Gene annotation
Transcriptome id Sobic.007G066500.1
Synonym Sb07g005260
Functional annotation Cupin domain containing protein, expressed
UniProt C5YI15
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G39110 : RmlC-like cupins superfamily protein
RAP-DB (Rice) LOC_Os12g05860.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029969 , Zm00025a054791 , Zm00025a029970 , Zm00025a029971 , Zm00025a029973 , Zm00025a029974 , Zm00025a029975
Brachypodium KQJ95106
Barley -
Wheat TraesCS4B02G378000 , TraesCS4B02G378300 , TraesCS4B02G378300 , TraesCSU02G128600 , TraesCSU02G151900 , TraesCS3D02G011000 , TraesCS5A02G545200 , TraesCSU02G128000 , TraesCS4B02G377900 , TraesCS4B02G377900 , TraesCSU02G128500 , TraesCSU02G128800 , TraesCSU02G127900 , TraesCS3A02G012400 , TraesCSU02G152000 , TraesCS4B02G378400 , TraesCS4B02G378100 , TraesCSU02G128400 , TraesCSU02G128200 , TraesCSU02G172100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G066600 Cupin domain containing protein, expressed -
2 Sobic.007G067608 - -
3 Sobic.007G066800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
4 Sobic.001G237400 heavy-metal-associated domain-containing protein, putative, expressed -
5 Sobic.007G066900 Cupin domain containing protein, expressed -
6 Sobic.007G066824 - -
7 Sobic.004G210700 ATOZI1, putative, expressed -
8 Sobic.004G140850 - -
9 Sobic.004G140850 - -
10 Sobic.004G140850 - -
11 Sobic.002G379201 - -
12 Sobic.004G220500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
13 Sobic.009G071300 HAD superfamily phosphatase, putative, expressed -
14 Sobic.008G149900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G340200 dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
16 Sobic.002G315900 autophagy-related protein, putative, expressed K08341: GABARAP, ATG8, GABA(A) receptor-associated protein
17 Sobic.005G224300 O-methyltransferase, putative, expressed -
18 Sobic.010G075500 expressed protein -
19 Sobic.010G032000 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
20 Sobic.009G123400 - -


Gene co-expression network
sample Sobic007G066500 Sobic007G066500 Sobic007G066600 Sobic007G066600 Sobic007G066500--Sobic007G066600 Sobic007G067608 Sobic007G067608 Sobic007G066500--Sobic007G067608 Sobic007G066800 Sobic007G066800 Sobic007G066500--Sobic007G066800 Sobic001G237400 Sobic001G237400 Sobic007G066500--Sobic001G237400 Sobic007G066900 Sobic007G066900 Sobic007G066500--Sobic007G066900 Sobic007G066824 Sobic007G066824 Sobic007G066500--Sobic007G066824 Sobic004G210700 Sobic004G210700 Sobic007G066500--Sobic004G210700 Sobic004G140850 Sobic004G140850 Sobic007G066500--Sobic004G140850 Sobic007G066600--Sobic007G066800 Sobic007G066600--Sobic007G066500 Sobic007G066600--Sobic007G066824 Sobic007G066600--Sobic007G067608 Sobic007G066600--Sobic001G237400 Sobic007G066600--Sobic007G066900 Sobic007G066600--Sobic004G210700 Sobic005G224300 Sobic005G224300 Sobic007G066600--Sobic005G224300 Sobic009G071300 Sobic009G071300 Sobic007G066600--Sobic009G071300 Sobic007G067608--Sobic007G066500 Sobic007G067608--Sobic001G237400 Sobic007G067608--Sobic007G066900 Sobic007G067608--Sobic007G066600 Sobic007G067608--Sobic004G140850 Sobic007G067608--Sobic004G210700 Sobic007G067608--Sobic007G066800 Sobic007G066800--Sobic007G066600 Sobic007G066800--Sobic007G066500 Sobic007G066800--Sobic007G066824 Sobic007G066800--Sobic007G067608 Sobic007G066800--Sobic001G237400 Sobic007G066800--Sobic007G066900 Sobic007G066800--Sobic009G071300 Sobic007G066800--Sobic005G224300 Sobic007G066800--Sobic004G210700 Sobic001G237400--Sobic007G067608 Sobic002G379201 Sobic002G379201 Sobic001G237400--Sobic002G379201 Sobic001G237400--Sobic007G066500 Sobic001G237400--Sobic007G066800 Sobic001G237400--Sobic007G066900 Sobic001G237400--Sobic007G066600 Sobic001G237400--Sobic004G210700 Sobic001G237400--Sobic004G140850 Sobic007G066900--Sobic007G067608 Sobic010G032000 Sobic010G032000 Sobic007G066900--Sobic010G032000 Sobic007G066900--Sobic004G210700 Sobic004G340200 Sobic004G340200 Sobic007G066900--Sobic004G340200 Sobic007G066900--Sobic004G140850 Sobic009G123400 Sobic009G123400 Sobic007G066900--Sobic009G123400 Sobic007G066900--Sobic007G066500 Sobic007G066824--Sobic007G066800 Sobic007G066824--Sobic007G066600 Sobic007G066824--Sobic007G066500 Sobic007G066508 Sobic007G066508 Sobic007G066824--Sobic007G066508 Sobic007G066824--Sobic009G071300 Sobic007G066824--Sobic005G224300 Sobic002G337100 Sobic002G337100 Sobic007G066824--Sobic002G337100 Sobic007G066824--Sobic007G067608 Sobic007G066824--Sobic001G237400 Sobic004G210700--Sobic004G340200 Sobic004G210700--Sobic007G066900 Sobic004G210700--Sobic009G123400 Sobic004G210700--Sobic007G067608 Sobic010G031100 Sobic010G031100 Sobic004G210700--Sobic010G031100 Sobic004G210700--Sobic010G032000 Sobic005G215601 Sobic005G215601 Sobic004G210700--Sobic005G215601 Sobic004G210700--Sobic004G140850 Sobic004G140850--Sobic004G140850 Sobic004G140850--Sobic007G066900 Sobic004G140850--Sobic002G379201 Sobic004G140850--Sobic004G340200 Sobic002G315900 Sobic002G315900 Sobic004G140850--Sobic002G315900 Sobic004G140850--Sobic007G067608 Sobic004G140850--Sobic004G210700 Sobic008G149900 Sobic008G149900 Sobic004G140850--Sobic008G149900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.