Gene annotation
Transcriptome id Sobic.010G256000.1
Synonym OTP82, Sb10g029325
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
pentatricopeptide, putative, expressed
UniProt A0A194YLH8
Pfam PF13812 PF14432 PF12854 PF01535 PF13041
Panther DB PTHR24015 PTHR24015:SF842
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G29760 : Tetratricopeptide repeat (TPR)-like superfamily protein
RAP-DB (Rice) LOC_Os02g09800.1 : pentatricopeptide, putative, expressed
MaizeGDB (Corn) Zm00025a018414
Brachypodium KQK17462 , KQK15018 , PNT75556 , PNT75557
Barley HORVU7Hr1G096100.1 , HORVU7Hr1G096110.1 , HORVU7Hr1G096110.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G025100 pentatricopeptide repeat-containing protein, putative, expressed -
2 Sobic.006G069100 pentatricopeptide, putative, expressed -
3 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
4 Sobic.001G122200 zinc finger protein, putative, expressed K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
5 Sobic.008G066900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.009G155400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.002G389200 pentatricopeptide repeat domain containing protein, putative, expressed -
8 Sobic.005G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@vegetative storage protein, putative, expressed -
9 Sobic.002G183300 GTP binding protein, putative, expressed -
10 Sobic.007G038700 zinc finger, C3HC4 type domain containing protein, expressed K11985: TRAIP, TRAF-interacting protein
11 Sobic.003G322200 membrane-associated salt-inducible protein, putative, expressed -
12 Sobic.005G028300 Rf1, mitochondrial precursor, putative, expressed -
13 Sobic.001G372800 nucleolar protein NOP5-1, putative, expressed K14565: nucleolar protein 58
14 Sobic.002G251800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
15 Sobic.010G091500 pentatricopeptide, putative, expressed -
16 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
17 Sobic.010G123700 expressed protein -
18 Sobic.008G163400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
19 Sobic.008G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
20 Sobic.004G217900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G256000 Sobic010G256000 Sobic004G025100 Sobic004G025100 Sobic010G256000--Sobic004G025100 Sobic006G069100 Sobic006G069100 Sobic010G256000--Sobic006G069100 Sobic002G218700 Sobic002G218700 Sobic010G256000--Sobic002G218700 Sobic001G122200 Sobic001G122200 Sobic010G256000--Sobic001G122200 Sobic008G066900 Sobic008G066900 Sobic010G256000--Sobic008G066900 Sobic009G155400 Sobic009G155400 Sobic010G256000--Sobic009G155400 Sobic002G389200 Sobic002G389200 Sobic010G256000--Sobic002G389200 Sobic005G168300 Sobic005G168300 Sobic010G256000--Sobic005G168300 Sobic002G183300 Sobic002G183300 Sobic010G256000--Sobic002G183300 Sobic004G025100--Sobic006G069100 Sobic004G025100--Sobic010G256000 Sobic004G025100--Sobic009G155400 Sobic004G025100--Sobic002G183300 Sobic002G084400 Sobic002G084400 Sobic004G025100--Sobic002G084400 Sobic005G028300 Sobic005G028300 Sobic004G025100--Sobic005G028300 Sobic005G210700 Sobic005G210700 Sobic004G025100--Sobic005G210700 Sobic009G116400 Sobic009G116400 Sobic004G025100--Sobic009G116400 Sobic006G085900 Sobic006G085900 Sobic004G025100--Sobic006G085900 Sobic004G241000 Sobic004G241000 Sobic006G069100--Sobic004G241000 Sobic004G256900 Sobic004G256900 Sobic006G069100--Sobic004G256900 Sobic010G068900 Sobic010G068900 Sobic006G069100--Sobic010G068900 Sobic010G190900 Sobic010G190900 Sobic006G069100--Sobic010G190900 Sobic006G069100--Sobic006G085900 Sobic006G069100--Sobic009G155400 Sobic008G163400 Sobic008G163400 Sobic006G069100--Sobic008G163400 Sobic006G069100--Sobic009G116400 Sobic006G069100--Sobic004G025100 Sobic003G347300 Sobic003G347300 Sobic002G218700--Sobic003G347300 Sobic010G046400 Sobic010G046400 Sobic002G218700--Sobic010G046400 Sobic001G247200 Sobic001G247200 Sobic002G218700--Sobic001G247200 Sobic009G030300 Sobic009G030300 Sobic002G218700--Sobic009G030300 Sobic002G218700--Sobic010G256000 Sobic003G131200 Sobic003G131200 Sobic002G218700--Sobic003G131200 Sobic004G227500 Sobic004G227500 Sobic002G218700--Sobic004G227500 Sobic009G253400 Sobic009G253400 Sobic002G218700--Sobic009G253400 Sobic004G225700 Sobic004G225700 Sobic002G218700--Sobic004G225700 Sobic001G122200--Sobic008G163400 Sobic001G122200--Sobic010G068900 Sobic004G282500 Sobic004G282500 Sobic001G122200--Sobic004G282500 Sobic001G122200--Sobic004G241000 Sobic006G262800 Sobic006G262800 Sobic001G122200--Sobic006G262800 Sobic001G268300 Sobic001G268300 Sobic001G122200--Sobic001G268300 Sobic001G396800 Sobic001G396800 Sobic001G122200--Sobic001G396800 Sobic001G122200--Sobic006G069100 Sobic001G149100 Sobic001G149100 Sobic001G122200--Sobic001G149100 Sobic008G066900--Sobic005G210700 Sobic007G179600 Sobic007G179600 Sobic008G066900--Sobic007G179600 Sobic003G239000 Sobic003G239000 Sobic008G066900--Sobic003G239000 Sobic008G099900 Sobic008G099900 Sobic008G066900--Sobic008G099900 Sobic003G051500 Sobic003G051500 Sobic008G066900--Sobic003G051500 Sobic008G066900--Sobic006G085900 Sobic008G066900--Sobic009G155400 Sobic001G391101 Sobic001G391101 Sobic008G066900--Sobic001G391101 Sobic008G066900--Sobic010G256000 Sobic009G155400--Sobic009G116400 Sobic009G155400--Sobic008G163400 Sobic009G155400--Sobic004G241000 Sobic009G155400--Sobic006G085900 Sobic004G217900 Sobic004G217900 Sobic009G155400--Sobic004G217900 Sobic009G155400--Sobic006G069100 Sobic002G172500 Sobic002G172500 Sobic009G155400--Sobic002G172500 Sobic006G262700 Sobic006G262700 Sobic009G155400--Sobic006G262700 Sobic009G155400--Sobic005G210700 Sobic002G389200--Sobic005G028300 Sobic002G389200--Sobic009G155400 Sobic002G240900 Sobic002G240900 Sobic002G389200--Sobic002G240900 Sobic002G389200--Sobic006G069100 Sobic002G389200--Sobic006G085900 Sobic003G419800 Sobic003G419800 Sobic002G389200--Sobic003G419800 Sobic002G251800 Sobic002G251800 Sobic002G389200--Sobic002G251800 Sobic005G011000 Sobic005G011000 Sobic002G389200--Sobic005G011000 Sobic002G389200--Sobic007G179600 Sobic004G266300 Sobic004G266300 Sobic005G168300--Sobic004G266300 Sobic005G168300--Sobic010G256000 Sobic006G073100 Sobic006G073100 Sobic005G168300--Sobic006G073100 Sobic003G420000 Sobic003G420000 Sobic005G168300--Sobic003G420000 Sobic005G168300--Sobic009G253400 Sobic005G168300--Sobic002G218700 Sobic001G187800 Sobic001G187800 Sobic005G168300--Sobic001G187800 Sobic005G168300--Sobic004G217900 Sobic005G168300--Sobic004G227500 Sobic002G183300--Sobic004G025100 Sobic001G401400 Sobic001G401400 Sobic002G183300--Sobic001G401400 Sobic005G059400 Sobic005G059400 Sobic002G183300--Sobic005G059400 Sobic001G105600 Sobic001G105600 Sobic002G183300--Sobic001G105600 Sobic002G183300--Sobic009G253400 Sobic001G334100 Sobic001G334100 Sobic002G183300--Sobic001G334100 Sobic002G183300--Sobic001G122200 Sobic001G204700 Sobic001G204700 Sobic002G183300--Sobic001G204700 Sobic008G000600 Sobic008G000600 Sobic002G183300--Sobic008G000600
Octagon: transcription factors


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