Gene annotation
Transcriptome id Sobic.001G101000.1
Synonym
Functional annotation OsDegp14 - Putative Deg protease homologue, expressed
UniProt C5WLW4
Pfam PF13365
Panther DB PTHR18868:SF15 PTHR18868
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g04750.1 : OsDegp14 - Putative Deg protease homologue, expressed
MaizeGDB (Corn) -
Brachypodium PNT69925 , PNT69926 , PNT69927 , PNT69928 , PNT69929 , KQK02698 , KQK02696 , KQK02697 , KQK02695 , PNT69932 , PNT69931 , PNT69930
Barley -
Wheat TraesCS4B02G338300 , TraesCS3D02G069500 , TraesCS3B02G084700 , TraesCS3B02G084700 , TraesCS3D02G069700 , TraesCS3D02G069700 , TraesCS4D02G334900 , TraesCS3A02G070500 , TraesCS3A02G070400 , TraesCS3B02G084500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G175400 ribosomal protein L7Ae, putative, expressed -
2 Sobic.004G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
3 Sobic.004G140850 - -
4 Sobic.004G140850 - -
5 Sobic.004G140850 - -
6 Sobic.010G075500 expressed protein -
7 Sobic.008G149900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.007G067608 - -
9 Sobic.007G066900 Cupin domain containing protein, expressed -
10 Sobic.007G066500 Cupin domain containing protein, expressed -
11 Sobic.002G315900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
12 Sobic.009G236800 DUF1645 domain containing protein, putative, expressed -
13 Sobic.010G218700 OsFBL18 - F-box domain and LRR containing protein, expressed -
14 Sobic.009G170600 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
15 Sobic.004G053000 rhodanese-like domain containing protein, putative, expressed K01011: TST, MPST, thiosulfate/3-mercaptopyruvate sulfurtransferase
16 Sobic.004G280401 - -
17 Sobic.002G379201 - -
18 Sobic.003G258500 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
19 Sobic.004G110400 RING-H2 finger protein, putative, expressed -
20 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase


Gene co-expression network
sample Sobic001G101000 Sobic001G101000 Sobic003G175400 Sobic003G175400 Sobic001G101000--Sobic003G175400 Sobic004G220500 Sobic004G220500 Sobic001G101000--Sobic004G220500 Sobic004G140850 Sobic004G140850 Sobic001G101000--Sobic004G140850 Sobic010G075500 Sobic010G075500 Sobic001G101000--Sobic010G075500 Sobic008G149900 Sobic008G149900 Sobic001G101000--Sobic008G149900 Sobic007G067608 Sobic007G067608 Sobic001G101000--Sobic007G067608 Sobic007G066900 Sobic007G066900 Sobic001G101000--Sobic007G066900 Sobic003G175400--Sobic004G220500 Sobic003G175400--Sobic004G140850 Sobic003G175400--Sobic008G149900 Sobic003G050350 Sobic003G050350 Sobic003G175400--Sobic003G050350 Sobic002G379201 Sobic002G379201 Sobic003G175400--Sobic002G379201 Sobic010G218700 Sobic010G218700 Sobic003G175400--Sobic010G218700 Sobic003G284200 Sobic003G284200 Sobic003G175400--Sobic003G284200 Sobic004G220500--Sobic004G140850 Sobic004G220500--Sobic007G067608 Sobic004G220500--Sobic008G149900 Sobic004G220500--Sobic002G379201 Sobic004G220500--Sobic007G066900 Sobic007G066500 Sobic007G066500 Sobic004G220500--Sobic007G066500 Sobic001G237400 Sobic001G237400 Sobic004G220500--Sobic001G237400 Sobic004G140850--Sobic004G140850 Sobic004G140850--Sobic007G066900 Sobic004G140850--Sobic002G379201 Sobic004G340200 Sobic004G340200 Sobic004G140850--Sobic004G340200 Sobic002G315900 Sobic002G315900 Sobic004G140850--Sobic002G315900 Sobic004G140850--Sobic007G067608 Sobic004G210700 Sobic004G210700 Sobic004G140850--Sobic004G210700 Sobic004G140850--Sobic008G149900 Sobic010G075500--Sobic001G237400 Sobic010G075500--Sobic002G379201 Sobic010G075500--Sobic007G067608 Sobic010G075500--Sobic007G066500 Sobic010G075500--Sobic004G140850 Sobic010G259266 Sobic010G259266 Sobic010G075500--Sobic010G259266 Sobic010G075500--Sobic002G315900 Sobic008G149900--Sobic004G340200 Sobic008G149900--Sobic004G140850 Sobic005G215601 Sobic005G215601 Sobic008G149900--Sobic005G215601 Sobic008G149900--Sobic004G210700 Sobic008G149900--Sobic007G066900 Sobic010G032000 Sobic010G032000 Sobic008G149900--Sobic010G032000 Sobic009G123400 Sobic009G123400 Sobic008G149900--Sobic009G123400 Sobic007G067608--Sobic007G066500 Sobic007G067608--Sobic001G237400 Sobic007G067608--Sobic007G066900 Sobic007G066600 Sobic007G066600 Sobic007G067608--Sobic007G066600 Sobic007G067608--Sobic004G140850 Sobic007G067608--Sobic004G210700 Sobic007G066800 Sobic007G066800 Sobic007G067608--Sobic007G066800 Sobic007G066900--Sobic007G067608 Sobic007G066900--Sobic010G032000 Sobic007G066900--Sobic004G210700 Sobic007G066900--Sobic004G340200 Sobic007G066900--Sobic004G140850 Sobic007G066900--Sobic009G123400 Sobic007G066900--Sobic007G066500
Octagon: transcription factors


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