Gene annotation
Transcriptome id Sobic.003G422600.1
Synonym BAT1, Sb03g045550
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
amino acid permease family protein, putative, expressed
UniProt C5XHS5
Pfam PF00324
Panther DB PTHR11785 PTHR11785:SF321
NCBI CDD KOG1289; Amino acid transporters
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0015171amino acid transmembrane transporter activity GO:0003333amino acid transmembrane transport


Orthologs (automatic annotation)
TAIR AT2G01170 : bidirectional amino acid transporter 1
RAP-DB (Rice) LOC_Os01g71740.1 : amino acid permease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a026049 , Zm00025a026047 , Zm00025a038470 , Zm00025a028664
Brachypodium KQK11517 , KQK11518 , KQK03895 , KQK08653 , PNT73590 , PNT72362 , PNT72363 , PNT72361
Barley HORVU3Hr1G053090.18 , HORVU3Hr1G053090.19 , HORVU3Hr1G053090.14 , HORVU3Hr1G053090.15 , HORVU3Hr1G053090.16 , HORVU3Hr1G053090.17 , HORVU3Hr1G053090.10 , HORVU3Hr1G053090.11 , HORVU3Hr1G053090.12 , HORVU3Hr1G053090.13 , HORVU3Hr1G105870.7 , HORVU3Hr1G105870.8 , HORVU3Hr1G105870.9 , HORVU3Hr1G105870.4 , HORVU3Hr1G105870.5 , HORVU3Hr1G105870.6 , HORVU3Hr1G105870.1 , HORVU3Hr1G105870.2 , HORVU3Hr1G105870.3 , HORVU3Hr1G105870.14 , HORVU3Hr1G105870.15 , HORVU3Hr1G105870.12 , HORVU3Hr1G105870.13 , HORVU3Hr1G105870.10 , HORVU3Hr1G105870.11 , HORVU3Hr1G105920.6 , HORVU3Hr1G105920.7 , HORVU3Hr1G105920.4 , HORVU3Hr1G105920.3 , HORVU3Hr1G105920.1 , HORVU3Hr1G105920.8 , HORVU3Hr1G105920.9 , HORVU3Hr1G017330.13 , HORVU3Hr1G017330.12 , HORVU3Hr1G017330.11 , HORVU3Hr1G017330.10 , HORVU3Hr1G053090.4 , HORVU3Hr1G053090.5 , HORVU3Hr1G105920.11 , HORVU3Hr1G017330.9 , HORVU3Hr1G017330.8 , HORVU3Hr1G053090.8 , HORVU3Hr1G053090.1 , HORVU3Hr1G017330.3 , HORVU3Hr1G017330.2 , HORVU3Hr1G017330.1 , HORVU3Hr1G053090.9 , HORVU3Hr1G017330.7 , HORVU3Hr1G017330.6 , HORVU3Hr1G017330.4
Wheat TraesCS3D02G480000 , TraesCS3B02G532100 , TraesCS3A02G484600 , TraesCS3B02G531900 , TraesCS3D02G219100 , TraesCS3D02G219100 , TraesCS3A02G484700 , TraesCS3B02G111600 , TraesCS3A02G484900 , TraesCSU02G049700 , TraesCS3B02G247500 , TraesCS3B02G247500 , TraesCS3B02G531700 , TraesCS3A02G217200 , TraesCS3A02G217200 , TraesCS3D02G096500 , TraesCS3B02G532305 , TraesCS3B02G532300 , TraesCS3D02G479800 , TraesCS3A02G096000 , TraesCS3D02G480100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G009200 SAG20, putative, expressed -
2 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
3 Sobic.001G354400 O-methyltransferase, putative, expressed -
4 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
5 Sobic.002G013400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.002G098200 expressed protein -
7 Sobic.002G023300 SCP-like extracellular protein, expressed K13449: pathogenesis-related protein 1
8 Sobic.001G145700 thaumatin, putative, expressed -
9 Sobic.008G009100 SAG20, putative, expressed -
10 Sobic.010G230900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
11 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
12 Sobic.005G171500 expressed protein -
13 Sobic.002G140600 dynamin family protein, putative, expressed -
14 Sobic.010G160066 - -
15 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.008G015600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@CAMK_CAMK_like.42 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
17 Sobic.006G132500 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
18 Sobic.006G076800 serine/threonine-protein kinase receptor precursor, putative, expressed -
19 Sobic.001G469500 transporter family protein, putative, expressed -
20 Sobic.004G206401 - -


Gene co-expression network
sample Sobic003G422600 Sobic003G422600 Sobic008G009200 Sobic008G009200 Sobic003G422600--Sobic008G009200 Sobic009G012900 Sobic009G012900 Sobic003G422600--Sobic009G012900 Sobic001G354400 Sobic001G354400 Sobic003G422600--Sobic001G354400 Sobic002G024400 Sobic002G024400 Sobic003G422600--Sobic002G024400 Sobic002G013400 Sobic002G013400 Sobic003G422600--Sobic002G013400 Sobic002G098200 Sobic002G098200 Sobic003G422600--Sobic002G098200 Sobic002G023300 Sobic002G023300 Sobic003G422600--Sobic002G023300 Sobic001G145700 Sobic001G145700 Sobic003G422600--Sobic001G145700 Sobic008G009100 Sobic008G009100 Sobic003G422600--Sobic008G009100 Sobic008G009200--Sobic008G009100 Sobic001G469500 Sobic001G469500 Sobic008G009200--Sobic001G469500 Sobic010G044700 Sobic010G044700 Sobic008G009200--Sobic010G044700 Sobic005G171500 Sobic005G171500 Sobic008G009200--Sobic005G171500 Sobic008G009200--Sobic001G354400 Sobic005G217200 Sobic005G217200 Sobic008G009200--Sobic005G217200 Sobic003G244600 Sobic003G244600 Sobic008G009200--Sobic003G244600 Sobic002G035200 Sobic002G035200 Sobic008G009200--Sobic002G035200 Sobic002G122800 Sobic002G122800 Sobic008G009200--Sobic002G122800 Sobic002G058200 Sobic002G058200 Sobic009G012900--Sobic002G058200 Sobic009G029600 Sobic009G029600 Sobic009G012900--Sobic009G029600 Sobic002G011600 Sobic002G011600 Sobic009G012900--Sobic002G011600 Sobic003G216000 Sobic003G216000 Sobic009G012900--Sobic003G216000 Sobic006G030700 Sobic006G030700 Sobic009G012900--Sobic006G030700 Sobic010G170550 Sobic010G170550 Sobic009G012900--Sobic010G170550 Sobic002G215800 Sobic002G215800 Sobic009G012900--Sobic002G215800 Sobic001G351800 Sobic001G351800 Sobic009G012900--Sobic001G351800 Sobic009G012900--Sobic002G098200 Sobic003G203200 Sobic003G203200 Sobic001G354400--Sobic003G203200 Sobic001G354400--Sobic002G122800 Sobic001G316400 Sobic001G316400 Sobic001G354400--Sobic001G316400 Sobic006G181300 Sobic006G181300 Sobic001G354400--Sobic006G181300 Sobic006G246600 Sobic006G246600 Sobic001G354400--Sobic006G246600 Sobic004G226100 Sobic004G226100 Sobic001G354400--Sobic004G226100 Sobic005G169400 Sobic005G169400 Sobic001G354400--Sobic005G169400 Sobic009G114000 Sobic009G114000 Sobic001G354400--Sobic009G114000 Sobic008G048900 Sobic008G048900 Sobic001G354400--Sobic008G048900 Sobic002G024400--Sobic001G145700 Sobic010G230900 Sobic010G230900 Sobic002G024400--Sobic010G230900 Sobic003G031100 Sobic003G031100 Sobic002G024400--Sobic003G031100 Sobic005G126200 Sobic005G126200 Sobic002G024400--Sobic005G126200 Sobic005G169200 Sobic005G169200 Sobic002G024400--Sobic005G169200 Sobic010G230800 Sobic010G230800 Sobic002G024400--Sobic010G230800 Sobic006G076800 Sobic006G076800 Sobic002G024400--Sobic006G076800 Sobic002G024400--Sobic008G009200 Sobic005G131700 Sobic005G131700 Sobic002G024400--Sobic005G131700 Sobic005G137400 Sobic005G137400 Sobic002G013400--Sobic005G137400 Sobic002G013400--Sobic010G230800 Sobic004G304200 Sobic004G304200 Sobic002G013400--Sobic004G304200 Sobic002G013400--Sobic002G098200 Sobic002G013400--Sobic010G230900 Sobic002G013400--Sobic005G169200 Sobic002G013400--Sobic005G126200 Sobic002G013400--Sobic002G011600 Sobic002G013400--Sobic003G216000 Sobic002G098200--Sobic002G058200 Sobic002G098200--Sobic004G304200 Sobic002G098200--Sobic003G216000 Sobic002G098200--Sobic005G137400 Sobic005G043600 Sobic005G043600 Sobic002G098200--Sobic005G043600 Sobic002G098200--Sobic009G012900 Sobic002G100700 Sobic002G100700 Sobic002G098200--Sobic002G100700 Sobic004G169700 Sobic004G169700 Sobic002G098200--Sobic004G169700 Sobic002G098200--Sobic002G011600 Sobic002G023300--Sobic003G244600 Sobic002G023300--Sobic005G169400 Sobic006G132500 Sobic006G132500 Sobic002G023300--Sobic006G132500 Sobic003G111200 Sobic003G111200 Sobic002G023300--Sobic003G111200 Sobic008G079300 Sobic008G079300 Sobic002G023300--Sobic008G079300 Sobic003G184900 Sobic003G184900 Sobic002G023300--Sobic003G184900 Sobic004G320600 Sobic004G320600 Sobic002G023300--Sobic004G320600 Sobic003G388251 Sobic003G388251 Sobic002G023300--Sobic003G388251 Sobic008G182700 Sobic008G182700 Sobic002G023300--Sobic008G182700 Sobic001G145700--Sobic005G169200 Sobic008G182300 Sobic008G182300 Sobic001G145700--Sobic008G182300 Sobic008G182600 Sobic008G182600 Sobic001G145700--Sobic008G182600 Sobic009G181200 Sobic009G181200 Sobic001G145700--Sobic009G181200 Sobic008G182800 Sobic008G182800 Sobic001G145700--Sobic008G182800 Sobic001G145600 Sobic001G145600 Sobic001G145700--Sobic001G145600 Sobic001G145700--Sobic010G230800 Sobic009G073500 Sobic009G073500 Sobic001G145700--Sobic009G073500 Sobic001G145700--Sobic006G076800 Sobic008G009100--Sobic008G009200 Sobic008G009100--Sobic001G469500 Sobic007G011700 Sobic007G011700 Sobic008G009100--Sobic007G011700 Sobic003G263300 Sobic003G263300 Sobic008G009100--Sobic003G263300 Sobic008G009100--Sobic010G044700 Sobic001G401800 Sobic001G401800 Sobic008G009100--Sobic001G401800 Sobic008G009100--Sobic003G031100 Sobic008G183300 Sobic008G183300 Sobic008G009100--Sobic008G183300 Sobic008G009100--Sobic002G024400
Octagon: transcription factors


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