Gene annotation
Transcriptome id Sobic.004G067500.3
Synonym SNI1, Sb04g005660
Functional annotation SNI1, putative, expressed
UniProt A0A1Z5RL81
Pfam -
Panther DB PTHR37243
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G18470 : negative regulator of systemic acquired resistance (SNI1)
RAP-DB (Rice) LOC_Os02g20870.1 : SNI1, putative, expressed
MaizeGDB (Corn) Zm00025a034750
Brachypodium KQJ94609 , KQJ94608
Barley -
Wheat TraesCS6B02G243400 , TraesCS6D02G196000 , TraesCS6A02G213300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G343800 - -
2 Sobic.010G276800 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
3 Sobic.006G114000 transmembrane anterior posterior transformation 1, putative, expressed -
4 Sobic.002G300400 serine/threonine-protein kinase CTR1, putative, expressed -
5 Sobic.006G124900 MA3 domain containing protein, expressed -
6 Sobic.008G024600 expressed protein -
7 Sobic.005G177800 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.003G019100 KIN, antigenic determinant of recA protein, putative, expressed K13102: DNA/RNA-binding protein KIN17
9 Sobic.010G248800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@reticulon domain containing protein, putative, expressed -
10 Sobic.007G079200 exonuclease, putative, expressed -
11 Sobic.003G145900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@acyltransferase, putative, expressed K13510: lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase
12 Sobic.008G042600 N-acetylglucosaminyltransferase I, putative, expressed K00726: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
13 Sobic.010G001600 homogentisate 1,2-dioxygenase, putative, expressed K00451: HGD, homogentisate 1,2-dioxygenase
14 Sobic.001G490000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CSLA4 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
15 Sobic.001G477800 expressed protein -
16 Sobic.008G160700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial precursor, putative, expressed K01968: 3-methylcrotonyl-CoA carboxylase alpha subunit
17 Sobic.001G498200 YT521-B-like family domain containing protein, expressed -
18 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
19 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
20 Sobic.006G240000 - -


Gene co-expression network
sample Sobic004G067500 Sobic004G067500 Sobic002G343800 Sobic002G343800 Sobic004G067500--Sobic002G343800 Sobic010G276800 Sobic010G276800 Sobic004G067500--Sobic010G276800 Sobic006G114000 Sobic006G114000 Sobic004G067500--Sobic006G114000 Sobic002G300400 Sobic002G300400 Sobic004G067500--Sobic002G300400 Sobic006G124900 Sobic006G124900 Sobic004G067500--Sobic006G124900 Sobic008G024600 Sobic008G024600 Sobic004G067500--Sobic008G024600 Sobic005G177800 Sobic005G177800 Sobic004G067500--Sobic005G177800 Sobic003G019100 Sobic003G019100 Sobic004G067500--Sobic003G019100 Sobic010G248800 Sobic010G248800 Sobic004G067500--Sobic010G248800 Sobic002G343800--Sobic008G024600 Sobic006G128900 Sobic006G128900 Sobic002G343800--Sobic006G128900 Sobic002G343800--Sobic005G177800 Sobic001G543800 Sobic001G543800 Sobic002G343800--Sobic001G543800 Sobic010G001600 Sobic010G001600 Sobic002G343800--Sobic010G001600 Sobic006G159900 Sobic006G159900 Sobic002G343800--Sobic006G159900 Sobic009G135800 Sobic009G135800 Sobic002G343800--Sobic009G135800 Sobic006G209850 Sobic006G209850 Sobic002G343800--Sobic006G209850 Sobic009G040700 Sobic009G040700 Sobic002G343800--Sobic009G040700 Sobic010G276800--Sobic006G124900 Sobic010G276800--Sobic008G024600 Sobic010G276800--Sobic010G001600 Sobic008G042600 Sobic008G042600 Sobic010G276800--Sobic008G042600 Sobic010G276800--Sobic001G543800 Sobic010G276800--Sobic009G040700 Sobic003G008500 Sobic003G008500 Sobic010G276800--Sobic003G008500 Sobic004G256600 Sobic004G256600 Sobic010G276800--Sobic004G256600 Sobic010G276800--Sobic005G177800 Sobic005G061601 Sobic005G061601 Sobic006G114000--Sobic005G061601 Sobic008G026100 Sobic008G026100 Sobic006G114000--Sobic008G026100 Sobic006G240000 Sobic006G240000 Sobic006G114000--Sobic006G240000 Sobic004G092300 Sobic004G092300 Sobic006G114000--Sobic004G092300 Sobic003G216100 Sobic003G216100 Sobic006G114000--Sobic003G216100 Sobic007G168800 Sobic007G168800 Sobic006G114000--Sobic007G168800 Sobic005G110427 Sobic005G110427 Sobic006G114000--Sobic005G110427 Sobic005G067900 Sobic005G067900 Sobic006G114000--Sobic005G067900 Sobic005G154850 Sobic005G154850 Sobic006G114000--Sobic005G154850 Sobic002G300400--Sobic010G001600 Sobic002G300400--Sobic006G124900 Sobic002G300400--Sobic001G543800 Sobic010G264100 Sobic010G264100 Sobic002G300400--Sobic010G264100 Sobic008G160700 Sobic008G160700 Sobic002G300400--Sobic008G160700 Sobic002G165300 Sobic002G165300 Sobic002G300400--Sobic002G165300 Sobic002G300400--Sobic005G177800 Sobic007G130600 Sobic007G130600 Sobic002G300400--Sobic007G130600 Sobic001G194900 Sobic001G194900 Sobic002G300400--Sobic001G194900 Sobic006G124900--Sobic005G177800 Sobic006G124900--Sobic010G001600 Sobic004G196700 Sobic004G196700 Sobic006G124900--Sobic004G196700 Sobic006G124900--Sobic001G543800 Sobic006G124900--Sobic010G276800 Sobic002G313300 Sobic002G313300 Sobic006G124900--Sobic002G313300 Sobic001G477800 Sobic001G477800 Sobic006G124900--Sobic001G477800 Sobic006G124900--Sobic007G130600 Sobic006G124900--Sobic002G300400 Sobic008G024600--Sobic006G209850 Sobic002G053000 Sobic002G053000 Sobic008G024600--Sobic002G053000 Sobic008G024600--Sobic006G128900 Sobic008G024600--Sobic009G040700 Sobic010G129200 Sobic010G129200 Sobic008G024600--Sobic010G129200 Sobic002G158700 Sobic002G158700 Sobic008G024600--Sobic002G158700 Sobic008G024600--Sobic002G343800 Sobic003G280800 Sobic003G280800 Sobic008G024600--Sobic003G280800 Sobic005G045300 Sobic005G045300 Sobic008G024600--Sobic005G045300 Sobic005G177800--Sobic006G124900 Sobic005G177800--Sobic004G196700 Sobic005G177800--Sobic010G001600 Sobic005G177800--Sobic001G543800 Sobic004G031700 Sobic004G031700 Sobic005G177800--Sobic004G031700 Sobic005G177800--Sobic001G477800 Sobic007G078000 Sobic007G078000 Sobic005G177800--Sobic007G078000 Sobic005G177800--Sobic002G313300 Sobic009G000500 Sobic009G000500 Sobic005G177800--Sobic009G000500 Sobic009G121100 Sobic009G121100 Sobic003G019100--Sobic009G121100 Sobic001G373200 Sobic001G373200 Sobic003G019100--Sobic001G373200 Sobic003G407300 Sobic003G407300 Sobic003G019100--Sobic003G407300 Sobic004G295800 Sobic004G295800 Sobic003G019100--Sobic004G295800 Sobic004G021100 Sobic004G021100 Sobic003G019100--Sobic004G021100 Sobic006G214500 Sobic006G214500 Sobic003G019100--Sobic006G214500 Sobic009G249200 Sobic009G249200 Sobic003G019100--Sobic009G249200 Sobic001G290000 Sobic001G290000 Sobic003G019100--Sobic001G290000 Sobic001G409600 Sobic001G409600 Sobic003G019100--Sobic001G409600 Sobic001G156100 Sobic001G156100 Sobic010G248800--Sobic001G156100 Sobic001G447500 Sobic001G447500 Sobic010G248800--Sobic001G447500 Sobic010G248800--Sobic003G407300 Sobic010G248800--Sobic001G373200 Sobic010G248800--Sobic003G019100 Sobic006G058600 Sobic006G058600 Sobic010G248800--Sobic006G058600 Sobic001G322700 Sobic001G322700 Sobic010G248800--Sobic001G322700 Sobic002G304000 Sobic002G304000 Sobic010G248800--Sobic002G304000 Sobic003G329400 Sobic003G329400 Sobic010G248800--Sobic003G329400
Octagon: transcription factors


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