Gene annotation
Transcriptome id Sobic.001G047900.1
Synonym Sb01g004400
Functional annotation expressed protein
UniProt C5WW62
Pfam PF05910
Panther DB PTHR31972 PTHR31972:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G28150 : Plant protein of unknown function (DUF868)
RAP-DB (Rice) LOC_Os03g59200.1 : expressed protein
MaizeGDB (Corn) Zm00025a016523 , Zm00025a008650
Brachypodium KQK12593 , KQK20422
Barley HORVU5Hr1G109570.1
Wheat TraesCS5D02G467300 , TraesCS5B02G465500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G288500 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
2 Sobic.001G073150 - K15449: tRNA wybutosine-synthesizing protein 1
3 Sobic.001G388000 GTPase-activating protein, putative, expressed -
4 Sobic.001G461200 DUF538 domain containing protein, putative, expressed -
5 Sobic.006G274866 - -
6 Sobic.008G039800 rhoGAP domain containing protein, expressed -
7 Sobic.006G178800 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.005G130700 expressed protein -
9 Sobic.006G062300 Leucine Rich Repeat family protein, expressed -
10 Sobic.001G037400 expressed protein -
11 Sobic.004G007800 protein kinase, putative, expressed -
12 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
13 Sobic.009G251100 TTL1, putative, expressed K09527: DnaJ homolog subfamily C member 7
14 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
16 Sobic.002G393200 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.003G031400 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
20 Sobic.002G083600 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage


Gene co-expression network
sample Sobic001G047900 Sobic001G047900 Sobic004G288500 Sobic004G288500 Sobic001G047900--Sobic004G288500 Sobic001G073150 Sobic001G073150 Sobic001G047900--Sobic001G073150 Sobic001G388000 Sobic001G388000 Sobic001G047900--Sobic001G388000 Sobic001G461200 Sobic001G461200 Sobic001G047900--Sobic001G461200 Sobic006G274866 Sobic006G274866 Sobic001G047900--Sobic006G274866 Sobic008G039800 Sobic008G039800 Sobic001G047900--Sobic008G039800 Sobic006G178800 Sobic006G178800 Sobic001G047900--Sobic006G178800 Sobic005G130700 Sobic005G130700 Sobic001G047900--Sobic005G130700 Sobic006G062300 Sobic006G062300 Sobic001G047900--Sobic006G062300 Sobic001G037400 Sobic001G037400 Sobic004G288500--Sobic001G037400 Sobic009G134000 Sobic009G134000 Sobic004G288500--Sobic009G134000 Sobic005G110600 Sobic005G110600 Sobic004G288500--Sobic005G110600 Sobic001G253900 Sobic001G253900 Sobic004G288500--Sobic001G253900 Sobic001G451800 Sobic001G451800 Sobic004G288500--Sobic001G451800 Sobic003G277200 Sobic003G277200 Sobic004G288500--Sobic003G277200 Sobic003G419600 Sobic003G419600 Sobic004G288500--Sobic003G419600 Sobic001G140800 Sobic001G140800 Sobic004G288500--Sobic001G140800 Sobic004G288500--Sobic005G130700 Sobic010G120300 Sobic010G120300 Sobic001G073150--Sobic010G120300 Sobic010G090500 Sobic010G090500 Sobic001G073150--Sobic010G090500 Sobic003G198500 Sobic003G198500 Sobic001G073150--Sobic003G198500 Sobic008G191500 Sobic008G191500 Sobic001G073150--Sobic008G191500 Sobic010G096100 Sobic010G096100 Sobic001G073150--Sobic010G096100 Sobic009G125900 Sobic009G125900 Sobic001G073150--Sobic009G125900 Sobic009G251100 Sobic009G251100 Sobic001G073150--Sobic009G251100 Sobic001G159800 Sobic001G159800 Sobic001G073150--Sobic001G159800 Sobic008G174900 Sobic008G174900 Sobic001G073150--Sobic008G174900 Sobic010G133932 Sobic010G133932 Sobic001G388000--Sobic010G133932 Sobic001G388000--Sobic001G140800 Sobic005G145100 Sobic005G145100 Sobic001G388000--Sobic005G145100 Sobic005G112000 Sobic005G112000 Sobic001G388000--Sobic005G112000 Sobic003G366300 Sobic003G366300 Sobic001G388000--Sobic003G366300 Sobic001G388000--Sobic005G110600 Sobic004G290300 Sobic004G290300 Sobic001G388000--Sobic004G290300 Sobic003G239100 Sobic003G239100 Sobic001G388000--Sobic003G239100 Sobic001G484000 Sobic001G484000 Sobic001G388000--Sobic001G484000 Sobic003G030700 Sobic003G030700 Sobic001G461200--Sobic003G030700 Sobic008G148500 Sobic008G148500 Sobic001G461200--Sobic008G148500 Sobic001G461200--Sobic001G047900 Sobic001G461200--Sobic004G288500 Sobic009G175200 Sobic009G175200 Sobic001G461200--Sobic009G175200 Sobic008G064601 Sobic008G064601 Sobic001G461200--Sobic008G064601 Sobic001G461200--Sobic008G039800 Sobic004G044100 Sobic004G044100 Sobic001G461200--Sobic004G044100 Sobic001G461200--Sobic009G134000 Sobic002G142500 Sobic002G142500 Sobic006G274866--Sobic002G142500 Sobic010G165100 Sobic010G165100 Sobic006G274866--Sobic010G165100 Sobic001G389600 Sobic001G389600 Sobic006G274866--Sobic001G389600 Sobic002G311000 Sobic002G311000 Sobic006G274866--Sobic002G311000 Sobic006G274866--Sobic003G277200 Sobic002G045200 Sobic002G045200 Sobic006G274866--Sobic002G045200 Sobic006G257200 Sobic006G257200 Sobic006G274866--Sobic006G257200 Sobic002G246000 Sobic002G246000 Sobic006G274866--Sobic002G246000 Sobic002G001100 Sobic002G001100 Sobic006G274866--Sobic002G001100 Sobic008G039800--Sobic003G277200 Sobic008G039800--Sobic001G037400 Sobic009G242501 Sobic009G242501 Sobic008G039800--Sobic009G242501 Sobic001G285200 Sobic001G285200 Sobic008G039800--Sobic001G285200 Sobic010G216600 Sobic010G216600 Sobic008G039800--Sobic010G216600 Sobic009G211800 Sobic009G211800 Sobic008G039800--Sobic009G211800 Sobic008G096200 Sobic008G096200 Sobic008G039800--Sobic008G096200 Sobic003G013000 Sobic003G013000 Sobic008G039800--Sobic003G013000 Sobic001G196000 Sobic001G196000 Sobic008G039800--Sobic001G196000 Sobic006G178800--Sobic009G134000 Sobic010G143300 Sobic010G143300 Sobic006G178800--Sobic010G143300 Sobic003G333000 Sobic003G333000 Sobic006G178800--Sobic003G333000 Sobic007G113900 Sobic007G113900 Sobic006G178800--Sobic007G113900 Sobic002G396200 Sobic002G396200 Sobic006G178800--Sobic002G396200 Sobic006G178800--Sobic002G142500 Sobic010G207700 Sobic010G207700 Sobic006G178800--Sobic010G207700 Sobic006G178800--Sobic004G044100 Sobic005G227050 Sobic005G227050 Sobic006G178800--Sobic005G227050 Sobic005G130700--Sobic005G110600 Sobic005G130700--Sobic006G062300 Sobic010G116100 Sobic010G116100 Sobic005G130700--Sobic010G116100 Sobic005G130700--Sobic003G419600 Sobic005G130700--Sobic001G140800 Sobic005G130700--Sobic003G277200 Sobic005G130700--Sobic009G134000 Sobic006G245600 Sobic006G245600 Sobic005G130700--Sobic006G245600 Sobic003G272900 Sobic003G272900 Sobic005G130700--Sobic003G272900 Sobic006G062300--Sobic005G130700 Sobic006G062300--Sobic005G110600 Sobic006G062300--Sobic010G116100 Sobic006G062300--Sobic003G419600 Sobic010G007000 Sobic010G007000 Sobic006G062300--Sobic010G007000 Sobic006G062300--Sobic001G140800 Sobic008G170400 Sobic008G170400 Sobic006G062300--Sobic008G170400 Sobic004G297950 Sobic004G297950 Sobic006G062300--Sobic004G297950 Sobic007G202100 Sobic007G202100 Sobic006G062300--Sobic007G202100
Octagon: transcription factors


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