Gene annotation
Transcriptome id Sobic.007G055800.1
Synonym
Functional annotation terpene synthase, putative, expressed
UniProt A0A1B6PFR5
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF7
NCBI CDD -
KEGG Orthology K15803; (-)-germacrene D synthase
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT3G29410 : Terpenoid cyclases/Protein prenyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g23530.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) Zm00025a055046 , Zm00025a055045 , Zm00025a055044
Brachypodium -
Barley -
Wheat TraesCS3D02G086300 , TraesCS3A02G086000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G181801 - -
2 Sobic.009G241500 expressed protein -
3 Sobic.005G226100 ZOS11-10 - C2H2 zinc finger protein, expressed -
4 Sobic.006G045000 drought-induced protein 1, putative, expressed -
5 Sobic.K044407 - -
6 Sobic.002G349400 - -
7 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
8 Sobic.005G085500 - -
9 Sobic.003G037100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
11 Sobic.001G381300 WRKY79, expressed -
12 Sobic.008G085350 - -
13 Sobic.002G269032 - -
14 Sobic.003G310200 ctr copper transporter family protein, putative, expressed K14686: SLC31A1, solute carrier family 31 (copper transporter), member 1
15 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
16 Sobic.007G157100 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
18 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
19 Sobic.001G259500 prenylated rab acceptor, putative, expressed -
20 Sobic.001G259500 prenylated rab acceptor, putative, expressed -


Gene co-expression network
sample Sobic007G055800 Sobic007G055800 Sobic008G181801 Sobic008G181801 Sobic007G055800--Sobic008G181801 Sobic009G241500 Sobic009G241500 Sobic007G055800--Sobic009G241500 Sobic005G226100 Sobic005G226100 Sobic007G055800--Sobic005G226100 Sobic006G045000 Sobic006G045000 Sobic007G055800--Sobic006G045000 SobicK044407 SobicK044407 Sobic007G055800--SobicK044407 Sobic002G349400 Sobic002G349400 Sobic007G055800--Sobic002G349400 Sobic001G012000 Sobic001G012000 Sobic007G055800--Sobic001G012000 Sobic005G085500 Sobic005G085500 Sobic007G055800--Sobic005G085500 Sobic003G037100 Sobic003G037100 Sobic007G055800--Sobic003G037100 Sobic008G181801--SobicK044407 Sobic008G181801--Sobic009G241500 Sobic008G181801--Sobic001G012000 Sobic008G181801--Sobic006G045000 Sobic008G181801--Sobic005G226100 Sobic008G181801--Sobic005G085500 Sobic003G310200 Sobic003G310200 Sobic008G181801--Sobic003G310200 Sobic005G082700 Sobic005G082700 Sobic008G181801--Sobic005G082700 Sobic008G181801--Sobic003G037100 Sobic009G241500--Sobic008G181801 Sobic009G241500--Sobic005G082700 Sobic009G241500--Sobic005G226100 Sobic006G246200 Sobic006G246200 Sobic009G241500--Sobic006G246200 Sobic001G259500 Sobic001G259500 Sobic009G241500--Sobic001G259500 Sobic005G226100--Sobic008G181801 Sobic005G226100--Sobic009G241500 Sobic005G226100--Sobic003G037100 Sobic001G381300 Sobic001G381300 Sobic005G226100--Sobic001G381300 Sobic002G269032 Sobic002G269032 Sobic005G226100--Sobic002G269032 Sobic009G121600 Sobic009G121600 Sobic005G226100--Sobic009G121600 Sobic005G226100--Sobic005G082700 Sobic005G226100--Sobic006G246200 Sobic005G226100--Sobic001G259500 Sobic006G045000--SobicK044407 Sobic006G045000--Sobic001G012000 Sobic001G056400 Sobic001G056400 Sobic006G045000--Sobic001G056400 Sobic006G045000--Sobic008G181801 Sobic002G423600 Sobic002G423600 Sobic006G045000--Sobic002G423600 Sobic003G378301 Sobic003G378301 Sobic006G045000--Sobic003G378301 Sobic005G182701 Sobic005G182701 Sobic006G045000--Sobic005G182701 Sobic001G201800 Sobic001G201800 Sobic006G045000--Sobic001G201800 Sobic004G217700 Sobic004G217700 Sobic006G045000--Sobic004G217700 SobicK044407--Sobic001G012000 SobicK044407--Sobic001G056400 SobicK044407--Sobic008G181801 SobicK044407--Sobic006G045000 SobicK044407--Sobic003G378301 SobicK044407--Sobic003G310200 SobicK044407--Sobic005G182701 SobicK044407--Sobic002G423600 Sobic007G055600 Sobic007G055600 SobicK044407--Sobic007G055600 Sobic002G349400--Sobic006G045000 Sobic004G209500 Sobic004G209500 Sobic002G349400--Sobic004G209500 Sobic001G315800 Sobic001G315800 Sobic002G349400--Sobic001G315800 Sobic002G349400--Sobic008G181801 Sobic002G349400--Sobic005G226100 Sobic002G349400--Sobic009G241500 Sobic009G216050 Sobic009G216050 Sobic002G349400--Sobic009G216050 Sobic002G253400 Sobic002G253400 Sobic002G349400--Sobic002G253400 Sobic001G320700 Sobic001G320700 Sobic002G349400--Sobic001G320700 Sobic001G012000--SobicK044407 Sobic001G012000--Sobic001G056400 Sobic001G012000--Sobic006G045000 Sobic001G012000--Sobic005G182701 Sobic009G115300 Sobic009G115300 Sobic001G012000--Sobic009G115300 Sobic001G012000--Sobic002G423600 Sobic001G012000--Sobic008G181801 Sobic001G012000--Sobic003G310200 Sobic009G115400 Sobic009G115400 Sobic001G012000--Sobic009G115400 Sobic002G041800 Sobic002G041800 Sobic005G085500--Sobic002G041800 Sobic005G085500--Sobic008G181801 Sobic005G085500--SobicK044407 Sobic004G195800 Sobic004G195800 Sobic005G085500--Sobic004G195800 Sobic002G209100 Sobic002G209100 Sobic005G085500--Sobic002G209100 Sobic005G085500--Sobic006G045000 Sobic005G085500--Sobic001G012000 Sobic005G085500--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic005G085500--Sobic004G078600 Sobic003G037100--Sobic005G226100 Sobic003G037100--Sobic002G269032 Sobic003G037100--Sobic008G181801 Sobic003G037100--Sobic009G241500 Sobic003G037100--Sobic001G259500
Octagon: transcription factors


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