Gene annotation
Transcriptome id Sobic.007G157100.1
Synonym Sb07g023070, ATCXE12, CXE12
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt A0A1Z5RA98
Pfam PF12695
Panther DB PTHR23024 PTHR23024:SF146
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48700 : carboxyesterase 13
RAP-DB (Rice) LOC_Os08g37010.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a031254 , Zm00025a047289 , Zm00025a005431 , Zm00025a047294
Brachypodium KQJ90539 , KQJ98622 , KQJ98621
Barley HORVU0Hr1G005140.1 , HORVU5Hr1G069040.1
Wheat TraesCS4A02G183300 , TraesCS4A02G183300 , TraesCS4D02G130000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G136300 nodulin family protein, putative, expressed -
2 Sobic.005G133166 - -
3 Sobic.006G246200 protein kinase, putative, expressed -
4 Sobic.009G241500 expressed protein -
5 Sobic.008G162201 - K04730: interleukin-1 receptor-associated kinase 1
6 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
7 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
8 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
9 Sobic.008G067500 protein kinase, putative, expressed -
10 Sobic.008G181801 - -
11 Sobic.005G085500 - -
12 Sobic.009G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.002G169200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK51 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.001G451700 cytochrome P450 protein, putative, expressed -
16 Sobic.001G340700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@EARLY flowering protein, putative, expressed -
17 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
18 Sobic.006G113900 heavy metal associated domain containing protein, expressed -
19 Sobic.007G055800 terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
20 Sobic.010G210700 NAD dependent epimerase/dehydratase family protein, putative, expressed -


Gene co-expression network
sample Sobic007G157100 Sobic007G157100 Sobic001G136300 Sobic001G136300 Sobic007G157100--Sobic001G136300 Sobic005G133166 Sobic005G133166 Sobic007G157100--Sobic005G133166 Sobic006G246200 Sobic006G246200 Sobic007G157100--Sobic006G246200 Sobic009G241500 Sobic009G241500 Sobic007G157100--Sobic009G241500 Sobic008G162201 Sobic008G162201 Sobic007G157100--Sobic008G162201 Sobic009G037200 Sobic009G037200 Sobic007G157100--Sobic009G037200 Sobic005G082700 Sobic005G082700 Sobic007G157100--Sobic005G082700 Sobic006G168000 Sobic006G168000 Sobic007G157100--Sobic006G168000 Sobic008G067500 Sobic008G067500 Sobic007G157100--Sobic008G067500 Sobic001G136300--Sobic006G246200 Sobic001G136300--Sobic005G082700 Sobic001G136300--Sobic009G241500 Sobic006G113900 Sobic006G113900 Sobic001G136300--Sobic006G113900 Sobic001G136300--Sobic007G157100 Sobic001G381300 Sobic001G381300 Sobic001G136300--Sobic001G381300 Sobic001G146500 Sobic001G146500 Sobic001G136300--Sobic001G146500 Sobic005G226100 Sobic005G226100 Sobic001G136300--Sobic005G226100 Sobic001G136300--Sobic008G162201 Sobic005G133166--Sobic005G082700 SobicK044407 SobicK044407 Sobic005G133166--SobicK044407 Sobic008G181801 Sobic008G181801 Sobic005G133166--Sobic008G181801 Sobic001G012000 Sobic001G012000 Sobic005G133166--Sobic001G012000 Sobic010G210700 Sobic010G210700 Sobic005G133166--Sobic010G210700 Sobic002G173900 Sobic002G173900 Sobic005G133166--Sobic002G173900 Sobic005G085500 Sobic005G085500 Sobic005G133166--Sobic005G085500 Sobic006G045000 Sobic006G045000 Sobic005G133166--Sobic006G045000 Sobic005G133166--Sobic006G168000 Sobic006G246200--Sobic009G241500 Sobic006G246200--Sobic001G136300 Sobic006G246200--Sobic005G082700 Sobic001G362001 Sobic001G362001 Sobic006G246200--Sobic001G362001 Sobic006G246200--Sobic006G168000 Sobic004G181200 Sobic004G181200 Sobic006G246200--Sobic004G181200 Sobic009G121600 Sobic009G121600 Sobic006G246200--Sobic009G121600 Sobic006G246200--Sobic005G226100 Sobic002G241250 Sobic002G241250 Sobic006G246200--Sobic002G241250 Sobic009G241500--Sobic008G181801 Sobic009G241500--Sobic005G082700 Sobic009G241500--Sobic005G226100 Sobic009G241500--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic009G241500--Sobic001G259500 Sobic008G162201--Sobic001G136300 Sobic008G162201--Sobic006G246200 Sobic008G162201--Sobic007G157100 Sobic009G241400 Sobic009G241400 Sobic008G162201--Sobic009G241400 Sobic008G162201--Sobic006G168000 Sobic008G162201--Sobic009G241500 Sobic008G162201--Sobic005G082700 Sobic008G162201--Sobic005G133166 Sobic008G162201--Sobic005G085500 Sobic010G193000 Sobic010G193000 Sobic009G037200--Sobic010G193000 Sobic009G037200--Sobic006G246200 Sobic002G257100 Sobic002G257100 Sobic009G037200--Sobic002G257100 Sobic005G203300 Sobic005G203300 Sobic009G037200--Sobic005G203300 Sobic005G217700 Sobic005G217700 Sobic009G037200--Sobic005G217700 Sobic009G037200--Sobic007G157100 Sobic009G037200--Sobic001G136300 Sobic009G037200--Sobic005G085500 Sobic007G089300 Sobic007G089300 Sobic009G037200--Sobic007G089300 Sobic005G082700--Sobic009G241500 Sobic005G082700--Sobic006G246200 Sobic005G082700--Sobic008G181801 Sobic005G082700--Sobic001G136300 Sobic005G082700--Sobic005G226100 Sobic005G082700--Sobic005G133166 Sobic004G052500 Sobic004G052500 Sobic005G082700--Sobic004G052500 Sobic008G183300 Sobic008G183300 Sobic005G082700--Sobic008G183300 Sobic003G037100 Sobic003G037100 Sobic005G082700--Sobic003G037100 Sobic006G168000--Sobic006G246200 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic006G168000--Sobic005G133166 Sobic006G168000--Sobic008G181801 Sobic006G168000--Sobic010G210700 Sobic006G168000--Sobic001G136300 Sobic006G168000--Sobic009G241400 Sobic008G067500--Sobic007G157100 Sobic002G366100 Sobic002G366100 Sobic008G067500--Sobic002G366100 Sobic003G366100 Sobic003G366100 Sobic008G067500--Sobic003G366100 Sobic009G255100 Sobic009G255100 Sobic008G067500--Sobic009G255100 Sobic006G060800 Sobic006G060800 Sobic008G067500--Sobic006G060800 Sobic002G041800 Sobic002G041800 Sobic008G067500--Sobic002G041800 Sobic004G099700 Sobic004G099700 Sobic008G067500--Sobic004G099700 Sobic008G067500--Sobic001G136300 Sobic008G067500--Sobic002G173900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.