Gene annotation
Transcriptome id Sobic.010G181500.1
Synonym Sb10g023290, KCS11
Functional annotation 3-ketoacyl-CoA synthase, putative, expressed
UniProt C5Z5K2
Pfam PF08541 PF08392
Panther DB PTHR31561 PTHR31561:SF8
NCBI CDD -
KEGG Orthology K15397; 3-ketoacyl-CoA synthase
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups GO:0008610lipid biosynthetic process GO:0016020membrane GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT2G26640 : 3-ketoacyl-CoA synthase 11
RAP-DB (Rice) LOC_Os06g39750.3 : 3-ketoacyl-CoA synthase, putative, expressed
MaizeGDB (Corn) Zm00025a051234 , Zm00025a020257 , Zm00025a006916 , Zm00025a036645 , Zm00025a017777 , Zm00025a000774
Brachypodium PNT75706 , KQK04806 , KQJ93957 , KQJ96727 , PNT66146 , KQK17805 , KQK23503
Barley HORVU4Hr1G076940.1 , HORVU6Hr1G036950.11 , HORVU6Hr1G036950.10 , HORVU1Hr1G089710.1 , HORVU1Hr1G089710.2 , HORVU1Hr1G089710.3 , HORVU4Hr1G073840.2 , HORVU4Hr1G073840.5 , HORVU4Hr1G073840.6 , HORVU4Hr1G073840.8 , HORVU6Hr1G036950.7 , HORVU6Hr1G036950.6 , HORVU6Hr1G036950.5 , HORVU6Hr1G036950.4 , HORVU6Hr1G036950.8 , HORVU7Hr1G084610.10 , HORVU7Hr1G084610.11 , HORVU7Hr1G084610.1 , HORVU7Hr1G084610.2 , HORVU7Hr1G084610.3 , HORVU7Hr1G084610.4 , HORVU7Hr1G084610.5 , HORVU7Hr1G084610.6 , HORVU7Hr1G084610.7 , HORVU7Hr1G084610.8 , HORVU7Hr1G084610.9 , HORVU1Hr1G090730.1 , HORVU4Hr1G076940.4 , HORVU4Hr1G076940.3 , HORVU6Hr1G036950.9 , HORVU4Hr1G063420.5 , HORVU4Hr1G063420.3 , HORVU4Hr1G063420.2 , HORVU4Hr1G063420.1
Wheat TraesCS4D02G296400 , TraesCS4D02G277300 , TraesCS6A02G177700 , TraesCS4A02G025300 , TraesCS4B02G278800 , TraesCS4A02G007400
Populus -


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cDNA sequences
Sobic.010G181500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G419700 classical arabinogalactan protein 26 precursor, putative, expressed -
2 Sobic.010G010900 expressed protein -
3 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
4 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
5 Sobic.001G083500 plastocyanin-like domain containing protein, putative, expressed -
6 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
7 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
10 Sobic.009G175100 inactive receptor kinase At2g26730 precursor, putative, expressed -
11 Sobic.003G052000 carboxyl-terminal proteinase, putative, expressed -
12 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
13 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
15 Sobic.001G488900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
16 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -
17 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.004G246500 ATMAP70 protein, putative, expressed -
19 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
20 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -


Gene co-expression network
sample Sobic010G181500 Sobic010G181500 Sobic003G419700 Sobic003G419700 Sobic010G181500--Sobic003G419700 Sobic010G010900 Sobic010G010900 Sobic010G181500--Sobic010G010900 Sobic001G074000 Sobic001G074000 Sobic010G181500--Sobic001G074000 Sobic001G522300 Sobic001G522300 Sobic010G181500--Sobic001G522300 Sobic001G083500 Sobic001G083500 Sobic010G181500--Sobic001G083500 Sobic010G111200 Sobic010G111200 Sobic010G181500--Sobic010G111200 Sobic003G338200 Sobic003G338200 Sobic010G181500--Sobic003G338200 Sobic005G104100 Sobic005G104100 Sobic010G181500--Sobic005G104100 Sobic003G360700 Sobic003G360700 Sobic010G181500--Sobic003G360700 Sobic003G419700--Sobic001G522300 Sobic003G419700--Sobic003G338200 Sobic003G419700--Sobic010G111200 Sobic003G419700--Sobic010G181500 Sobic010G216600 Sobic010G216600 Sobic003G419700--Sobic010G216600 Sobic003G419700--Sobic001G074000 Sobic004G313200 Sobic004G313200 Sobic003G419700--Sobic004G313200 Sobic003G013000 Sobic003G013000 Sobic003G419700--Sobic003G013000 Sobic004G248100 Sobic004G248100 Sobic003G419700--Sobic004G248100 Sobic001G488900 Sobic001G488900 Sobic010G010900--Sobic001G488900 Sobic006G272500 Sobic006G272500 Sobic010G010900--Sobic006G272500 Sobic003G309400 Sobic003G309400 Sobic010G010900--Sobic003G309400 Sobic002G419200 Sobic002G419200 Sobic010G010900--Sobic002G419200 Sobic003G300400 Sobic003G300400 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic001G267800 Sobic001G267800 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic001G074000--Sobic001G522300 Sobic003G070600 Sobic003G070600 Sobic001G074000--Sobic003G070600 Sobic009G129700 Sobic009G129700 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic001G074000--Sobic001G199400 Sobic001G493900 Sobic001G493900 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic010G020600 Sobic010G020600 Sobic001G074000--Sobic010G020600 Sobic001G522300--Sobic001G074000 Sobic007G116800 Sobic007G116800 Sobic001G522300--Sobic007G116800 Sobic001G522300--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic001G083500--Sobic004G313200 Sobic002G335900 Sobic002G335900 Sobic001G083500--Sobic002G335900 Sobic009G088700 Sobic009G088700 Sobic001G083500--Sobic009G088700 Sobic002G337600 Sobic002G337600 Sobic001G083500--Sobic002G337600 Sobic001G083500--Sobic001G074000 Sobic002G160800 Sobic002G160800 Sobic001G083500--Sobic002G160800 Sobic001G452900 Sobic001G452900 Sobic001G083500--Sobic001G452900 Sobic003G100700 Sobic003G100700 Sobic001G083500--Sobic003G100700 Sobic001G083500--Sobic001G199400 Sobic001G299600 Sobic001G299600 Sobic010G111200--Sobic001G299600 Sobic010G111200--Sobic010G216600 Sobic001G540900 Sobic001G540900 Sobic010G111200--Sobic001G540900 Sobic010G111200--Sobic004G313200 Sobic002G222500 Sobic002G222500 Sobic010G111200--Sobic002G222500 Sobic002G426800 Sobic002G426800 Sobic010G111200--Sobic002G426800 Sobic003G260700 Sobic003G260700 Sobic010G111200--Sobic003G260700 Sobic003G328500 Sobic003G328500 Sobic010G111200--Sobic003G328500 Sobic002G394500 Sobic002G394500 Sobic010G111200--Sobic002G394500 Sobic003G338200--Sobic002G032500 Sobic003G338200--Sobic002G419200 Sobic003G338200--Sobic003G309400 Sobic003G338200--Sobic004G248100 Sobic001G345200 Sobic001G345200 Sobic003G338200--Sobic001G345200 Sobic003G116100 Sobic003G116100 Sobic003G338200--Sobic003G116100 Sobic007G094200 Sobic007G094200 Sobic003G338200--Sobic007G094200 Sobic003G277200 Sobic003G277200 Sobic003G338200--Sobic003G277200 Sobic003G338200--Sobic003G300400 Sobic003G283400 Sobic003G283400 Sobic005G104100--Sobic003G283400 Sobic004G344100 Sobic004G344100 Sobic005G104100--Sobic004G344100 Sobic001G298800 Sobic001G298800 Sobic005G104100--Sobic001G298800 Sobic005G104100--Sobic009G129700 Sobic005G104100--Sobic001G074000 Sobic001G221900 Sobic001G221900 Sobic005G104100--Sobic001G221900 Sobic005G104100--Sobic001G522300 Sobic003G072400 Sobic003G072400 Sobic005G104100--Sobic003G072400 Sobic005G104100--Sobic010G181500 Sobic003G360700--Sobic009G235700 Sobic003G360700--Sobic001G221900 Sobic003G360700--Sobic009G172700 Sobic003G360700--Sobic001G074000 Sobic003G360700--Sobic002G419200 Sobic004G274600 Sobic004G274600 Sobic003G360700--Sobic004G274600 Sobic003G360700--Sobic001G522300 Sobic003G360700--Sobic004G283800 Sobic003G360700--Sobic010G020600
Octagon: transcription factors


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