Gene annotation
Transcriptome id Sobic.008G009100.1
Synonym
Functional annotation SAG20, putative, expressed
UniProt A0A1B6PAX9
Pfam PF04749 PF11204
Panther DB PTHR31045 PTHR31045:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05350 : PLAC8 family protein
RAP-DB (Rice) LOC_Os11g01842.1 : SAG20, putative, expressed
MaizeGDB (Corn) Zm00025a053667
Brachypodium KQJ92603
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G009200 SAG20, putative, expressed -
2 Sobic.001G469500 transporter family protein, putative, expressed -
3 Sobic.007G011700 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
4 Sobic.003G263300 Protein kinase domain containing protein, expressed -
5 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
6 Sobic.001G401800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@SAG20, putative, expressed -
7 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.008G183300 thaumatin, putative, expressed -
9 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
10 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
11 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
12 Sobic.008G162201 - K04730: interleukin-1 receptor-associated kinase 1
13 Sobic.007G058900 "SbCHS8, now retermed SbSTS1, encodes an enzyme with stilbene synthase activity, suggesting that sorghum accumulates stilbene-derived defense metabolites in addition to the well-characterized 3-deoxyanthocyanidin phytoalexins."(PubMedID : 15821144)@Metabolize resveratrol into its glycosides in the transgenicArabidopsis plants.(PubMedID : 18023075)@"an enzyme with stilbene synthase activity, a key role in the expression of resistance against C. sublineolum"(PubMedID : 15821144)@chalcone synthase, putative, expressed K00660: chalcone synthase
14 Sobic.006G246200 protein kinase, putative, expressed -
15 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
16 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
17 Sobic.007G158500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@patatin, putative, expressed -
18 Sobic.005G217200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
20 Sobic.009G241300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic008G009100 Sobic008G009100 Sobic008G009200 Sobic008G009200 Sobic008G009100--Sobic008G009200 Sobic001G469500 Sobic001G469500 Sobic008G009100--Sobic001G469500 Sobic007G011700 Sobic007G011700 Sobic008G009100--Sobic007G011700 Sobic003G263300 Sobic003G263300 Sobic008G009100--Sobic003G263300 Sobic010G044700 Sobic010G044700 Sobic008G009100--Sobic010G044700 Sobic001G401800 Sobic001G401800 Sobic008G009100--Sobic001G401800 Sobic003G031100 Sobic003G031100 Sobic008G009100--Sobic003G031100 Sobic008G183300 Sobic008G183300 Sobic008G009100--Sobic008G183300 Sobic002G024400 Sobic002G024400 Sobic008G009100--Sobic002G024400 Sobic008G009200--Sobic008G009100 Sobic008G009200--Sobic001G469500 Sobic008G009200--Sobic010G044700 Sobic005G171500 Sobic005G171500 Sobic008G009200--Sobic005G171500 Sobic001G354400 Sobic001G354400 Sobic008G009200--Sobic001G354400 Sobic005G217200 Sobic005G217200 Sobic008G009200--Sobic005G217200 Sobic003G244600 Sobic003G244600 Sobic008G009200--Sobic003G244600 Sobic002G035200 Sobic002G035200 Sobic008G009200--Sobic002G035200 Sobic002G122800 Sobic002G122800 Sobic008G009200--Sobic002G122800 Sobic007G135000 Sobic007G135000 Sobic001G469500--Sobic007G135000 Sobic001G469500--Sobic010G044700 Sobic003G363100 Sobic003G363100 Sobic001G469500--Sobic003G363100 Sobic010G192800 Sobic010G192800 Sobic001G469500--Sobic010G192800 Sobic003G022600 Sobic003G022600 Sobic001G469500--Sobic003G022600 Sobic003G039700 Sobic003G039700 Sobic001G469500--Sobic003G039700 Sobic003G097100 Sobic003G097100 Sobic001G469500--Sobic003G097100 Sobic002G130000 Sobic002G130000 Sobic001G469500--Sobic002G130000 Sobic001G469500--Sobic008G009200 Sobic009G000200 Sobic009G000200 Sobic007G011700--Sobic009G000200 Sobic006G061300 Sobic006G061300 Sobic007G011700--Sobic006G061300 Sobic010G203600 Sobic010G203600 Sobic007G011700--Sobic010G203600 Sobic008G189200 Sobic008G189200 Sobic007G011700--Sobic008G189200 Sobic001G386400 Sobic001G386400 Sobic007G011700--Sobic001G386400 Sobic003G316300 Sobic003G316300 Sobic007G011700--Sobic003G316300 Sobic009G235600 Sobic009G235600 Sobic007G011700--Sobic009G235600 Sobic007G011700--Sobic008G009100 Sobic007G011700--Sobic003G363100 Sobic001G272900 Sobic001G272900 Sobic003G263300--Sobic001G272900 Sobic003G263300--Sobic006G061300 Sobic010G098350 Sobic010G098350 Sobic003G263300--Sobic010G098350 Sobic005G210000 Sobic005G210000 Sobic003G263300--Sobic005G210000 Sobic003G070800 Sobic003G070800 Sobic003G263300--Sobic003G070800 Sobic009G034800 Sobic009G034800 Sobic003G263300--Sobic009G034800 Sobic003G263300--Sobic008G009100 Sobic001G387000 Sobic001G387000 Sobic003G263300--Sobic001G387000 Sobic007G158500 Sobic007G158500 Sobic003G263300--Sobic007G158500 Sobic010G044700--Sobic001G469500 Sobic009G241300 Sobic009G241300 Sobic010G044700--Sobic009G241300 Sobic010G044700--Sobic007G135000 Sobic010G044700--Sobic008G009200 Sobic009G241400 Sobic009G241400 Sobic010G044700--Sobic009G241400 Sobic010G044700--Sobic003G039700 Sobic010G044700--Sobic003G363100 Sobic007G001100 Sobic007G001100 Sobic010G044700--Sobic007G001100 Sobic009G012900 Sobic009G012900 Sobic010G044700--Sobic009G012900 Sobic001G401800--Sobic006G061300 Sobic001G401800--Sobic009G034800 Sobic001G401800--Sobic008G009100 Sobic001G401800--Sobic003G031100 Sobic001G237000 Sobic001G237000 Sobic001G401800--Sobic001G237000 Sobic007G074400 Sobic007G074400 Sobic001G401800--Sobic007G074400 Sobic001G454200 Sobic001G454200 Sobic001G401800--Sobic001G454200 Sobic001G401800--Sobic005G210000 Sobic005G171100 Sobic005G171100 Sobic001G401800--Sobic005G171100 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic003G031100--Sobic005G171100 Sobic003G031100--Sobic007G074400 Sobic003G031100--Sobic002G024400 Sobic009G073500 Sobic009G073500 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic004G052500 Sobic004G052500 Sobic008G183300--Sobic004G052500 Sobic001G259500 Sobic001G259500 Sobic008G183300--Sobic001G259500 Sobic005G082700 Sobic005G082700 Sobic008G183300--Sobic005G082700 Sobic006G113400 Sobic006G113400 Sobic008G183300--Sobic006G113400 Sobic006G246200 Sobic006G246200 Sobic008G183300--Sobic006G246200 Sobic001G145700 Sobic001G145700 Sobic002G024400--Sobic001G145700 Sobic010G230900 Sobic010G230900 Sobic002G024400--Sobic010G230900 Sobic002G024400--Sobic003G031100 Sobic002G024400--Sobic005G126200 Sobic005G169200 Sobic005G169200 Sobic002G024400--Sobic005G169200 Sobic010G230800 Sobic010G230800 Sobic002G024400--Sobic010G230800 Sobic006G076800 Sobic006G076800 Sobic002G024400--Sobic006G076800 Sobic002G024400--Sobic008G009200 Sobic002G024400--Sobic005G131700
Octagon: transcription factors


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