Gene annotation
Transcriptome id Sobic.002G228100.1
Synonym
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt A0A1B6QCZ0
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF192
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47480 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os09g28280.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a047244 , Zm00025a047293
Brachypodium -
Barley HORVU5Hr1G068140.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G259233 - -
2 Sobic.002G407700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@sex determination protein tasselseed-2, putative, expressed -
3 Sobic.009G079925 - -
4 Sobic.005G215601 - -
5 Sobic.001G354200 O-methyltransferase, putative, expressed -
6 Sobic.003G277500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase, putative, expressed -
7 Sobic.007G032700 - -
8 Sobic.003G175400 ribosomal protein L7Ae, putative, expressed -
9 Sobic.001G129700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
10 Sobic.001G345400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ring-H2 zinc finger protein, putative, expressed -
11 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
12 Sobic.009G232266 - -
13 Sobic.009G236800 DUF1645 domain containing protein, putative, expressed -
14 Sobic.009G038000 expressed protein -
15 Sobic.006G044932 - -
16 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
17 Sobic.004G101000 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.004G245500 expressed protein -
19 Sobic.001G436800 expressed protein -
20 Sobic.004G144500 aspartic proteinase-like protein 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G228100 Sobic002G228100 Sobic010G259233 Sobic010G259233 Sobic002G228100--Sobic010G259233 Sobic002G407700 Sobic002G407700 Sobic002G228100--Sobic002G407700 Sobic009G079925 Sobic009G079925 Sobic002G228100--Sobic009G079925 Sobic005G215601 Sobic005G215601 Sobic002G228100--Sobic005G215601 Sobic001G354200 Sobic001G354200 Sobic002G228100--Sobic001G354200 Sobic003G277500 Sobic003G277500 Sobic002G228100--Sobic003G277500 Sobic007G032700 Sobic007G032700 Sobic002G228100--Sobic007G032700 Sobic003G175400 Sobic003G175400 Sobic002G228100--Sobic003G175400 Sobic001G129700 Sobic001G129700 Sobic002G228100--Sobic001G129700 Sobic002G109800 Sobic002G109800 Sobic010G259233--Sobic002G109800 Sobic004G314200 Sobic004G314200 Sobic010G259233--Sobic004G314200 Sobic007G106050 Sobic007G106050 Sobic010G259233--Sobic007G106050 Sobic010G259233--Sobic009G079925 Sobic006G044932 Sobic006G044932 Sobic002G407700--Sobic006G044932 Sobic002G057600 Sobic002G057600 Sobic002G407700--Sobic002G057600 Sobic001G343900 Sobic001G343900 Sobic002G407700--Sobic001G343900 Sobic002G407700--Sobic003G277500 Sobic004G195000 Sobic004G195000 Sobic002G407700--Sobic004G195000 Sobic009G232266 Sobic009G232266 Sobic002G407700--Sobic009G232266 Sobic003G296300 Sobic003G296300 Sobic002G407700--Sobic003G296300 Sobic001G345400 Sobic001G345400 Sobic002G407700--Sobic001G345400 Sobic005G228000 Sobic005G228000 Sobic002G407700--Sobic005G228000 Sobic008G076300 Sobic008G076300 Sobic009G079925--Sobic008G076300 Sobic009G021900 Sobic009G021900 Sobic009G079925--Sobic009G021900 Sobic006G011900 Sobic006G011900 Sobic009G079925--Sobic006G011900 Sobic002G044800 Sobic002G044800 Sobic009G079925--Sobic002G044800 Sobic005G203100 Sobic005G203100 Sobic009G079925--Sobic005G203100 Sobic003G199101 Sobic003G199101 Sobic009G079925--Sobic003G199101 Sobic003G088500 Sobic003G088500 Sobic009G079925--Sobic003G088500 Sobic007G005700 Sobic007G005700 Sobic009G079925--Sobic007G005700 Sobic001G025101 Sobic001G025101 Sobic009G079925--Sobic001G025101 Sobic010G032000 Sobic010G032000 Sobic005G215601--Sobic010G032000 Sobic004G340200 Sobic004G340200 Sobic005G215601--Sobic004G340200 Sobic009G123400 Sobic009G123400 Sobic005G215601--Sobic009G123400 Sobic010G031100 Sobic010G031100 Sobic005G215601--Sobic010G031100 Sobic005G215601--Sobic001G129700 Sobic004G210700 Sobic004G210700 Sobic005G215601--Sobic004G210700 Sobic005G215601--Sobic001G354200 Sobic007G066900 Sobic007G066900 Sobic005G215601--Sobic007G066900 Sobic006G032700 Sobic006G032700 Sobic005G215601--Sobic006G032700 Sobic001G354200--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G354200--Sobic001G397200 Sobic010G275100 Sobic010G275100 Sobic001G354200--Sobic010G275100 Sobic010G032100 Sobic010G032100 Sobic001G354200--Sobic010G032100 Sobic003G138300 Sobic003G138300 Sobic001G354200--Sobic003G138300 Sobic001G481500 Sobic001G481500 Sobic001G354200--Sobic001G481500 Sobic001G309600 Sobic001G309600 Sobic001G354200--Sobic001G309600 Sobic004G245500 Sobic004G245500 Sobic001G354200--Sobic004G245500 Sobic009G229000 Sobic009G229000 Sobic001G354200--Sobic009G229000 Sobic003G277500--Sobic006G044932 Sobic004G010300 Sobic004G010300 Sobic003G277500--Sobic004G010300 Sobic003G162700 Sobic003G162700 Sobic003G277500--Sobic003G162700 Sobic002G070200 Sobic002G070200 Sobic003G277500--Sobic002G070200 Sobic003G277500--Sobic002G407700 Sobic003G277500--Sobic009G232266 Sobic002G373001 Sobic002G373001 Sobic003G277500--Sobic002G373001 Sobic002G333300 Sobic002G333300 Sobic003G277500--Sobic002G333300 Sobic003G277500--Sobic004G195000 Sobic004G236100 Sobic004G236100 Sobic007G032700--Sobic004G236100 Sobic004G336500 Sobic004G336500 Sobic007G032700--Sobic004G336500 Sobic007G008100 Sobic007G008100 Sobic007G032700--Sobic007G008100 Sobic001G525200 Sobic001G525200 Sobic007G032700--Sobic001G525200 Sobic007G032700--Sobic010G032100 Sobic001G054500 Sobic001G054500 Sobic007G032700--Sobic001G054500 Sobic007G032700--Sobic001G354200 Sobic007G032700--Sobic009G229000 Sobic005G155200 Sobic005G155200 Sobic007G032700--Sobic005G155200 Sobic004G220500 Sobic004G220500 Sobic003G175400--Sobic004G220500 Sobic004G140850 Sobic004G140850 Sobic003G175400--Sobic004G140850 Sobic008G149900 Sobic008G149900 Sobic003G175400--Sobic008G149900 Sobic003G050350 Sobic003G050350 Sobic003G175400--Sobic003G050350 Sobic002G379201 Sobic002G379201 Sobic003G175400--Sobic002G379201 Sobic010G218700 Sobic010G218700 Sobic003G175400--Sobic010G218700 Sobic003G284200 Sobic003G284200 Sobic003G175400--Sobic003G284200 Sobic001G129700--Sobic010G032000 Sobic001G129700--Sobic005G215601 Sobic001G129700--Sobic009G123400 Sobic001G436800 Sobic001G436800 Sobic001G129700--Sobic001G436800 Sobic001G129700--Sobic004G340200 Sobic001G129700--Sobic007G066900 Sobic001G129700--Sobic004G210700 Sobic010G031900 Sobic010G031900 Sobic001G129700--Sobic010G031900 Sobic001G129700--Sobic001G354200
Octagon: transcription factors


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