Gene annotation
Transcriptome id Sobic.003G251301.1
Synonym -
Functional annotation -
UniProt C5XG14
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
2 Sobic.002G058200 SAM dependent carboxyl methyltransferase, putative, expressed -
3 Sobic.010G170550 - -
4 Sobic.004G006966 - -
5 Sobic.004G006966 - -
6 Sobic.004G006966 - -
7 Sobic.004G006966 - -
8 Sobic.004G006966 - -
9 Sobic.009G061300 - -
10 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
11 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
12 Sobic.003G374150 - -
13 Sobic.008G175032 - -
14 Sobic.009G012900 leucine rich repeat protein, putative, expressed -
15 Sobic.002G098200 expressed protein -
16 Sobic.005G136800 only inducible by pathogen inoculation(PubMedID : 20529887)@"SbCHS2 encodes a typical CHS that synthesizes naringenin chalcone, which is necessary for the formation of different flavonoid metabolites."(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
17 Sobic.010G016800 - -
18 Sobic.002G182850 - -
19 Sobic.004G304200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
20 Sobic.005G137400 - -


Gene co-expression network
sample Sobic003G251301 Sobic003G251301 Sobic003G216000 Sobic003G216000 Sobic003G251301--Sobic003G216000 Sobic002G058200 Sobic002G058200 Sobic003G251301--Sobic002G058200 Sobic010G170550 Sobic010G170550 Sobic003G251301--Sobic010G170550 Sobic004G006966 Sobic004G006966 Sobic003G251301--Sobic004G006966 Sobic009G061300 Sobic009G061300 Sobic003G251301--Sobic009G061300 Sobic005G151700 Sobic005G151700 Sobic003G216000--Sobic005G151700 Sobic004G304200 Sobic004G304200 Sobic003G216000--Sobic004G304200 Sobic003G216000--Sobic003G251301 Sobic003G216000--Sobic010G170550 Sobic001G483500 Sobic001G483500 Sobic003G216000--Sobic001G483500 Sobic003G216000--Sobic004G006966 Sobic002G058200--Sobic003G251301 Sobic002G058200--Sobic003G216000 Sobic009G012900 Sobic009G012900 Sobic002G058200--Sobic009G012900 Sobic005G043600 Sobic005G043600 Sobic002G058200--Sobic005G043600 Sobic002G098200 Sobic002G098200 Sobic002G058200--Sobic002G098200 Sobic008G175032 Sobic008G175032 Sobic002G058200--Sobic008G175032 Sobic002G058200--Sobic010G170550 Sobic002G011600 Sobic002G011600 Sobic002G058200--Sobic002G011600 Sobic002G100700 Sobic002G100700 Sobic002G058200--Sobic002G100700 Sobic003G269700 Sobic003G269700 Sobic010G170550--Sobic003G269700 Sobic009G029600 Sobic009G029600 Sobic010G170550--Sobic009G029600 Sobic004G255000 Sobic004G255000 Sobic010G170550--Sobic004G255000 Sobic003G219600 Sobic003G219600 Sobic010G170550--Sobic003G219600 Sobic010G170550--Sobic001G483500 Sobic010G170550--Sobic005G151700 Sobic010G170550--Sobic003G216000 Sobic006G100400 Sobic006G100400 Sobic010G170550--Sobic006G100400 Sobic001G251900 Sobic001G251900 Sobic010G170550--Sobic001G251900 Sobic004G006966--Sobic004G006966 Sobic003G374150 Sobic003G374150 Sobic004G006966--Sobic003G374150 Sobic005G136800 Sobic005G136800 Sobic004G006966--Sobic005G136800 Sobic010G016800 Sobic010G016800 Sobic004G006966--Sobic010G016800 Sobic004G006966--Sobic001G483500 Sobic002G182850 Sobic002G182850 Sobic004G006966--Sobic002G182850 Sobic009G061300--Sobic004G006966 Sobic009G061300--Sobic001G483500 Sobic009G061300--Sobic003G374150 Sobic001G101400 Sobic001G101400 Sobic009G061300--Sobic001G101400 Sobic009G061300--Sobic005G136800
Octagon: transcription factors


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