Gene annotation
Transcriptome id Sobic.K030700.1,Sobic.K030700.2
Synonym
Functional annotation -
UniProt A0A120GUH3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G098100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./early senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
2 Sobic.001G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@OsSCP44 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
3 Sobic.009G114000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Os5bglu22 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
4 Sobic.001G162700 "phosphatidylinositol phosphatase, up-regulated under severe drought stress"(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@endonuclease/exonuclease/phosphatase family domain containing protein, expressed K01106: inositol-1,4,5-trisphosphate 5-phosphatase
5 Sobic.006G030700 receptor kinase, putative, expressed -
6 Sobic.007G187300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G249300 Cf2/Cf5 disease resistance protein, putative, expressed -
8 Sobic.006G214200 aminotransferase, putative, expressed K16871: 4-aminobutyrate---pyruvate transaminase
9 Sobic.001G212000 GEM, putative, expressed -
10 Sobic.001G483500 DUF567 domain containing protein, putative, expressed -
11 Sobic.010G098000 glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
12 Sobic.005G152100 aminotransferase, classes I and II, domain containing protein, expressed K00815: tyrosine aminotransferase
13 Sobic.002G011600 NB-ARC domain containing protein, expressed -
14 Sobic.002G420700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
15 Sobic.005G151700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@thiol protease SEN102 precursor, putative, expressed K16292: CEP, KDEL-tailed cysteine endopeptidase
16 Sobic.009G029600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutamate--cysteine ligase, chloroplast precursor, putative, expressed K01919: glutamate--cysteine ligase
17 Sobic.003G138200 expressed protein -
18 Sobic.009G226300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.006G091700 12-oxophytodienoate reductase, putative, expressed K05894: 12-oxophytodienoic acid reductase
20 Sobic.003G244600 similar to PRm 3(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase


Gene co-expression network
sample SobicK030700 SobicK030700 Sobic010G098100 Sobic010G098100 SobicK030700--Sobic010G098100 Sobic001G280200 Sobic001G280200 SobicK030700--Sobic001G280200 Sobic009G114000 Sobic009G114000 SobicK030700--Sobic009G114000 Sobic001G162700 Sobic001G162700 SobicK030700--Sobic001G162700 Sobic006G030700 Sobic006G030700 SobicK030700--Sobic006G030700 Sobic007G187300 Sobic007G187300 SobicK030700--Sobic007G187300 Sobic001G249300 Sobic001G249300 SobicK030700--Sobic001G249300 Sobic006G214200 Sobic006G214200 SobicK030700--Sobic006G214200 Sobic001G212000 Sobic001G212000 SobicK030700--Sobic001G212000 Sobic001G483500 Sobic001G483500 Sobic010G098100--Sobic001G483500 Sobic005G151700 Sobic005G151700 Sobic010G098100--Sobic005G151700 Sobic010G098100--Sobic001G212000 Sobic010G098100--Sobic001G280200 Sobic010G098100--Sobic001G249300 Sobic005G152100 Sobic005G152100 Sobic010G098100--Sobic005G152100 Sobic003G259200 Sobic003G259200 Sobic010G098100--Sobic003G259200 Sobic010G098100--Sobic007G187300 Sobic010G098100--Sobic001G162700 Sobic001G280200--Sobic001G249300 Sobic009G029600 Sobic009G029600 Sobic001G280200--Sobic009G029600 Sobic001G280200--Sobic006G030700 Sobic004G255000 Sobic004G255000 Sobic001G280200--Sobic004G255000 Sobic009G226300 Sobic009G226300 Sobic001G280200--Sobic009G226300 Sobic001G280200--Sobic007G187300 Sobic009G054500 Sobic009G054500 Sobic001G280200--Sobic009G054500 Sobic001G280200--Sobic001G162700 Sobic001G150600 Sobic001G150600 Sobic001G280200--Sobic001G150600 Sobic006G091700 Sobic006G091700 Sobic009G114000--Sobic006G091700 Sobic003G087200 Sobic003G087200 Sobic009G114000--Sobic003G087200 Sobic006G226400 Sobic006G226400 Sobic009G114000--Sobic006G226400 Sobic006G181300 Sobic006G181300 Sobic009G114000--Sobic006G181300 Sobic002G085300 Sobic002G085300 Sobic009G114000--Sobic002G085300 Sobic009G114000--Sobic001G150600 Sobic001G069900 Sobic001G069900 Sobic009G114000--Sobic001G069900 Sobic002G122800 Sobic002G122800 Sobic009G114000--Sobic002G122800 Sobic009G114000--Sobic006G030700 Sobic001G162700--Sobic001G280200 Sobic001G162700--Sobic001G249300 Sobic001G162700--Sobic010G098100 Sobic001G162700--Sobic009G029600 Sobic001G162700--Sobic003G259200 Sobic001G162700--Sobic004G255000 Sobic001G162700--Sobic001G483500 Sobic001G162700--Sobic006G030700 Sobic001G412700 Sobic001G412700 Sobic001G162700--Sobic001G412700 Sobic006G030700--Sobic007G187300 Sobic006G030700--Sobic009G226300 Sobic006G030700--Sobic001G249300 Sobic006G030700--Sobic001G150600 Sobic006G030700--Sobic001G280200 Sobic006G030700--Sobic009G054500 Sobic006G100332 Sobic006G100332 Sobic006G030700--Sobic006G100332 Sobic006G030700--Sobic009G029600 Sobic006G030700--Sobic003G087200 Sobic007G187300--Sobic009G226300 Sobic007G187300--Sobic006G030700 Sobic007G187300--Sobic001G249300 Sobic007G187300--Sobic009G054500 Sobic003G138200 Sobic003G138200 Sobic007G187300--Sobic003G138200 Sobic007G187300--Sobic006G100332 Sobic007G187300--Sobic001G280200 Sobic005G018500 Sobic005G018500 Sobic007G187300--Sobic005G018500 Sobic004G260000 Sobic004G260000 Sobic007G187300--Sobic004G260000 Sobic001G249300--Sobic001G280200 Sobic001G249300--Sobic009G226300 Sobic001G249300--Sobic009G054500 Sobic001G249300--Sobic007G187300 Sobic001G249300--Sobic003G138200 Sobic001G249300--Sobic006G030700 Sobic001G249300--Sobic004G255000 Sobic001G249300--Sobic003G259200 Sobic001G249300--Sobic009G029600 Sobic003G257100 Sobic003G257100 Sobic006G214200--Sobic003G257100 Sobic006G214200--Sobic009G029600 Sobic010G107000 Sobic010G107000 Sobic006G214200--Sobic010G107000 Sobic008G153400 Sobic008G153400 Sobic006G214200--Sobic008G153400 Sobic003G355600 Sobic003G355600 Sobic006G214200--Sobic003G355600 Sobic009G211400 Sobic009G211400 Sobic006G214200--Sobic009G211400 Sobic006G199000 Sobic006G199000 Sobic006G214200--Sobic006G199000 Sobic006G204900 Sobic006G204900 Sobic006G214200--Sobic006G204900 Sobic006G214200--Sobic003G138200 Sobic001G212000--Sobic010G098100 Sobic003G085300 Sobic003G085300 Sobic001G212000--Sobic003G085300 Sobic001G212000--Sobic005G152100 Sobic001G101400 Sobic001G101400 Sobic001G212000--Sobic001G101400 Sobic001G212000--Sobic001G483500 Sobic001G212000--Sobic001G412700 Sobic001G212000--Sobic005G151700 Sobic008G024400 Sobic008G024400 Sobic001G212000--Sobic008G024400 Sobic004G236600 Sobic004G236600 Sobic001G212000--Sobic004G236600
Octagon: transcription factors


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