--Sobic001G107800 Sobic001G076100 Sobic001G076100 Sobic006G230600--Sobic001G076100 Sobic006G230600--Sobic007G214400 Sobic006G230600--Sobic003G394400 Sobic004G088300 Sobic004G088300 Sobic006G230600--Sobic004G088300 Sobic006G230600--Sobic006G230800 Sobic006G230600--Sobic010G031100 Sobic003G021900--Sobic010G031100 Sobic009G148100 Sobic009G148100 Sobic003G021900--Sobic009G148100 Sobic003G021900--Sobic010G032100 Sobic006G249300 Sobic006G249300 Sobic003G021900--Sobic006G249300 Sobic003G021900--Sobic002G215300 Sobic003G021900--Sobic003G138300 Sobic003G021900--Sobic001G309600 Sobic002G323300 Sobic002G323300 Sobic003G021900--Sobic002G323300 Sobic004G336500 Sobic004G336500 Sobic003G021900--Sobic004G336500
Octagon: transcription factors


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