Gene annotation
Transcriptome id Sobic.001G340700.1
Synonym ELF4-L4, Sb01g032750
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
EARLY flowering protein, putative, expressed
UniProt C5WWN3
Pfam PF07011
Panther DB PTHR33469 PTHR33469:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17455 : ELF4-like 4
RAP-DB (Rice) LOC_Os03g29680.1 : EARLY flowering protein, putative, expressed
MaizeGDB (Corn) Zm00025a052169 , Zm00025a002823 , Zm00025a029301
Brachypodium KQK21309 , KQK21308 , KQJ87731
Barley -
Wheat TraesCS4A02G146100
Populus -


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cDNA sequences
Sobic.001G340700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G133166 - -
2 Sobic.009G255100 hypersensitive-induced response protein, putative, expressed -
3 Sobic.001G145050 - -
4 Sobic.008G111300 transporter family protein, putative, expressed -
5 Sobic.005G045200 homeobox domain containing protein, expressed -
6 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
7 Sobic.008G085350 - -
8 Sobic.001G233200 - -
9 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
10 Sobic.003G378301 - K17362: acyl-coenzyme A thioesterase 13
11 Sobic.009G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -
13 Sobic.007G157100 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.005G082700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
15 Sobic.003G248901 - -
16 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
17 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
18 Sobic.001G320700 prephenate dehydratase domain containing protein, expressed -
19 Sobic.001G136300 nodulin family protein, putative, expressed -
20 Sobic.008G181801 - -


Gene co-expression network
sample Sobic001G340700 Sobic001G340700 Sobic005G133166 Sobic005G133166 Sobic001G340700--Sobic005G133166 Sobic009G255100 Sobic009G255100 Sobic001G340700--Sobic009G255100 Sobic001G145050 Sobic001G145050 Sobic001G340700--Sobic001G145050 Sobic008G111300 Sobic008G111300 Sobic001G340700--Sobic008G111300 Sobic005G045200 Sobic005G045200 Sobic001G340700--Sobic005G045200 Sobic006G168000 Sobic006G168000 Sobic001G340700--Sobic006G168000 Sobic008G085350 Sobic008G085350 Sobic001G340700--Sobic008G085350 Sobic001G233200 Sobic001G233200 Sobic001G340700--Sobic001G233200 Sobic002G271600 Sobic002G271600 Sobic001G340700--Sobic002G271600 Sobic005G082700 Sobic005G082700 Sobic005G133166--Sobic005G082700 SobicK044407 SobicK044407 Sobic005G133166--SobicK044407 Sobic008G181801 Sobic008G181801 Sobic005G133166--Sobic008G181801 Sobic001G012000 Sobic001G012000 Sobic005G133166--Sobic001G012000 Sobic010G210700 Sobic010G210700 Sobic005G133166--Sobic010G210700 Sobic002G173900 Sobic002G173900 Sobic005G133166--Sobic002G173900 Sobic005G085500 Sobic005G085500 Sobic005G133166--Sobic005G085500 Sobic006G045000 Sobic006G045000 Sobic005G133166--Sobic006G045000 Sobic005G133166--Sobic006G168000 Sobic009G255100--Sobic001G145050 Sobic002G366100 Sobic002G366100 Sobic009G255100--Sobic002G366100 Sobic002G041800 Sobic002G041800 Sobic009G255100--Sobic002G041800 Sobic006G060800 Sobic006G060800 Sobic009G255100--Sobic006G060800 Sobic009G255100--Sobic001G340700 Sobic001G005500 Sobic001G005500 Sobic009G255100--Sobic001G005500 Sobic009G255100--Sobic002G271600 Sobic002G195700 Sobic002G195700 Sobic009G255100--Sobic002G195700 Sobic002G265400 Sobic002G265400 Sobic009G255100--Sobic002G265400 Sobic001G145050--Sobic009G255100 Sobic001G145050--Sobic002G041800 Sobic001G145050--Sobic002G366100 Sobic001G145050--Sobic006G060800 Sobic003G402200 Sobic003G402200 Sobic001G145050--Sobic003G402200 Sobic004G078600 Sobic004G078600 Sobic001G145050--Sobic004G078600 Sobic001G145050--Sobic005G085500 Sobic001G145050--Sobic002G271600 Sobic002G209100 Sobic002G209100 Sobic001G145050--Sobic002G209100 Sobic004G068700 Sobic004G068700 Sobic008G111300--Sobic004G068700 Sobic003G214000 Sobic003G214000 Sobic008G111300--Sobic003G214000 Sobic001G179100 Sobic001G179100 Sobic008G111300--Sobic001G179100 Sobic008G111300--Sobic004G078600 Sobic001G201800 Sobic001G201800 Sobic008G111300--Sobic001G201800 Sobic003G361900 Sobic003G361900 Sobic008G111300--Sobic003G361900 Sobic001G320700 Sobic001G320700 Sobic008G111300--Sobic001G320700 Sobic004G209500 Sobic004G209500 Sobic008G111300--Sobic004G209500 Sobic008G111300--Sobic003G402200 Sobic003G378301 Sobic003G378301 Sobic005G045200--Sobic003G378301 Sobic004G068800 Sobic004G068800 Sobic005G045200--Sobic004G068800 Sobic005G045200--Sobic006G060800 Sobic010G130800 Sobic010G130800 Sobic005G045200--Sobic010G130800 Sobic004G217700 Sobic004G217700 Sobic005G045200--Sobic004G217700 Sobic003G366100 Sobic003G366100 Sobic005G045200--Sobic003G366100 Sobic005G045200--Sobic001G145050 Sobic007G025900 Sobic007G025900 Sobic005G045200--Sobic007G025900 Sobic003G410900 Sobic003G410900 Sobic005G045200--Sobic003G410900 Sobic006G246200 Sobic006G246200 Sobic006G168000--Sobic006G246200 Sobic009G241500 Sobic009G241500 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic006G168000--Sobic005G133166 Sobic006G168000--Sobic008G181801 Sobic006G168000--Sobic010G210700 Sobic001G136300 Sobic001G136300 Sobic006G168000--Sobic001G136300 Sobic009G241400 Sobic009G241400 Sobic006G168000--Sobic009G241400 Sobic008G085350--SobicK044407 Sobic008G085350--Sobic003G378301 Sobic008G085350--Sobic006G045000 Sobic008G085350--Sobic001G012000 Sobic001G056400 Sobic001G056400 Sobic008G085350--Sobic001G056400 Sobic008G085350--Sobic005G133166 Sobic008G085350--Sobic008G181801 Sobic002G423600 Sobic002G423600 Sobic008G085350--Sobic002G423600 Sobic008G085350--Sobic001G233200 Sobic001G233200--Sobic008G085350 Sobic001G233200--Sobic006G045000 Sobic001G233200--Sobic001G201800 Sobic001G233200--Sobic004G078600 Sobic001G233200--Sobic005G133166 Sobic001G233200--Sobic002G423600 Sobic001G233200--Sobic004G209500 Sobic001G233200--Sobic001G012000 Sobic001G233200--SobicK044407 Sobic007G014600 Sobic007G014600 Sobic002G271600--Sobic007G014600 Sobic002G271600--Sobic002G209100 Sobic002G271600--Sobic002G041800 Sobic002G271600--Sobic004G217700 Sobic002G271600--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic002G271600--Sobic009G205600 Sobic006G053700 Sobic006G053700 Sobic002G271600--Sobic006G053700 Sobic004G195800 Sobic004G195800 Sobic002G271600--Sobic004G195800 Sobic002G271600--Sobic002G366100
Octagon: transcription factors


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