Gene annotation
Transcriptome id Sobic.010G160066.4,Sobic.010G160066.1,Sobic.010G160066.3,Sobic.010G160066.2
Synonym -
Functional annotation -
UniProt A0A1W0VTA5 , A0A1W0VTD7 , A0A1W0VTE7 , A0A1W0VTB3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G351800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@integral membrane protein, putative, expressed -
2 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
3 Sobic.001G459600 expressed protein -
4 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.009G098200 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.001G359500 cytochrome P450, putative, expressed -
7 Sobic.002G352800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@lactose permease-related, putative, expressed -
8 Sobic.002G058200 SAM dependent carboxyl methyltransferase, putative, expressed -
9 Sobic.003G010600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K13606: NOL, chlorophyll(ide) b reductase
10 Sobic.003G322700 expressed protein -
11 Sobic.001G517800 NIN, putative, expressed -
12 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.003G398100 antigen peptide transporter-like 1, chloroplast precursor, putative, expressed -
14 Sobic.003G317500 acyltransferase, putative, expressed K13513: LCLAT1, lysocardiolipin and lysophospholipid acyltransferase
15 Sobic.001G496100 - -
16 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.002G266000 ankyrin repeat-containing protein, putative, expressed -
18 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
19 Sobic.001G176501 - -
20 Sobic.004G260000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic010G160066 Sobic010G160066 Sobic001G351800 Sobic001G351800 Sobic010G160066--Sobic001G351800 Sobic009G012900 Sobic009G012900 Sobic010G160066--Sobic009G012900 Sobic001G459600 Sobic001G459600 Sobic010G160066--Sobic001G459600 Sobic004G034600 Sobic004G034600 Sobic010G160066--Sobic004G034600 Sobic009G098200 Sobic009G098200 Sobic010G160066--Sobic009G098200 Sobic001G359500 Sobic001G359500 Sobic010G160066--Sobic001G359500 Sobic002G352800 Sobic002G352800 Sobic010G160066--Sobic002G352800 Sobic002G058200 Sobic002G058200 Sobic010G160066--Sobic002G058200 Sobic003G010600 Sobic003G010600 Sobic010G160066--Sobic003G010600 Sobic001G351800--Sobic004G034600 Sobic003G322700 Sobic003G322700 Sobic001G351800--Sobic003G322700 Sobic002G266000 Sobic002G266000 Sobic001G351800--Sobic002G266000 Sobic001G351800--Sobic003G010600 Sobic004G124200 Sobic004G124200 Sobic001G351800--Sobic004G124200 Sobic009G034700 Sobic009G034700 Sobic001G351800--Sobic009G034700 Sobic010G192800 Sobic010G192800 Sobic001G351800--Sobic010G192800 Sobic004G225200 Sobic004G225200 Sobic001G351800--Sobic004G225200 Sobic001G282600 Sobic001G282600 Sobic001G351800--Sobic001G282600 Sobic009G012900--Sobic002G058200 Sobic009G029600 Sobic009G029600 Sobic009G012900--Sobic009G029600 Sobic002G011600 Sobic002G011600 Sobic009G012900--Sobic002G011600 Sobic003G216000 Sobic003G216000 Sobic009G012900--Sobic003G216000 Sobic006G030700 Sobic006G030700 Sobic009G012900--Sobic006G030700 Sobic010G170550 Sobic010G170550 Sobic009G012900--Sobic010G170550 Sobic002G215800 Sobic002G215800 Sobic009G012900--Sobic002G215800 Sobic009G012900--Sobic001G351800 Sobic002G098200 Sobic002G098200 Sobic009G012900--Sobic002G098200 Sobic001G517800 Sobic001G517800 Sobic001G459600--Sobic001G517800 Sobic001G000501 Sobic001G000501 Sobic001G459600--Sobic001G000501 Sobic001G459600--Sobic004G034600 Sobic001G000700 Sobic001G000700 Sobic001G459600--Sobic001G000700 Sobic002G418800 Sobic002G418800 Sobic001G459600--Sobic002G418800 Sobic008G084300 Sobic008G084300 Sobic001G459600--Sobic008G084300 Sobic008G166550 Sobic008G166550 Sobic001G459600--Sobic008G166550 Sobic001G223550 Sobic001G223550 Sobic001G459600--Sobic001G223550 Sobic005G133600 Sobic005G133600 Sobic001G459600--Sobic005G133600 Sobic005G149700 Sobic005G149700 Sobic004G034600--Sobic005G149700 Sobic002G249300 Sobic002G249300 Sobic004G034600--Sobic002G249300 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic004G034600--Sobic002G266000 Sobic004G034600--Sobic001G459600 Sobic004G034600--Sobic003G322700 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic009G098200--Sobic001G459600 Sobic003G317500 Sobic003G317500 Sobic009G098200--Sobic003G317500 Sobic009G098200--Sobic002G418800 Sobic004G175400 Sobic004G175400 Sobic009G098200--Sobic004G175400 Sobic009G098200--Sobic001G000501 Sobic009G098200--Sobic001G517800 Sobic009G098200--Sobic001G000700 Sobic010G057633 Sobic010G057633 Sobic009G098200--Sobic010G057633 Sobic009G248801 Sobic009G248801 Sobic009G098200--Sobic009G248801 Sobic006G181300 Sobic006G181300 Sobic001G359500--Sobic006G181300 Sobic002G338100 Sobic002G338100 Sobic001G359500--Sobic002G338100 Sobic001G504900 Sobic001G504900 Sobic001G359500--Sobic001G504900 Sobic009G207600 Sobic009G207600 Sobic001G359500--Sobic009G207600 Sobic001G176600 Sobic001G176600 Sobic001G359500--Sobic001G176600 Sobic009G226600 Sobic009G226600 Sobic001G359500--Sobic009G226600 Sobic007G034000 Sobic007G034000 Sobic001G359500--Sobic007G034000 Sobic008G074400 Sobic008G074400 Sobic001G359500--Sobic008G074400 Sobic010G205200 Sobic010G205200 Sobic001G359500--Sobic010G205200 Sobic003G257100 Sobic003G257100 Sobic002G352800--Sobic003G257100 Sobic006G204900 Sobic006G204900 Sobic002G352800--Sobic006G204900 Sobic003G320700 Sobic003G320700 Sobic002G352800--Sobic003G320700 Sobic009G193700 Sobic009G193700 Sobic002G352800--Sobic009G193700 Sobic009G211400 Sobic009G211400 Sobic002G352800--Sobic009G211400 Sobic002G352800--Sobic009G029600 Sobic002G292100 Sobic002G292100 Sobic002G352800--Sobic002G292100 Sobic010G107000 Sobic010G107000 Sobic002G352800--Sobic010G107000 Sobic006G199000 Sobic006G199000 Sobic002G352800--Sobic006G199000 Sobic003G251301 Sobic003G251301 Sobic002G058200--Sobic003G251301 Sobic002G058200--Sobic003G216000 Sobic002G058200--Sobic009G012900 Sobic005G043600 Sobic005G043600 Sobic002G058200--Sobic005G043600 Sobic002G058200--Sobic002G098200 Sobic008G175032 Sobic008G175032 Sobic002G058200--Sobic008G175032 Sobic002G058200--Sobic010G170550 Sobic002G058200--Sobic002G011600 Sobic002G100700 Sobic002G100700 Sobic002G058200--Sobic002G100700 Sobic001G325200 Sobic001G325200 Sobic003G010600--Sobic001G325200 Sobic009G226300 Sobic009G226300 Sobic003G010600--Sobic009G226300 Sobic004G260000 Sobic004G260000 Sobic003G010600--Sobic004G260000 Sobic009G054500 Sobic009G054500 Sobic003G010600--Sobic009G054500 Sobic003G010600--Sobic009G211400 Sobic008G062200 Sobic008G062200 Sobic003G010600--Sobic008G062200 Sobic006G100332 Sobic006G100332 Sobic003G010600--Sobic006G100332 Sobic005G018500 Sobic005G018500 Sobic003G010600--Sobic005G018500 Sobic003G219600 Sobic003G219600 Sobic003G010600--Sobic003G219600
Octagon: transcription factors


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