Gene annotation
Transcriptome id Sobic.001G401800.1,Sobic.001G401800.2
Synonym Sb01g038020
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
SAG20, putative, expressed
UniProt C5WNE8 , A0A1Z5S9Z0
Pfam PF04749 PF11204
Panther DB PTHR31045 PTHR31045:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G05350 : PLAC8 family protein
RAP-DB (Rice) LOC_Os03g18790.1 : SAG20, putative, expressed
MaizeGDB (Corn) Zm00025a002059 , Zm00025a043484
Brachypodium PNT77556 , PNT77557 , PNT77558 , PNT77559
Barley HORVU4Hr1G054940.2 , HORVU4Hr1G054940.1
Wheat TraesCS4B02G188300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G061300 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
2 Sobic.009G034800 WRKY5, expressed -
3 Sobic.008G009100 SAG20, putative, expressed -
4 Sobic.003G031100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.001G237000 lectin-like receptor kinase, putative, expressed -
6 Sobic.007G074400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
7 Sobic.001G454200 - -
8 Sobic.005G210000 expressed protein K11968: ariadne-1
9 Sobic.005G171100 - -
10 Sobic.008G009200 SAG20, putative, expressed -
11 Sobic.010G203600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.010G224600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR26 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
13 Sobic.003G263300 Protein kinase domain containing protein, expressed -
14 Sobic.003G321300 disease resistance protein RPS2, putative, expressed K13459: disease resistance protein RPS2
15 Sobic.007G011700 non-lysosomal glucosylceramidase, putative, expressed K17108: non-lysosomal glucosylceramidase
16 Sobic.002G301800 GRAS family transcription factor domain containing protein, expressed -
17 Sobic.010G097900 expressed protein -
18 Sobic.002G024400 OsSCP28 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
19 Sobic.006G246200 protein kinase, putative, expressed -
20 Sobic.001G146200 OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -


Gene co-expression network
sample Sobic001G401800 Sobic001G401800 Sobic006G061300 Sobic006G061300 Sobic001G401800--Sobic006G061300 Sobic009G034800 Sobic009G034800 Sobic001G401800--Sobic009G034800 Sobic008G009100 Sobic008G009100 Sobic001G401800--Sobic008G009100 Sobic003G031100 Sobic003G031100 Sobic001G401800--Sobic003G031100 Sobic001G237000 Sobic001G237000 Sobic001G401800--Sobic001G237000 Sobic007G074400 Sobic007G074400 Sobic001G401800--Sobic007G074400 Sobic001G454200 Sobic001G454200 Sobic001G401800--Sobic001G454200 Sobic005G210000 Sobic005G210000 Sobic001G401800--Sobic005G210000 Sobic005G171100 Sobic005G171100 Sobic001G401800--Sobic005G171100 Sobic010G203600 Sobic010G203600 Sobic006G061300--Sobic010G203600 Sobic009G000200 Sobic009G000200 Sobic006G061300--Sobic009G000200 Sobic007G011700 Sobic007G011700 Sobic006G061300--Sobic007G011700 Sobic003G016600 Sobic003G016600 Sobic006G061300--Sobic003G016600 Sobic006G061300--Sobic001G401800 Sobic003G321300 Sobic003G321300 Sobic006G061300--Sobic003G321300 Sobic006G061300--Sobic001G454200 Sobic003G263300 Sobic003G263300 Sobic006G061300--Sobic003G263300 Sobic002G301800 Sobic002G301800 Sobic006G061300--Sobic002G301800 Sobic002G130700 Sobic002G130700 Sobic009G034800--Sobic002G130700 Sobic002G027700 Sobic002G027700 Sobic009G034800--Sobic002G027700 Sobic004G174100 Sobic004G174100 Sobic009G034800--Sobic004G174100 Sobic007G158500 Sobic007G158500 Sobic009G034800--Sobic007G158500 Sobic005G103700 Sobic005G103700 Sobic009G034800--Sobic005G103700 Sobic001G319100 Sobic001G319100 Sobic009G034800--Sobic001G319100 Sobic002G216500 Sobic002G216500 Sobic009G034800--Sobic002G216500 Sobic004G174000 Sobic004G174000 Sobic009G034800--Sobic004G174000 Sobic002G067300 Sobic002G067300 Sobic009G034800--Sobic002G067300 Sobic008G009200 Sobic008G009200 Sobic008G009100--Sobic008G009200 Sobic001G469500 Sobic001G469500 Sobic008G009100--Sobic001G469500 Sobic008G009100--Sobic007G011700 Sobic008G009100--Sobic003G263300 Sobic010G044700 Sobic010G044700 Sobic008G009100--Sobic010G044700 Sobic008G009100--Sobic001G401800 Sobic008G009100--Sobic003G031100 Sobic008G183300 Sobic008G183300 Sobic008G009100--Sobic008G183300 Sobic002G024400 Sobic002G024400 Sobic008G009100--Sobic002G024400 Sobic001G018400 Sobic001G018400 Sobic003G031100--Sobic001G018400 Sobic005G126200 Sobic005G126200 Sobic003G031100--Sobic005G126200 Sobic003G031100--Sobic005G171100 Sobic003G031100--Sobic007G074400 Sobic003G031100--Sobic002G024400 Sobic009G073500 Sobic009G073500 Sobic003G031100--Sobic009G073500 Sobic007G058900 Sobic007G058900 Sobic003G031100--Sobic007G058900 Sobic005G131700 Sobic005G131700 Sobic003G031100--Sobic005G131700 Sobic008G146700 Sobic008G146700 Sobic003G031100--Sobic008G146700 Sobic005G061033 Sobic005G061033 Sobic001G237000--Sobic005G061033 Sobic001G237000--Sobic005G210000 Sobic008G190900 Sobic008G190900 Sobic001G237000--Sobic008G190900 Sobic001G298500 Sobic001G298500 Sobic001G237000--Sobic001G298500 Sobic009G236300 Sobic009G236300 Sobic001G237000--Sobic009G236300 Sobic001G237000--Sobic009G000200 Sobic005G061000 Sobic005G061000 Sobic001G237000--Sobic005G061000 Sobic002G225300 Sobic002G225300 Sobic001G237000--Sobic002G225300 Sobic001G237000--Sobic006G061300 Sobic007G074400--Sobic003G031100 Sobic005G217200 Sobic005G217200 Sobic007G074400--Sobic005G217200 Sobic007G074400--Sobic001G319100 Sobic004G237600 Sobic004G237600 Sobic007G074400--Sobic004G237600 Sobic006G174600 Sobic006G174600 Sobic007G074400--Sobic006G174600 Sobic008G142100 Sobic008G142100 Sobic007G074400--Sobic008G142100 Sobic001G318900 Sobic001G318900 Sobic007G074400--Sobic001G318900 Sobic007G074400--Sobic003G321300 Sobic005G229400 Sobic005G229400 Sobic007G074400--Sobic005G229400 Sobic003G276000 Sobic003G276000 Sobic001G454200--Sobic003G276000 Sobic008G090800 Sobic008G090800 Sobic001G454200--Sobic008G090800 Sobic003G363100 Sobic003G363100 Sobic001G454200--Sobic003G363100 Sobic010G162900 Sobic010G162900 Sobic001G454200--Sobic010G162900 Sobic010G018100 Sobic010G018100 Sobic001G454200--Sobic010G018100 Sobic001G454200--Sobic005G217200 Sobic001G454200--Sobic001G318900 Sobic004G182300 Sobic004G182300 Sobic001G454200--Sobic004G182300 Sobic001G146200 Sobic001G146200 Sobic001G454200--Sobic001G146200 Sobic003G070800 Sobic003G070800 Sobic005G210000--Sobic003G070800 Sobic010G123400 Sobic010G123400 Sobic005G210000--Sobic010G123400 Sobic005G210000--Sobic001G237000 Sobic004G174900 Sobic004G174900 Sobic005G210000--Sobic004G174900 Sobic005G210000--Sobic009G000200 Sobic009G138200 Sobic009G138200 Sobic005G210000--Sobic009G138200 Sobic003G370200 Sobic003G370200 Sobic005G210000--Sobic003G370200 Sobic003G233600 Sobic003G233600 Sobic005G210000--Sobic003G233600 Sobic001G381200 Sobic001G381200 Sobic005G210000--Sobic001G381200 Sobic005G171100--Sobic008G146700 Sobic010G045000 Sobic010G045000 Sobic005G171100--Sobic010G045000 Sobic003G291700 Sobic003G291700 Sobic005G171100--Sobic003G291700 Sobic006G246200 Sobic006G246200 Sobic005G171100--Sobic006G246200 Sobic006G231600 Sobic006G231600 Sobic005G171100--Sobic006G231600 Sobic002G209100 Sobic002G209100 Sobic005G171100--Sobic002G209100 Sobic005G082700 Sobic005G082700 Sobic005G171100--Sobic005G082700 Sobic006G113900 Sobic006G113900 Sobic005G171100--Sobic006G113900 Sobic001G136300 Sobic001G136300 Sobic005G171100--Sobic001G136300
Octagon: transcription factors


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