Gene annotation
Transcriptome id Sobic.001G488900.1
Synonym ATHB13, Sb01g045740
Functional annotation homeobox associated leucine zipper, putative, expressed
UniProt C5WVY2
Pfam PF02183 PF00046
Panther DB PTHR24326 PTHR24326:SF176
NCBI CDD KOG0483; Transcription factor HEX, contains HOX and HALZ domains
KEGG Orthology K09338; homeobox-leucine zipper protein
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity GO:0003677DNA binding


Orthologs (automatic annotation)
TAIR AT1G69780 : Homeobox-leucine zipper protein family
RAP-DB (Rice) LOC_Os03g07450.1 : homeobox associated leucine zipper, putative, expressed
MaizeGDB (Corn) Zm00025a000859 , Zm00025a017816 , Zm00025a010383 , Zm00025a056627 , Zm00025a053332 , Zm00025a007007
Brachypodium KQJ83857 , KQK00550 , KQK23405
Barley HORVU4Hr1G075180.3 , HORVU4Hr1G075180.2 , HORVU4Hr1G075180.1 , HORVU4Hr1G075180.7 , HORVU4Hr1G075180.6 , HORVU4Hr1G075180.5 , HORVU4Hr1G075180.4 , HORVU4Hr1G075170.2 , HORVU4Hr1G075170.1
Wheat TraesCS4A02G016600 , TraesCS4B02G287600 , TraesCS4D02G286400 , TraesCS4D02G286400
Populus -


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cDNA sequences
Sobic.001G488900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G299600 GATA zinc finger domain containing protein, expressed -
2 Sobic.010G010900 expressed protein -
3 Sobic.007G180200 NC domain-containing protein, putative, expressed -
4 Sobic.001G199400 monocopper oxidase, putative, expressed -
5 Sobic.005G199700 leucine-rich repeat family protein, putative, expressed -
6 Sobic.003G356600 ATROPGEF7/ROPGEF7, putative, expressed -
7 Sobic.003G052000 carboxyl-terminal proteinase, putative, expressed -
8 Sobic.009G146700 universal stress protein domain containing protein, putative, expressed -
9 Sobic.006G219500 remorin family protein, putative, expressed -
10 Sobic.009G172700 expressed protein -
11 Sobic.007G165800 SLG(Ortholog in rice:Feng et al. (2016))(PubMedID : 31659908)@transferase family protein, putative, expressed -
12 Sobic.002G363300 - -
13 Sobic.001G286700 homeobox and START domains containing protein, putative, expressed -
14 Sobic.002G227900 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.003G027100 keratin, type I cytoskeletal 9, putative, expressed -
16 Sobic.003G309400 OsSub4 - Putative Subtilisin homologue, expressed -
17 Sobic.002G032500 leucine-rich repeat family protein, putative, expressed -
18 Sobic.001G493900 beta-galactosidase, putative, expressed -
19 Sobic.003G338700 LTPL16 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.003G089300 heavy-metal-associated domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G488900 Sobic001G488900 Sobic001G299600 Sobic001G299600 Sobic001G488900--Sobic001G299600 Sobic010G010900 Sobic010G010900 Sobic001G488900--Sobic010G010900 Sobic007G180200 Sobic007G180200 Sobic001G488900--Sobic007G180200 Sobic001G199400 Sobic001G199400 Sobic001G488900--Sobic001G199400 Sobic005G199700 Sobic005G199700 Sobic001G488900--Sobic005G199700 Sobic003G356600 Sobic003G356600 Sobic001G488900--Sobic003G356600 Sobic003G052000 Sobic003G052000 Sobic001G488900--Sobic003G052000 Sobic009G146700 Sobic009G146700 Sobic001G488900--Sobic009G146700 Sobic006G219500 Sobic006G219500 Sobic001G488900--Sobic006G219500 Sobic001G299600--Sobic007G180200 Sobic010G014500 Sobic010G014500 Sobic001G299600--Sobic010G014500 Sobic001G299600--Sobic001G488900 Sobic003G338700 Sobic003G338700 Sobic001G299600--Sobic003G338700 Sobic001G299600--Sobic005G199700 Sobic001G299600--Sobic001G199400 Sobic001G155700 Sobic001G155700 Sobic001G299600--Sobic001G155700 Sobic007G165800 Sobic007G165800 Sobic001G299600--Sobic007G165800 Sobic001G493900 Sobic001G493900 Sobic001G299600--Sobic001G493900 Sobic010G010900--Sobic001G488900 Sobic006G272500 Sobic006G272500 Sobic010G010900--Sobic006G272500 Sobic003G309400 Sobic003G309400 Sobic010G010900--Sobic003G309400 Sobic002G419200 Sobic002G419200 Sobic010G010900--Sobic002G419200 Sobic003G300400 Sobic003G300400 Sobic010G010900--Sobic003G300400 Sobic009G172700 Sobic009G172700 Sobic010G010900--Sobic009G172700 Sobic001G267800 Sobic001G267800 Sobic010G010900--Sobic001G267800 Sobic002G032500 Sobic002G032500 Sobic010G010900--Sobic002G032500 Sobic002G071850 Sobic002G071850 Sobic010G010900--Sobic002G071850 Sobic007G180200--Sobic005G199700 Sobic007G180200--Sobic007G165800 Sobic007G180200--Sobic001G299600 Sobic007G180200--Sobic003G338700 Sobic003G027100 Sobic003G027100 Sobic007G180200--Sobic003G027100 Sobic007G180200--Sobic009G146700 Sobic007G180200--Sobic001G199400 Sobic010G014700 Sobic010G014700 Sobic007G180200--Sobic010G014700 Sobic010G235300 Sobic010G235300 Sobic007G180200--Sobic010G235300 Sobic001G199400--Sobic010G014700 Sobic003G113500 Sobic003G113500 Sobic001G199400--Sobic003G113500 Sobic001G199400--Sobic003G027100 Sobic001G199400--Sobic003G338700 Sobic001G199400--Sobic007G165800 Sobic010G078700 Sobic010G078700 Sobic001G199400--Sobic010G078700 Sobic003G070600 Sobic003G070600 Sobic001G199400--Sobic003G070600 Sobic001G199400--Sobic007G180200 Sobic001G074000 Sobic001G074000 Sobic001G199400--Sobic001G074000 Sobic005G199700--Sobic009G146700 Sobic005G199700--Sobic003G338700 Sobic002G363300 Sobic002G363300 Sobic005G199700--Sobic002G363300 Sobic005G199700--Sobic007G180200 Sobic001G286700 Sobic001G286700 Sobic005G199700--Sobic001G286700 Sobic006G273600 Sobic006G273600 Sobic005G199700--Sobic006G273600 Sobic003G010700 Sobic003G010700 Sobic005G199700--Sobic003G010700 Sobic005G199700--Sobic003G027100 Sobic005G199700--Sobic010G014700 Sobic004G274600 Sobic004G274600 Sobic003G356600--Sobic004G274600 Sobic004G211700 Sobic004G211700 Sobic003G356600--Sobic004G211700 Sobic003G356600--Sobic002G363300 Sobic003G356600--Sobic001G199400 Sobic008G008100 Sobic008G008100 Sobic003G356600--Sobic008G008100 Sobic003G356600--Sobic009G146700 Sobic003G356600--Sobic003G070600 Sobic002G312200 Sobic002G312200 Sobic003G356600--Sobic002G312200 Sobic003G356600--Sobic010G014700 Sobic003G052000--Sobic001G488900 Sobic002G313000 Sobic002G313000 Sobic003G052000--Sobic002G313000 Sobic003G052000--Sobic010G010900 Sobic010G129700 Sobic010G129700 Sobic003G052000--Sobic010G129700 Sobic003G052000--Sobic001G299600 Sobic001G075400 Sobic001G075400 Sobic003G052000--Sobic001G075400 Sobic001G140600 Sobic001G140600 Sobic003G052000--Sobic001G140600 Sobic010G181500 Sobic010G181500 Sobic003G052000--Sobic010G181500 Sobic003G052000--Sobic002G071850 Sobic009G146700--Sobic005G199700 Sobic009G146700--Sobic003G338700 Sobic009G146700--Sobic002G363300 Sobic009G146700--Sobic010G014700 Sobic009G146700--Sobic003G010700 Sobic009G146700--Sobic001G286700 Sobic009G146700--Sobic007G180200 Sobic006G107500 Sobic006G107500 Sobic009G146700--Sobic006G107500 Sobic009G146700--Sobic010G014500 Sobic008G114900 Sobic008G114900 Sobic006G219500--Sobic008G114900 Sobic006G219500--Sobic001G155700 Sobic006G219500--Sobic001G493900 Sobic006G219500--Sobic010G129700 Sobic006G219500--Sobic009G146700 Sobic006G219500--Sobic002G313000 Sobic002G319300 Sobic002G319300 Sobic006G219500--Sobic002G319300 Sobic008G125700 Sobic008G125700 Sobic006G219500--Sobic008G125700 Sobic001G496400 Sobic001G496400 Sobic006G219500--Sobic001G496400
Octagon: transcription factors


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