Gene annotation
Transcriptome id Sobic.008G175032.1
Synonym -
Functional annotation -
UniProt A0A1B6PE95
Pfam PF08263 PF13855 PF00069
Panther DB PTHR27000 PTHR27000:SF67
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os12g42520.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a032000
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G058200 SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
3 Sobic.010G170550 - -
4 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
5 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
6 Sobic.003G251301 - -
7 Sobic.002G098200 expressed protein -
8 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
9 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
10 Sobic.003G257100 YT521-B-like family domain containing protein, expressed -
11 Sobic.001G150650 - -
12 Sobic.004G304000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed -
13 Sobic.002G262300 lecithine cholesterol acyltransferase, putative, expressed -
14 Sobic.002G085300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
15 Sobic.005G043900 protein kinase domain containing protein, expressed -
16 Sobic.006G199000 pathogenesis-related Bet v I family protein, putative, expressed -
17 Sobic.004G255000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@aspartic proteinase nepenthesin-2 precursor, putative, expressed -
18 Sobic.003G269700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@SAM dependent carboxyl methyltransferase, putative, expressed -
19 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.001G359500 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic008G175032 Sobic008G175032 Sobic002G058200 Sobic002G058200 Sobic008G175032--Sobic002G058200 Sobic005G043600 Sobic005G043600 Sobic008G175032--Sobic005G043600 Sobic010G170550 Sobic010G170550 Sobic008G175032--Sobic010G170550 Sobic007G198500 Sobic007G198500 Sobic008G175032--Sobic007G198500 Sobic009G012900 Sobic009G012900 Sobic008G175032--Sobic009G012900 Sobic003G251301 Sobic003G251301 Sobic008G175032--Sobic003G251301 Sobic002G098200 Sobic002G098200 Sobic008G175032--Sobic002G098200 Sobic003G216000 Sobic003G216000 Sobic008G175032--Sobic003G216000 Sobic009G029600 Sobic009G029600 Sobic008G175032--Sobic009G029600 Sobic002G058200--Sobic003G251301 Sobic002G058200--Sobic003G216000 Sobic002G058200--Sobic009G012900 Sobic002G058200--Sobic005G043600 Sobic002G058200--Sobic002G098200 Sobic002G058200--Sobic008G175032 Sobic002G058200--Sobic010G170550 Sobic002G011600 Sobic002G011600 Sobic002G058200--Sobic002G011600 Sobic002G100700 Sobic002G100700 Sobic002G058200--Sobic002G100700 Sobic005G043600--Sobic007G198500 Sobic005G043600--Sobic002G058200 Sobic005G043900 Sobic005G043900 Sobic005G043600--Sobic005G043900 Sobic005G043600--Sobic008G175032 Sobic005G043600--Sobic002G098200 Sobic008G048900 Sobic008G048900 Sobic005G043600--Sobic008G048900 Sobic003G203200 Sobic003G203200 Sobic005G043600--Sobic003G203200 Sobic001G359500 Sobic001G359500 Sobic005G043600--Sobic001G359500 Sobic001G247550 Sobic001G247550 Sobic005G043600--Sobic001G247550 Sobic003G269700 Sobic003G269700 Sobic010G170550--Sobic003G269700 Sobic010G170550--Sobic009G029600 Sobic004G255000 Sobic004G255000 Sobic010G170550--Sobic004G255000 Sobic003G219600 Sobic003G219600 Sobic010G170550--Sobic003G219600 Sobic001G483500 Sobic001G483500 Sobic010G170550--Sobic001G483500 Sobic005G151700 Sobic005G151700 Sobic010G170550--Sobic005G151700 Sobic010G170550--Sobic003G216000 Sobic006G100400 Sobic006G100400 Sobic010G170550--Sobic006G100400 Sobic001G251900 Sobic001G251900 Sobic010G170550--Sobic001G251900 Sobic007G198500--Sobic005G043600 Sobic007G198500--Sobic008G048900 Sobic007G198500--Sobic008G175032 Sobic007G198500--Sobic001G359500 Sobic007G198500--Sobic001G247550 Sobic007G198500--Sobic003G203200 Sobic007G198500--Sobic005G043900 Sobic009G012900--Sobic002G058200 Sobic009G012900--Sobic009G029600 Sobic009G012900--Sobic002G011600 Sobic009G012900--Sobic003G216000 Sobic006G030700 Sobic006G030700 Sobic009G012900--Sobic006G030700 Sobic009G012900--Sobic010G170550 Sobic002G215800 Sobic002G215800 Sobic009G012900--Sobic002G215800 Sobic001G351800 Sobic001G351800 Sobic009G012900--Sobic001G351800 Sobic009G012900--Sobic002G098200 Sobic003G251301--Sobic003G216000 Sobic003G251301--Sobic002G058200 Sobic003G251301--Sobic010G170550 Sobic004G006966 Sobic004G006966 Sobic003G251301--Sobic004G006966 Sobic009G061300 Sobic009G061300 Sobic003G251301--Sobic009G061300 Sobic002G098200--Sobic002G058200 Sobic004G304200 Sobic004G304200 Sobic002G098200--Sobic004G304200 Sobic002G098200--Sobic003G216000 Sobic005G137400 Sobic005G137400 Sobic002G098200--Sobic005G137400 Sobic002G098200--Sobic005G043600 Sobic002G098200--Sobic009G012900 Sobic002G098200--Sobic002G100700 Sobic004G169700 Sobic004G169700 Sobic002G098200--Sobic004G169700 Sobic002G098200--Sobic002G011600 Sobic003G216000--Sobic005G151700 Sobic003G216000--Sobic004G304200 Sobic003G216000--Sobic003G251301 Sobic003G216000--Sobic010G170550 Sobic003G216000--Sobic001G483500 Sobic003G216000--Sobic004G006966 Sobic009G029600--Sobic004G255000 Sobic001G280200 Sobic001G280200 Sobic009G029600--Sobic001G280200 Sobic009G029600--Sobic003G219600 Sobic001G249300 Sobic001G249300 Sobic009G029600--Sobic001G249300 Sobic009G211400 Sobic009G211400 Sobic009G029600--Sobic009G211400 Sobic009G029600--Sobic006G030700 Sobic009G054500 Sobic009G054500 Sobic009G029600--Sobic009G054500 Sobic009G029600--Sobic002G215800 Sobic009G226300 Sobic009G226300 Sobic009G029600--Sobic009G226300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.