Gene annotation
Transcriptome id Sobic.002G058200.3,Sobic.002G058200.2
Synonym Sb02g004880, NAMT1
Functional annotation SAM dependent carboxyl methyltransferase, putative, expressed
UniProt A0A1W0W2K6 , A0A1W0W2J5
Pfam PF03492
Panther DB PTHR31009 PTHR31009:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT5G04370 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os02g48770.1,LOC_Os06g20630.1 : SAM dependent carboxyl methyltransferase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G251301 - -
2 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
3 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
4 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
5 Sobic.002G098200 expressed protein -
6 Sobic.008G175032 - -
7 Sobic.010G170550 - -
8 Sobic.002G011600 NB-ARC domain containing protein, expressed -
9 Sobic.002G100700 expressed protein -
10 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
11 Sobic.005G043900 protein kinase domain containing protein, expressed -
12 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
13 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
14 Sobic.004G304200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
15 Sobic.010G160066 - -
16 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
17 Sobic.006G030700 receptor kinase, putative, expressed -
18 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
19 Sobic.005G137400 - -
20 Sobic.K030700 - -


Gene co-expression network
sample Sobic002G058200 Sobic002G058200 Sobic003G251301 Sobic003G251301 Sobic002G058200--Sobic003G251301 Sobic003G216000 Sobic003G216000 Sobic002G058200--Sobic003G216000 Sobic009G012900 Sobic009G012900 Sobic002G058200--Sobic009G012900 Sobic005G043600 Sobic005G043600 Sobic002G058200--Sobic005G043600 Sobic002G098200 Sobic002G098200 Sobic002G058200--Sobic002G098200 Sobic008G175032 Sobic008G175032 Sobic002G058200--Sobic008G175032 Sobic010G170550 Sobic010G170550 Sobic002G058200--Sobic010G170550 Sobic002G011600 Sobic002G011600 Sobic002G058200--Sobic002G011600 Sobic002G100700 Sobic002G100700 Sobic002G058200--Sobic002G100700 Sobic003G251301--Sobic003G216000 Sobic003G251301--Sobic002G058200 Sobic003G251301--Sobic010G170550 Sobic004G006966 Sobic004G006966 Sobic003G251301--Sobic004G006966 Sobic009G061300 Sobic009G061300 Sobic003G251301--Sobic009G061300 Sobic005G151700 Sobic005G151700 Sobic003G216000--Sobic005G151700 Sobic004G304200 Sobic004G304200 Sobic003G216000--Sobic004G304200 Sobic003G216000--Sobic003G251301 Sobic003G216000--Sobic010G170550 Sobic001G483500 Sobic001G483500 Sobic003G216000--Sobic001G483500 Sobic003G216000--Sobic004G006966 Sobic009G012900--Sobic002G058200 Sobic009G029600 Sobic009G029600 Sobic009G012900--Sobic009G029600 Sobic009G012900--Sobic002G011600 Sobic009G012900--Sobic003G216000 Sobic006G030700 Sobic006G030700 Sobic009G012900--Sobic006G030700 Sobic009G012900--Sobic010G170550 Sobic002G215800 Sobic002G215800 Sobic009G012900--Sobic002G215800 Sobic001G351800 Sobic001G351800 Sobic009G012900--Sobic001G351800 Sobic009G012900--Sobic002G098200 Sobic007G198500 Sobic007G198500 Sobic005G043600--Sobic007G198500 Sobic005G043600--Sobic002G058200 Sobic005G043900 Sobic005G043900 Sobic005G043600--Sobic005G043900 Sobic005G043600--Sobic008G175032 Sobic005G043600--Sobic002G098200 Sobic008G048900 Sobic008G048900 Sobic005G043600--Sobic008G048900 Sobic003G203200 Sobic003G203200 Sobic005G043600--Sobic003G203200 Sobic001G359500 Sobic001G359500 Sobic005G043600--Sobic001G359500 Sobic001G247550 Sobic001G247550 Sobic005G043600--Sobic001G247550 Sobic002G098200--Sobic002G058200 Sobic002G098200--Sobic004G304200 Sobic002G098200--Sobic003G216000 Sobic005G137400 Sobic005G137400 Sobic002G098200--Sobic005G137400 Sobic002G098200--Sobic005G043600 Sobic002G098200--Sobic009G012900 Sobic002G098200--Sobic002G100700 Sobic004G169700 Sobic004G169700 Sobic002G098200--Sobic004G169700 Sobic002G098200--Sobic002G011600 Sobic008G175032--Sobic002G058200 Sobic008G175032--Sobic005G043600 Sobic008G175032--Sobic010G170550 Sobic008G175032--Sobic007G198500 Sobic008G175032--Sobic009G012900 Sobic008G175032--Sobic003G251301 Sobic008G175032--Sobic002G098200 Sobic008G175032--Sobic003G216000 Sobic008G175032--Sobic009G029600 Sobic003G269700 Sobic003G269700 Sobic010G170550--Sobic003G269700 Sobic010G170550--Sobic009G029600 Sobic004G255000 Sobic004G255000 Sobic010G170550--Sobic004G255000 Sobic003G219600 Sobic003G219600 Sobic010G170550--Sobic003G219600 Sobic010G170550--Sobic001G483500 Sobic010G170550--Sobic005G151700 Sobic010G170550--Sobic003G216000 Sobic006G100400 Sobic006G100400 Sobic010G170550--Sobic006G100400 Sobic001G251900 Sobic001G251900 Sobic010G170550--Sobic001G251900 Sobic002G011600--Sobic009G029600 Sobic001G280200 Sobic001G280200 Sobic002G011600--Sobic001G280200 Sobic002G011600--Sobic006G030700 Sobic002G011600--Sobic005G151700 Sobic007G187300 Sobic007G187300 Sobic002G011600--Sobic007G187300 Sobic005G018500 Sobic005G018500 Sobic002G011600--Sobic005G018500 Sobic001G249300 Sobic001G249300 Sobic002G011600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic002G011600--Sobic009G211400 Sobic010G098100 Sobic010G098100 Sobic002G011600--Sobic010G098100 Sobic002G100700--Sobic007G187300 Sobic002G100700--Sobic006G030700 Sobic006G100332 Sobic006G100332 Sobic002G100700--Sobic006G100332 Sobic009G226300 Sobic009G226300 Sobic002G100700--Sobic009G226300 Sobic002G100700--Sobic001G249300 Sobic002G100700--Sobic005G018500 Sobic002G100700--Sobic005G151700 Sobic009G054500 Sobic009G054500 Sobic002G100700--Sobic009G054500 Sobic004G260000 Sobic004G260000 Sobic002G100700--Sobic004G260000
Octagon: transcription factors


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