Gene annotation
Transcriptome id Sobic.009G195600.1
Synonym Sb09g025400, ATRAC7, ROP9, ARAC7, ATROP9, RAC7
Functional annotation ras-related protein, putative, expressed
UniProt C5Z0W8
Pfam PF08477
Panther DB PTHR24072 PTHR24072:SF127
NCBI CDD KOG0393; Ras-related small GTPase, Rho type
KEGG Orthology K04392; Ras-related C3 botulinum toxin substrate 1
Gene Ontology GO:0007264; small GTPase mediated signal transduction GO:0005525GTP binding


Orthologs (automatic annotation)
TAIR AT4G28950 : RHO-related protein from plants 9
RAP-DB (Rice) LOC_Os05g43820.1 : ras-related protein, putative, expressed
MaizeGDB (Corn) Zm00025a049438 , Zm00025a044215 , Zm00025a022001 , Zm00025a037935
Brachypodium KQK05418 , KQK01965 , KQK01966
Barley HORVU6Hr1G076210.8 , HORVU6Hr1G076210.9 , HORVU6Hr1G076210.4 , HORVU6Hr1G076210.5 , HORVU6Hr1G076210.6 , HORVU6Hr1G076210.7 , HORVU6Hr1G076210.1 , HORVU6Hr1G076210.2 , HORVU6Hr1G076210.3 , HORVU7Hr1G038980.9 , HORVU7Hr1G038980.5 , HORVU7Hr1G038980.1 , HORVU3Hr1G052560.1 , HORVU3Hr1G052560.3 , HORVU3Hr1G052560.2 , HORVU3Hr1G052560.5 , HORVU3Hr1G052560.4 , HORVU3Hr1G052560.6 , HORVU1Hr1G076880.10 , HORVU1Hr1G076880.11 , HORVU1Hr1G076880.9 , HORVU1Hr1G076880.6 , HORVU1Hr1G076880.7 , HORVU1Hr1G076880.4 , HORVU1Hr1G076880.5 , HORVU1Hr1G076880.3 , HORVU1Hr1G076880.1 , HORVU7Hr1G038980.17 , HORVU7Hr1G038980.16 , HORVU7Hr1G038980.15 , HORVU7Hr1G038980.14 , HORVU7Hr1G038980.13 , HORVU7Hr1G038980.12 , HORVU7Hr1G038980.11 , HORVU7Hr1G038980.10 , HORVU7Hr1G038980.18
Wheat TraesCS3D02G161900 , TraesCS6B02G338000 , TraesCS1D02G336200 , TraesCS7B02G096200 , TraesCS7D02G192400 , TraesCS3A02G154600 , TraesCS6D02G288300 , TraesCS1A02G333600 , TraesCS1B02G347000 , TraesCS7A02G191400 , TraesCS3B02G180900 , TraesCS6A02G309000 , TraesCS6A02G309000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G162000 carboxyl-terminal peptidase, putative, expressed -
2 Sobic.010G202100 expressed protein -
3 Sobic.006G176400 ATROPGEF7/ROPGEF7, putative, expressed -
4 Sobic.007G019600 expressed protein -
5 Sobic.003G047200 expressed protein -
6 Sobic.009G257900 expressed protein -
7 Sobic.002G202500 spotted leaf 11, putative, expressed -
8 Sobic.003G373900 universal stress protein domain containing protein, putative, expressed -
9 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
10 Sobic.003G282600 glycosyl transferase 8 domain containing protein, putative, expressed -
11 Sobic.006G155900 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
12 Sobic.009G070500 uncharacterized protein At4g06744 precursor, putative, expressed -
13 Sobic.009G025400 myosin heavy chain-related, putative, expressed -
14 Sobic.005G056800 FHA domain containing protein, putative, expressed -
15 Sobic.002G430700 glycosyltransferase family 43 protein, putative, expressed -
16 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
17 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
18 Sobic.006G201300 expressed protein -
19 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
20 Sobic.007G000500 HMG1/2, putative, expressed -


Gene co-expression network
sample Sobic009G195600 Sobic009G195600 Sobic007G162000 Sobic007G162000 Sobic009G195600--Sobic007G162000 Sobic010G202100 Sobic010G202100 Sobic009G195600--Sobic010G202100 Sobic006G176400 Sobic006G176400 Sobic009G195600--Sobic006G176400 Sobic007G019600 Sobic007G019600 Sobic009G195600--Sobic007G019600 Sobic003G047200 Sobic003G047200 Sobic009G195600--Sobic003G047200 Sobic009G257900 Sobic009G257900 Sobic009G195600--Sobic009G257900 Sobic002G202500 Sobic002G202500 Sobic009G195600--Sobic002G202500 Sobic003G373900 Sobic003G373900 Sobic009G195600--Sobic003G373900 Sobic002G035500 Sobic002G035500 Sobic009G195600--Sobic002G035500 Sobic007G162000--Sobic002G202500 Sobic007G162000--Sobic009G195600 Sobic007G162000--Sobic007G019600 Sobic007G162000--Sobic003G047200 Sobic001G331100 Sobic001G331100 Sobic007G162000--Sobic001G331100 Sobic007G162000--Sobic002G035500 Sobic001G253900 Sobic001G253900 Sobic007G162000--Sobic001G253900 Sobic006G155900 Sobic006G155900 Sobic007G162000--Sobic006G155900 Sobic003G432000 Sobic003G432000 Sobic007G162000--Sobic003G432000 Sobic010G215300 Sobic010G215300 Sobic010G202100--Sobic010G215300 Sobic010G234800 Sobic010G234800 Sobic010G202100--Sobic010G234800 Sobic001G098900 Sobic001G098900 Sobic010G202100--Sobic001G098900 Sobic007G017700 Sobic007G017700 Sobic010G202100--Sobic007G017700 Sobic003G414400 Sobic003G414400 Sobic010G202100--Sobic003G414400 Sobic009G025400 Sobic009G025400 Sobic010G202100--Sobic009G025400 Sobic010G202100--Sobic003G047200 Sobic006G201300 Sobic006G201300 Sobic010G202100--Sobic006G201300 Sobic008G114500 Sobic008G114500 Sobic010G202100--Sobic008G114500 Sobic004G133000 Sobic004G133000 Sobic006G176400--Sobic004G133000 Sobic001G070200 Sobic001G070200 Sobic006G176400--Sobic001G070200 Sobic006G176400--Sobic009G195600 Sobic005G056800 Sobic005G056800 Sobic006G176400--Sobic005G056800 Sobic006G176400--Sobic003G414400 Sobic006G176400--Sobic010G215300 Sobic001G284900 Sobic001G284900 Sobic006G176400--Sobic001G284900 Sobic006G176400--Sobic006G155900 Sobic004G198200 Sobic004G198200 Sobic006G176400--Sobic004G198200 Sobic007G019600--Sobic002G035500 Sobic004G237300 Sobic004G237300 Sobic007G019600--Sobic004G237300 Sobic001G494300 Sobic001G494300 Sobic007G019600--Sobic001G494300 Sobic003G282600 Sobic003G282600 Sobic007G019600--Sobic003G282600 Sobic007G019600--Sobic006G155900 Sobic007G019600--Sobic007G162000 Sobic007G019600--Sobic010G202100 Sobic005G129600 Sobic005G129600 Sobic007G019600--Sobic005G129600 Sobic007G019600--Sobic009G025400 Sobic003G047200--Sobic010G234800 Sobic003G047200--Sobic001G098900 Sobic003G047200--Sobic010G215300 Sobic001G458900 Sobic001G458900 Sobic003G047200--Sobic001G458900 Sobic003G047200--Sobic001G284900 Sobic003G047200--Sobic003G414400 Sobic003G047200--Sobic006G155900 Sobic003G047200--Sobic010G202100 Sobic002G279300 Sobic002G279300 Sobic003G047200--Sobic002G279300 Sobic004G317200 Sobic004G317200 Sobic009G257900--Sobic004G317200 Sobic004G108400 Sobic004G108400 Sobic009G257900--Sobic004G108400 Sobic009G257900--Sobic009G025400 Sobic009G257900--Sobic005G129600 Sobic004G313900 Sobic004G313900 Sobic009G257900--Sobic004G313900 Sobic004G329000 Sobic004G329000 Sobic009G257900--Sobic004G329000 Sobic001G390400 Sobic001G390400 Sobic009G257900--Sobic001G390400 Sobic004G357000 Sobic004G357000 Sobic009G257900--Sobic004G357000 Sobic004G113900 Sobic004G113900 Sobic009G257900--Sobic004G113900 Sobic002G202500--Sobic007G162000 Sobic004G336700 Sobic004G336700 Sobic002G202500--Sobic004G336700 Sobic001G247700 Sobic001G247700 Sobic002G202500--Sobic001G247700 Sobic002G202500--Sobic009G195600 Sobic001G265300 Sobic001G265300 Sobic002G202500--Sobic001G265300 Sobic002G202500--Sobic004G113900 Sobic002G202500--Sobic007G019600 Sobic010G209800 Sobic010G209800 Sobic002G202500--Sobic010G209800 Sobic004G283800 Sobic004G283800 Sobic002G202500--Sobic004G283800 Sobic004G343700 Sobic004G343700 Sobic003G373900--Sobic004G343700 Sobic007G000500 Sobic007G000500 Sobic003G373900--Sobic007G000500 Sobic010G269700 Sobic010G269700 Sobic003G373900--Sobic010G269700 Sobic001G074000 Sobic001G074000 Sobic003G373900--Sobic001G074000 Sobic006G274200 Sobic006G274200 Sobic003G373900--Sobic006G274200 Sobic004G313200 Sobic004G313200 Sobic003G373900--Sobic004G313200 Sobic003G019900 Sobic003G019900 Sobic003G373900--Sobic003G019900 Sobic001G540900 Sobic001G540900 Sobic003G373900--Sobic001G540900 Sobic004G246500 Sobic004G246500 Sobic003G373900--Sobic004G246500 Sobic002G035500--Sobic007G019600 Sobic002G035500--Sobic005G129600 Sobic002G035500--Sobic004G113900 Sobic002G035500--Sobic010G209800 Sobic004G191600 Sobic004G191600 Sobic002G035500--Sobic004G191600 Sobic002G035500--Sobic003G282600 Sobic002G035500--Sobic009G257900 Sobic002G035500--Sobic004G237300 Sobic002G035500--Sobic007G162000
Octagon: transcription factors


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