Gene annotation
Transcriptome id Sobic.006G147900.1
Synonym Sb06g022650
Functional annotation expressed protein
UniProt C5YCC7
Pfam -
Panther DB PTHR33210 PTHR33210:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20515 : -
RAP-DB (Rice) LOC_Os04g43670.1 : expressed protein
MaizeGDB (Corn) Zm00025a010713
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G108400 heavy-metal-associated domain-containing protein, putative, expressed -
2 Sobic.002G221400 ZOS9-14 - C2H2 zinc finger protein, expressed -
3 Sobic.004G266800 ZF-HD protein dimerisation region containing protein, expressed -
4 Sobic.004G313900 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
5 Sobic.004G329000 OsSCP10 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
6 Sobic.003G251700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed K14486: K14486, auxin response factor
7 Sobic.002G286100 DUF292 domain containing protein, expressed -
8 Sobic.009G257900 expressed protein -
9 Sobic.006G163600 Trihelix Family(PubMedID : 24864043)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.003G320300 ZOS1-12 - C2H2 zinc finger protein, expressed -
11 Sobic.001G059900 type I inositol-1,4,5-trisphosphate 5-phosphatase, putative, expressed -
12 Sobic.009G127800 BZIP protein, putative, expressed -
13 Sobic.004G205300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
14 Sobic.003G387300 ABC-2 type transporter domain containing protein, expressed -
15 Sobic.002G394200 expressed protein K15711: SMARCA3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3
16 Sobic.004G234500 eukaryotic aspartyl protease domain containing protein, expressed -
17 Sobic.001G452900 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
18 Sobic.007G162400 ABC-2 type transporter domain containing protein, expressed -
19 Sobic.008G114500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
20 Sobic.006G135800 peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic006G147900 Sobic006G147900 Sobic004G108400 Sobic004G108400 Sobic006G147900--Sobic004G108400 Sobic002G221400 Sobic002G221400 Sobic006G147900--Sobic002G221400 Sobic004G266800 Sobic004G266800 Sobic006G147900--Sobic004G266800 Sobic004G313900 Sobic004G313900 Sobic006G147900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic006G147900--Sobic004G329000 Sobic003G251700 Sobic003G251700 Sobic006G147900--Sobic003G251700 Sobic002G286100 Sobic002G286100 Sobic006G147900--Sobic002G286100 Sobic009G257900 Sobic009G257900 Sobic006G147900--Sobic009G257900 Sobic006G163600 Sobic006G163600 Sobic006G147900--Sobic006G163600 Sobic001G054700 Sobic001G054700 Sobic004G108400--Sobic001G054700 Sobic006G221300 Sobic006G221300 Sobic004G108400--Sobic006G221300 Sobic009G143200 Sobic009G143200 Sobic004G108400--Sobic009G143200 Sobic001G452900 Sobic001G452900 Sobic004G108400--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic004G108400--Sobic007G008300 Sobic009G127800 Sobic009G127800 Sobic004G108400--Sobic009G127800 Sobic007G162400 Sobic007G162400 Sobic004G108400--Sobic007G162400 Sobic002G050700 Sobic002G050700 Sobic004G108400--Sobic002G050700 Sobic009G101100 Sobic009G101100 Sobic004G108400--Sobic009G101100 Sobic006G108000 Sobic006G108000 Sobic002G221400--Sobic006G108000 Sobic004G115600 Sobic004G115600 Sobic002G221400--Sobic004G115600 Sobic002G221400--Sobic004G266800 Sobic002G221400--Sobic006G163600 Sobic002G221400--Sobic006G147900 Sobic006G278400 Sobic006G278400 Sobic002G221400--Sobic006G278400 Sobic003G406500 Sobic003G406500 Sobic002G221400--Sobic003G406500 Sobic003G301200 Sobic003G301200 Sobic002G221400--Sobic003G301200 Sobic001G331100 Sobic001G331100 Sobic002G221400--Sobic001G331100 Sobic002G279400 Sobic002G279400 Sobic004G266800--Sobic002G279400 Sobic004G266800--Sobic002G221400 Sobic004G266800--Sobic004G108400 Sobic004G266800--Sobic004G313900 Sobic003G387300 Sobic003G387300 Sobic004G266800--Sobic003G387300 Sobic004G266800--Sobic006G147900 Sobic002G394200 Sobic002G394200 Sobic004G266800--Sobic002G394200 Sobic009G057800 Sobic009G057800 Sobic004G266800--Sobic009G057800 Sobic009G188500 Sobic009G188500 Sobic004G266800--Sobic009G188500 Sobic006G058000 Sobic006G058000 Sobic004G313900--Sobic006G058000 Sobic004G317200 Sobic004G317200 Sobic004G313900--Sobic004G317200 Sobic004G313900--Sobic009G257900 Sobic001G390400 Sobic001G390400 Sobic004G313900--Sobic001G390400 Sobic003G366000 Sobic003G366000 Sobic004G313900--Sobic003G366000 Sobic005G092700 Sobic005G092700 Sobic004G313900--Sobic005G092700 Sobic004G234500 Sobic004G234500 Sobic004G313900--Sobic004G234500 Sobic004G313900--Sobic004G108400 Sobic004G269100 Sobic004G269100 Sobic004G313900--Sobic004G269100 Sobic004G329000--Sobic009G257900 Sobic003G351900 Sobic003G351900 Sobic004G329000--Sobic003G351900 Sobic004G113900 Sobic004G113900 Sobic004G329000--Sobic004G113900 Sobic004G329000--Sobic003G251700 Sobic006G142500 Sobic006G142500 Sobic004G329000--Sobic006G142500 Sobic004G164700 Sobic004G164700 Sobic004G329000--Sobic004G164700 Sobic008G190000 Sobic008G190000 Sobic004G329000--Sobic008G190000 Sobic006G050900 Sobic006G050900 Sobic004G329000--Sobic006G050900 Sobic004G329000--Sobic001G452900 Sobic006G172000 Sobic006G172000 Sobic003G251700--Sobic006G172000 Sobic003G251700--Sobic004G269100 Sobic004G215100 Sobic004G215100 Sobic003G251700--Sobic004G215100 Sobic001G493100 Sobic001G493100 Sobic003G251700--Sobic001G493100 Sobic006G135800 Sobic006G135800 Sobic003G251700--Sobic006G135800 Sobic002G259200 Sobic002G259200 Sobic003G251700--Sobic002G259200 Sobic006G226000 Sobic006G226000 Sobic003G251700--Sobic006G226000 Sobic003G251700--Sobic005G092700 Sobic006G041700 Sobic006G041700 Sobic003G251700--Sobic006G041700 Sobic002G286100--Sobic004G108400 Sobic009G084100 Sobic009G084100 Sobic002G286100--Sobic009G084100 Sobic003G320300 Sobic003G320300 Sobic002G286100--Sobic003G320300 Sobic005G157300 Sobic005G157300 Sobic002G286100--Sobic005G157300 Sobic001G295400 Sobic001G295400 Sobic002G286100--Sobic001G295400 Sobic009G225500 Sobic009G225500 Sobic002G286100--Sobic009G225500 Sobic002G286100--Sobic001G452900 Sobic002G286100--Sobic007G008300 Sobic009G172950 Sobic009G172950 Sobic002G286100--Sobic009G172950 Sobic009G257900--Sobic004G317200 Sobic009G257900--Sobic004G108400 Sobic009G025400 Sobic009G025400 Sobic009G257900--Sobic009G025400 Sobic005G129600 Sobic005G129600 Sobic009G257900--Sobic005G129600 Sobic009G257900--Sobic004G313900 Sobic009G257900--Sobic004G329000 Sobic009G257900--Sobic001G390400 Sobic004G357000 Sobic004G357000 Sobic009G257900--Sobic004G357000 Sobic009G257900--Sobic004G113900 Sobic006G163600--Sobic003G301200 Sobic010G189800 Sobic010G189800 Sobic006G163600--Sobic010G189800 Sobic007G081300 Sobic007G081300 Sobic006G163600--Sobic007G081300 Sobic010G191100 Sobic010G191100 Sobic006G163600--Sobic010G191100 Sobic006G163600--Sobic002G221400 Sobic006G163600--Sobic006G278400 Sobic008G137500 Sobic008G137500 Sobic006G163600--Sobic008G137500 Sobic004G155900 Sobic004G155900 Sobic006G163600--Sobic004G155900 Sobic006G247500 Sobic006G247500 Sobic006G163600--Sobic006G247500
Octagon: transcription factors


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