Gene annotation
Transcriptome id Sobic.001G176501.1
Synonym -
Functional annotation -
UniProt A0A1Z5S653
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G174400 - -
2 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
3 Sobic.010G135900 - -
4 Sobic.001G496100 - -
5 Sobic.003G174301 - -
6 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
7 Sobic.009G006400 auxin-induced protein 5NG4, putative, expressed -
8 Sobic.001G000501 - -
9 Sobic.005G149700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
10 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
11 Sobic.001G459600 expressed protein -
12 Sobic.001G000700 glutathione S-transferase, N-terminal domain containing protein, expressed K00799: GST, glutathione S-transferase
13 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
14 Sobic.003G322700 expressed protein -
15 Sobic.001G542150 - -
16 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -
17 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
18 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
19 Sobic.003G320700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.006G104600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G176501 Sobic001G176501 Sobic003G174400 Sobic003G174400 Sobic001G176501--Sobic003G174400 Sobic002G249300 Sobic002G249300 Sobic001G176501--Sobic002G249300 Sobic010G135900 Sobic010G135900 Sobic001G176501--Sobic010G135900 Sobic001G496100 Sobic001G496100 Sobic001G176501--Sobic001G496100 Sobic003G174301 Sobic003G174301 Sobic001G176501--Sobic003G174301 Sobic004G034600 Sobic004G034600 Sobic001G176501--Sobic004G034600 Sobic009G006400 Sobic009G006400 Sobic001G176501--Sobic009G006400 Sobic001G000501 Sobic001G000501 Sobic001G176501--Sobic001G000501 Sobic005G149700 Sobic005G149700 Sobic001G176501--Sobic005G149700 Sobic003G174400--Sobic001G176501 Sobic003G174400--Sobic002G249300 Sobic001G459600 Sobic001G459600 Sobic003G174400--Sobic001G459600 Sobic003G174400--Sobic004G034600 Sobic003G174400--Sobic005G149700 Sobic003G174400--Sobic010G135900 Sobic003G174400--Sobic001G000501 Sobic003G174400--Sobic003G174301 Sobic003G174400--Sobic001G496100 Sobic002G249300--Sobic004G034600 Sobic002G249300--Sobic003G174301 Sobic001G223550 Sobic001G223550 Sobic002G249300--Sobic001G223550 Sobic002G249300--Sobic005G149700 Sobic009G011600 Sobic009G011600 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic002G249300--Sobic001G496100 Sobic007G010700 Sobic007G010700 Sobic002G249300--Sobic007G010700 Sobic010G135900--Sobic001G176501 Sobic010G135900--Sobic003G174400 Sobic004G321800 Sobic004G321800 Sobic010G135900--Sobic004G321800 Sobic002G190500 Sobic002G190500 Sobic010G135900--Sobic002G190500 Sobic007G092900 Sobic007G092900 Sobic010G135900--Sobic007G092900 Sobic004G320600 Sobic004G320600 Sobic010G135900--Sobic004G320600 Sobic003G138200 Sobic003G138200 Sobic010G135900--Sobic003G138200 Sobic007G187300 Sobic007G187300 Sobic010G135900--Sobic007G187300 Sobic007G093000 Sobic007G093000 Sobic010G135900--Sobic007G093000 Sobic003G398100 Sobic003G398100 Sobic001G496100--Sobic003G398100 Sobic009G207600 Sobic009G207600 Sobic001G496100--Sobic009G207600 Sobic001G496100--Sobic009G011600 Sobic001G496100--Sobic009G006400 Sobic006G199000 Sobic006G199000 Sobic001G496100--Sobic006G199000 Sobic004G225200 Sobic004G225200 Sobic001G496100--Sobic004G225200 Sobic002G266000 Sobic002G266000 Sobic001G496100--Sobic002G266000 Sobic001G496100--Sobic005G149700 Sobic008G153400 Sobic008G153400 Sobic001G496100--Sobic008G153400 Sobic003G174301--Sobic002G249300 Sobic003G174301--Sobic004G034600 Sobic003G174301--Sobic005G149700 Sobic005G053200 Sobic005G053200 Sobic003G174301--Sobic005G053200 Sobic003G174301--Sobic009G011600 Sobic001G053200 Sobic001G053200 Sobic003G174301--Sobic001G053200 Sobic004G070500 Sobic004G070500 Sobic003G174301--Sobic004G070500 Sobic003G174301--Sobic001G252000 Sobic003G174301--Sobic001G176501 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic004G034600--Sobic009G011600 Sobic004G034600--Sobic002G266000 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic009G006400--Sobic001G496100 Sobic009G006400--Sobic009G207600 Sobic009G006400--Sobic003G322700 Sobic003G010600 Sobic003G010600 Sobic009G006400--Sobic003G010600 Sobic001G474500 Sobic001G474500 Sobic009G006400--Sobic001G474500 Sobic009G006400--Sobic002G266000 Sobic009G006400--Sobic001G176501 Sobic004G266400 Sobic004G266400 Sobic009G006400--Sobic004G266400 Sobic006G087700 Sobic006G087700 Sobic009G006400--Sobic006G087700 Sobic001G000501--Sobic001G459600 Sobic001G000700 Sobic001G000700 Sobic001G000501--Sobic001G000700 Sobic005G089400 Sobic005G089400 Sobic001G000501--Sobic005G089400 Sobic001G000501--Sobic007G010700 Sobic008G084300 Sobic008G084300 Sobic001G000501--Sobic008G084300 Sobic001G000501--Sobic005G149700 Sobic001G000501--Sobic004G034600 Sobic001G000501--Sobic005G053200 Sobic004G253700 Sobic004G253700 Sobic001G000501--Sobic004G253700 Sobic005G149700--Sobic004G034600 Sobic001G504900 Sobic001G504900 Sobic005G149700--Sobic001G504900 Sobic005G149700--Sobic002G266000 Sobic002G128200 Sobic002G128200 Sobic005G149700--Sobic002G128200 Sobic006G104600 Sobic006G104600 Sobic005G149700--Sobic006G104600 Sobic005G149700--Sobic009G011600 Sobic005G149700--Sobic009G207600 Sobic005G149700--Sobic003G174301 Sobic005G149700--Sobic003G398100
Octagon: transcription factors


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