Gene annotation
Transcriptome id Sobic.003G175400.1
Synonym Sb03g022140
Functional annotation ribosomal protein L7Ae, putative, expressed
UniProt C5XM40
Pfam -
Panther DB PTHR23105 PTHR23105:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47610 : Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
RAP-DB (Rice) LOC_Os08g23710.1 : ribosomal protein L7Ae, putative, expressed
MaizeGDB (Corn) Zm00025a005285
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
2 Sobic.004G140850 - -
3 Sobic.004G140850 - -
4 Sobic.004G140850 - -
5 Sobic.008G149900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G050350 - -
7 Sobic.002G379201 - -
8 Sobic.010G218700 OsFBL18 - F-box domain and LRR containing protein, expressed -
9 Sobic.003G284200 expressed protein -
10 Sobic.002G315900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
11 Sobic.007G067608 - -
12 Sobic.007G066900 Cupin domain containing protein, expressed -
13 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
14 Sobic.004G210700 ATOZI1, putative, expressed -
15 Sobic.010G075500 expressed protein -
16 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
17 Sobic.001G101000 OsDegp14 - Putative Deg protease homologue, expressed -
18 Sobic.005G215601 - -
19 Sobic.001G237400 heavy-metal-associated domain-containing protein, putative, expressed -
20 Sobic.009G236800 DUF1645 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G175400 Sobic003G175400 Sobic004G220500 Sobic004G220500 Sobic003G175400--Sobic004G220500 Sobic004G140850 Sobic004G140850 Sobic003G175400--Sobic004G140850 Sobic008G149900 Sobic008G149900 Sobic003G175400--Sobic008G149900 Sobic003G050350 Sobic003G050350 Sobic003G175400--Sobic003G050350 Sobic002G379201 Sobic002G379201 Sobic003G175400--Sobic002G379201 Sobic010G218700 Sobic010G218700 Sobic003G175400--Sobic010G218700 Sobic003G284200 Sobic003G284200 Sobic003G175400--Sobic003G284200 Sobic004G220500--Sobic004G140850 Sobic007G067608 Sobic007G067608 Sobic004G220500--Sobic007G067608 Sobic004G220500--Sobic008G149900 Sobic004G220500--Sobic002G379201 Sobic007G066900 Sobic007G066900 Sobic004G220500--Sobic007G066900 Sobic007G066500 Sobic007G066500 Sobic004G220500--Sobic007G066500 Sobic001G237400 Sobic001G237400 Sobic004G220500--Sobic001G237400 Sobic004G140850--Sobic004G140850 Sobic004G140850--Sobic007G066900 Sobic004G140850--Sobic002G379201 Sobic004G340200 Sobic004G340200 Sobic004G140850--Sobic004G340200 Sobic002G315900 Sobic002G315900 Sobic004G140850--Sobic002G315900 Sobic004G140850--Sobic007G067608 Sobic004G210700 Sobic004G210700 Sobic004G140850--Sobic004G210700 Sobic004G140850--Sobic008G149900 Sobic008G149900--Sobic004G340200 Sobic008G149900--Sobic004G140850 Sobic005G215601 Sobic005G215601 Sobic008G149900--Sobic005G215601 Sobic008G149900--Sobic004G210700 Sobic008G149900--Sobic007G066900 Sobic010G032000 Sobic010G032000 Sobic008G149900--Sobic010G032000 Sobic009G123400 Sobic009G123400 Sobic008G149900--Sobic009G123400 Sobic002G093600 Sobic002G093600 Sobic003G050350--Sobic002G093600 Sobic001G261750 Sobic001G261750 Sobic003G050350--Sobic001G261750 Sobic008G028533 Sobic008G028533 Sobic003G050350--Sobic008G028533 Sobic002G224300 Sobic002G224300 Sobic003G050350--Sobic002G224300 Sobic002G391700 Sobic002G391700 Sobic003G050350--Sobic002G391700 Sobic002G379201--Sobic001G237400 Sobic002G379201--Sobic004G140850 Sobic002G379201--Sobic007G067608 Sobic002G379201--Sobic007G066900 Sobic002G379201--Sobic004G340200 Sobic002G379201--Sobic002G315900 Sobic002G379201--Sobic004G210700 Sobic008G145200 Sobic008G145200 Sobic010G218700--Sobic008G145200 Sobic010G218700--Sobic003G050350 Sobic006G007300 Sobic006G007300 Sobic010G218700--Sobic006G007300 Sobic006G078500 Sobic006G078500 Sobic010G218700--Sobic006G078500 Sobic001G432500 Sobic001G432500 Sobic010G218700--Sobic001G432500 Sobic004G096100 Sobic004G096100 Sobic010G218700--Sobic004G096100 Sobic010G218700--Sobic002G093600 Sobic008G077800 Sobic008G077800 Sobic010G218700--Sobic008G077800 Sobic006G152500 Sobic006G152500 Sobic010G218700--Sobic006G152500 Sobic006G230600 Sobic006G230600 Sobic003G284200--Sobic006G230600 Sobic001G076100 Sobic001G076100 Sobic003G284200--Sobic001G076100 Sobic001G077600 Sobic001G077600 Sobic003G284200--Sobic001G077600 Sobic004G088300 Sobic004G088300 Sobic003G284200--Sobic004G088300 Sobic001G201200 Sobic001G201200 Sobic003G284200--Sobic001G201200 Sobic004G109800 Sobic004G109800 Sobic003G284200--Sobic004G109800 Sobic001G443800 Sobic001G443800 Sobic003G284200--Sobic001G443800 Sobic002G389000 Sobic002G389000 Sobic003G284200--Sobic002G389000 Sobic001G371800 Sobic001G371800 Sobic003G284200--Sobic001G371800
Octagon: transcription factors


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