Gene annotation
Transcriptome id Sobic.010G135900.1
Synonym
Functional annotation -
UniProt A0A194YIY2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G176501 - -
2 Sobic.003G174400 - -
3 Sobic.004G321800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@saccharopine dehydrogenase, putative, expressed K14157: alpha-aminoadipic semialdehyde synthase
4 Sobic.002G190500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@alpha-amylase precursor, putative, expressed K01176: AMY, amyA, alpha-amylase
5 Sobic.007G092900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.004G320600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyltransferase, putative, expressed -
7 Sobic.003G138200 expressed protein -
8 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.007G093000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.001G150200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK53b - OsWAK receptor-like protein kinase, expressed -
11 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.001G325200 Expressed in drought and oxidative stress(PubMedID : 29862293)@aldehyde oxidase, putative, expressed K00106: xanthine dehydrogenase/oxidase
13 Sobic.009G006400 auxin-induced protein 5NG4, putative, expressed -
14 Sobic.002G324000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@isocitrate lyase, putative, expressed K01637: E4.1.3.1, isocitrate lyase
15 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
16 Sobic.003G184900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@esterase, putative, expressed -
17 Sobic.006G226400 leucoanthocyanidin reductase, putative, expressed -
18 Sobic.001G474500 mitochondrial carrier protein, putative, expressed -
19 Sobic.004G060900 STRUBBELIG-RECEPTOR FAMILY 3 precursor, putative, expressed -
20 Sobic.003G105800 No apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic010G135900 Sobic010G135900 Sobic001G176501 Sobic001G176501 Sobic010G135900--Sobic001G176501 Sobic003G174400 Sobic003G174400 Sobic010G135900--Sobic003G174400 Sobic004G321800 Sobic004G321800 Sobic010G135900--Sobic004G321800 Sobic002G190500 Sobic002G190500 Sobic010G135900--Sobic002G190500 Sobic007G092900 Sobic007G092900 Sobic010G135900--Sobic007G092900 Sobic004G320600 Sobic004G320600 Sobic010G135900--Sobic004G320600 Sobic003G138200 Sobic003G138200 Sobic010G135900--Sobic003G138200 Sobic007G187300 Sobic007G187300 Sobic010G135900--Sobic007G187300 Sobic007G093000 Sobic007G093000 Sobic010G135900--Sobic007G093000 Sobic001G176501--Sobic003G174400 Sobic002G249300 Sobic002G249300 Sobic001G176501--Sobic002G249300 Sobic001G176501--Sobic010G135900 Sobic001G496100 Sobic001G496100 Sobic001G176501--Sobic001G496100 Sobic003G174301 Sobic003G174301 Sobic001G176501--Sobic003G174301 Sobic004G034600 Sobic004G034600 Sobic001G176501--Sobic004G034600 Sobic009G006400 Sobic009G006400 Sobic001G176501--Sobic009G006400 Sobic001G000501 Sobic001G000501 Sobic001G176501--Sobic001G000501 Sobic005G149700 Sobic005G149700 Sobic001G176501--Sobic005G149700 Sobic003G174400--Sobic001G176501 Sobic003G174400--Sobic002G249300 Sobic001G459600 Sobic001G459600 Sobic003G174400--Sobic001G459600 Sobic003G174400--Sobic004G034600 Sobic003G174400--Sobic005G149700 Sobic003G174400--Sobic010G135900 Sobic003G174400--Sobic001G000501 Sobic003G174400--Sobic003G174301 Sobic003G174400--Sobic001G496100 Sobic006G100332 Sobic006G100332 Sobic004G321800--Sobic006G100332 Sobic003G087200 Sobic003G087200 Sobic004G321800--Sobic003G087200 Sobic003G148800 Sobic003G148800 Sobic004G321800--Sobic003G148800 Sobic009G226300 Sobic009G226300 Sobic004G321800--Sobic009G226300 Sobic001G325200 Sobic001G325200 Sobic004G321800--Sobic001G325200 Sobic003G105800 Sobic003G105800 Sobic004G321800--Sobic003G105800 Sobic003G184900 Sobic003G184900 Sobic004G321800--Sobic003G184900 Sobic001G150600 Sobic001G150600 Sobic004G321800--Sobic001G150600 Sobic004G321800--Sobic004G320600 Sobic002G324000 Sobic002G324000 Sobic002G190500--Sobic002G324000 Sobic004G113300 Sobic004G113300 Sobic002G190500--Sobic004G113300 Sobic005G130400 Sobic005G130400 Sobic002G190500--Sobic005G130400 Sobic004G050200 Sobic004G050200 Sobic002G190500--Sobic004G050200 Sobic002G190500--Sobic003G184900 Sobic004G345800 Sobic004G345800 Sobic002G190500--Sobic004G345800 Sobic002G190500--Sobic004G321800 Sobic007G216201 Sobic007G216201 Sobic002G190500--Sobic007G216201 Sobic008G079300 Sobic008G079300 Sobic002G190500--Sobic008G079300 Sobic007G092900--Sobic007G093000 Sobic007G092900--Sobic009G226300 Sobic001G249300 Sobic001G249300 Sobic007G092900--Sobic001G249300 Sobic006G030700 Sobic006G030700 Sobic007G092900--Sobic006G030700 Sobic009G054500 Sobic009G054500 Sobic007G092900--Sobic009G054500 Sobic007G092900--Sobic007G187300 Sobic007G092900--Sobic001G150600 Sobic007G092900--Sobic004G320600 Sobic007G092900--Sobic006G100332 Sobic006G226400 Sobic006G226400 Sobic004G320600--Sobic006G226400 Sobic004G320600--Sobic004G321800 Sobic004G320600--Sobic003G087200 Sobic004G320600--Sobic007G092900 Sobic004G320600--Sobic006G100332 Sobic004G320600--Sobic007G093000 Sobic004G320600--Sobic007G187300 Sobic004G320600--Sobic009G226300 Sobic005G178100 Sobic005G178100 Sobic004G320600--Sobic005G178100 Sobic003G138200--Sobic001G249300 Sobic003G138200--Sobic009G226300 Sobic003G138200--Sobic007G187300 Sobic001G150200 Sobic001G150200 Sobic003G138200--Sobic001G150200 Sobic003G138200--Sobic009G054500 Sobic009G211400 Sobic009G211400 Sobic003G138200--Sobic009G211400 Sobic002G215700 Sobic002G215700 Sobic003G138200--Sobic002G215700 Sobic004G260000 Sobic004G260000 Sobic003G138200--Sobic004G260000 Sobic003G138200--Sobic001G325200 Sobic007G187300--Sobic009G226300 Sobic007G187300--Sobic006G030700 Sobic007G187300--Sobic001G249300 Sobic007G187300--Sobic009G054500 Sobic007G187300--Sobic003G138200 Sobic007G187300--Sobic006G100332 Sobic001G280200 Sobic001G280200 Sobic007G187300--Sobic001G280200 Sobic005G018500 Sobic005G018500 Sobic007G187300--Sobic005G018500 Sobic007G187300--Sobic004G260000 Sobic007G093000--Sobic007G092900 Sobic007G093000--Sobic001G249300 Sobic007G093000--Sobic006G030700 Sobic007G093000--Sobic009G226300 Sobic007G093000--Sobic007G187300 Sobic007G093000--Sobic009G054500 Sobic003G259200 Sobic003G259200 Sobic007G093000--Sobic003G259200 Sobic007G093000--Sobic001G150600 Sobic007G093000--Sobic004G320600
Octagon: transcription factors


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