Gene annotation
Transcriptome id Sobic.008G162201.1
Synonym -
Functional annotation -
UniProt A0A1Z5R7Y2
Pfam PF07714
Panther DB PTHR27007 PTHR27007:SF6
NCBI CDD KOG0198; MEKK and related serine/threonine protein kinases
KEGG Orthology K04730; interleukin-1 receptor-associated kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10530 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os12g41540.1 : expressed protein
MaizeGDB (Corn) Zm00025a009242 , Zm00025a004650
Brachypodium KQJ85878 , KQJ85874 , KQJ85877 , PNT62348 , KQK16342 , KQJ85881 , KQJ81469 , KQJ85891 , KQJ85897
Barley HORVU5Hr1G012190.6 , HORVU5Hr1G012190.7 , HORVU5Hr1G012190.4 , HORVU5Hr1G012190.5 , HORVU5Hr1G012190.2 , HORVU5Hr1G012190.3 , HORVU5Hr1G012190.1 , HORVU5Hr1G012040.1 , HORVU5Hr1G012040.2 , HORVU2Hr1G125230.5 , HORVU2Hr1G125230.4 , HORVU2Hr1G125230.6 , HORVU2Hr1G125230.1 , HORVU2Hr1G125230.2 , HORVU5Hr1G012150.1
Wheat TraesCS2A02G571000 , TraesCS1A02G383900 , TraesCS1D02G392100 , TraesCS1D02G392100 , TraesCS5D02G062200 , TraesCS5B02G057700 , TraesCS4D02G325500 , TraesCS4B02G328400 , TraesCS5A02G500100 , TraesCS5A02G051700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G136300 nodulin family protein, putative, expressed -
2 Sobic.006G246200 protein kinase, putative, expressed -
3 Sobic.007G157100 gibberellin receptor GID1L2, putative, expressed -
4 Sobic.009G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
6 Sobic.009G241500 expressed protein -
7 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.005G133166 - -
9 Sobic.005G085500 - -
10 Sobic.009G241300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
11 Sobic.002G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein 1-deoxy-D-xylulose-5-phosphate synthase (Os)(PubMedID : 27208977)@transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
12 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
13 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
14 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
15 Sobic.008G181801 - -
16 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
17 Sobic.001G362001 Probable serine/threonineprotein kinase PBL15(PubMedID : 31721651) -
18 Sobic.004G181200 RING-H2 finger protein ATL3F, putative, expressed -
19 Sobic.001G469500 transporter family protein, putative, expressed -
20 Sobic.010G210700 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic008G162201 Sobic008G162201 Sobic001G136300 Sobic001G136300 Sobic008G162201--Sobic001G136300 Sobic006G246200 Sobic006G246200 Sobic008G162201--Sobic006G246200 Sobic007G157100 Sobic007G157100 Sobic008G162201--Sobic007G157100 Sobic009G241400 Sobic009G241400 Sobic008G162201--Sobic009G241400 Sobic006G168000 Sobic006G168000 Sobic008G162201--Sobic006G168000 Sobic009G241500 Sobic009G241500 Sobic008G162201--Sobic009G241500 Sobic005G082700 Sobic005G082700 Sobic008G162201--Sobic005G082700 Sobic005G133166 Sobic005G133166 Sobic008G162201--Sobic005G133166 Sobic005G085500 Sobic005G085500 Sobic008G162201--Sobic005G085500 Sobic001G136300--Sobic006G246200 Sobic001G136300--Sobic005G082700 Sobic001G136300--Sobic009G241500 Sobic006G113900 Sobic006G113900 Sobic001G136300--Sobic006G113900 Sobic001G136300--Sobic007G157100 Sobic001G381300 Sobic001G381300 Sobic001G136300--Sobic001G381300 Sobic001G146500 Sobic001G146500 Sobic001G136300--Sobic001G146500 Sobic005G226100 Sobic005G226100 Sobic001G136300--Sobic005G226100 Sobic001G136300--Sobic008G162201 Sobic006G246200--Sobic009G241500 Sobic006G246200--Sobic001G136300 Sobic006G246200--Sobic005G082700 Sobic001G362001 Sobic001G362001 Sobic006G246200--Sobic001G362001 Sobic006G246200--Sobic006G168000 Sobic004G181200 Sobic004G181200 Sobic006G246200--Sobic004G181200 Sobic009G121600 Sobic009G121600 Sobic006G246200--Sobic009G121600 Sobic006G246200--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic006G246200--Sobic002G241250 Sobic007G157100--Sobic001G136300 Sobic007G157100--Sobic005G133166 Sobic007G157100--Sobic006G246200 Sobic007G157100--Sobic009G241500 Sobic007G157100--Sobic008G162201 Sobic009G037200 Sobic009G037200 Sobic007G157100--Sobic009G037200 Sobic007G157100--Sobic005G082700 Sobic007G157100--Sobic006G168000 Sobic008G067500 Sobic008G067500 Sobic007G157100--Sobic008G067500 Sobic009G241300 Sobic009G241300 Sobic009G241400--Sobic009G241300 Sobic009G241400--Sobic006G168000 Sobic009G241400--Sobic008G162201 Sobic009G241400--Sobic001G136300 Sobic007G135000 Sobic007G135000 Sobic009G241400--Sobic007G135000 Sobic009G241400--Sobic005G082700 Sobic009G241400--Sobic006G246200 Sobic009G241400--Sobic009G241500 Sobic009G241400--Sobic005G133166 Sobic006G168000--Sobic006G246200 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic006G168000--Sobic005G133166 Sobic008G181801 Sobic008G181801 Sobic006G168000--Sobic008G181801 Sobic010G210700 Sobic010G210700 Sobic006G168000--Sobic010G210700 Sobic006G168000--Sobic001G136300 Sobic006G168000--Sobic009G241400 Sobic009G241500--Sobic008G181801 Sobic009G241500--Sobic005G082700 Sobic009G241500--Sobic005G226100 Sobic009G241500--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic009G241500--Sobic001G259500 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic005G082700--Sobic008G181801 Sobic005G082700--Sobic001G136300 Sobic005G082700--Sobic005G226100 Sobic005G082700--Sobic005G133166 Sobic004G052500 Sobic004G052500 Sobic005G082700--Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic005G133166--Sobic005G082700 SobicK044407 SobicK044407 Sobic005G133166--SobicK044407 Sobic005G133166--Sobic008G181801 Sobic001G012000 Sobic001G012000 Sobic005G133166--Sobic001G012000 Sobic005G133166--Sobic010G210700 Sobic002G173900 Sobic002G173900 Sobic005G133166--Sobic002G173900 Sobic005G133166--Sobic005G085500 Sobic006G045000 Sobic006G045000 Sobic005G133166--Sobic006G045000 Sobic005G133166--Sobic006G168000 Sobic002G041800 Sobic002G041800 Sobic005G085500--Sobic002G041800 Sobic005G085500--Sobic008G181801 Sobic005G085500--SobicK044407 Sobic004G195800 Sobic004G195800 Sobic005G085500--Sobic004G195800 Sobic002G209100 Sobic002G209100 Sobic005G085500--Sobic002G209100 Sobic005G085500--Sobic006G045000 Sobic005G085500--Sobic001G012000 Sobic002G423600 Sobic002G423600 Sobic005G085500--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic005G085500--Sobic004G078600
Octagon: transcription factors


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