Gene annotation
Transcriptome id Sobic.009G241300.2
Synonym Sb09g029300
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
expressed protein
UniProt A0A1Z5R3X1
Pfam -
Panther DB PTHR37210 PTHR37210:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25625 : -
RAP-DB (Rice) LOC_Os05g49940.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
2 Sobic.007G135000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
3 Sobic.003G097100 receptor kinase ORK10, putative, expressed -
4 Sobic.010G044700 leucine zipper protein-like, putative, expressed -
5 Sobic.008G162201 - K04730: interleukin-1 receptor-associated kinase 1
6 Sobic.001G469500 transporter family protein, putative, expressed -
7 Sobic.006G168000 AP2 domain containing protein, expressed K09286: EREBP-like factor
8 Sobic.007G001100 DTA2, putative, expressed -
9 Sobic.002G064500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein 1-deoxy-D-xylulose-5-phosphate synthase (Os)(PubMedID : 27208977)@transketolase, putative, expressed K01662: 1-deoxy-D-xylulose-5-phosphate synthase
10 Sobic.007G089101 - -
11 Sobic.003G039700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
12 Sobic.003G363100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialyltransferase family domain containing protein, expressed -
13 Sobic.001G320200 phospholipase D, putative, expressed K01115: phospholipase D1/2
14 Sobic.010G210700 NAD dependent epimerase/dehydratase family protein, putative, expressed -
15 Sobic.002G177300 cytochrome P450, putative, expressed -
16 Sobic.005G133166 - -
17 Sobic.010G018100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
18 Sobic.010G137300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cysteine-rich receptor-like protein kinase 10 precursor, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
19 Sobic.001G305800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@U-box domain containing protein, expressed -
20 Sobic.001G340700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@EARLY flowering protein, putative, expressed -


Gene co-expression network
sample Sobic009G241300 Sobic009G241300 Sobic009G241400 Sobic009G241400 Sobic009G241300--Sobic009G241400 Sobic007G135000 Sobic007G135000 Sobic009G241300--Sobic007G135000 Sobic003G097100 Sobic003G097100 Sobic009G241300--Sobic003G097100 Sobic010G044700 Sobic010G044700 Sobic009G241300--Sobic010G044700 Sobic008G162201 Sobic008G162201 Sobic009G241300--Sobic008G162201 Sobic001G469500 Sobic001G469500 Sobic009G241300--Sobic001G469500 Sobic006G168000 Sobic006G168000 Sobic009G241300--Sobic006G168000 Sobic007G001100 Sobic007G001100 Sobic009G241300--Sobic007G001100 Sobic002G064500 Sobic002G064500 Sobic009G241300--Sobic002G064500 Sobic009G241400--Sobic009G241300 Sobic009G241400--Sobic006G168000 Sobic009G241400--Sobic008G162201 Sobic001G136300 Sobic001G136300 Sobic009G241400--Sobic001G136300 Sobic009G241400--Sobic007G135000 Sobic005G082700 Sobic005G082700 Sobic009G241400--Sobic005G082700 Sobic006G246200 Sobic006G246200 Sobic009G241400--Sobic006G246200 Sobic009G241500 Sobic009G241500 Sobic009G241400--Sobic009G241500 Sobic005G133166 Sobic005G133166 Sobic009G241400--Sobic005G133166 Sobic007G135000--Sobic003G097100 Sobic007G135000--Sobic009G241300 Sobic007G135000--Sobic001G469500 Sobic003G022600 Sobic003G022600 Sobic007G135000--Sobic003G022600 Sobic003G039700 Sobic003G039700 Sobic007G135000--Sobic003G039700 Sobic007G135000--Sobic009G241400 Sobic003G363100 Sobic003G363100 Sobic007G135000--Sobic003G363100 Sobic006G242000 Sobic006G242000 Sobic007G135000--Sobic006G242000 Sobic010G192800 Sobic010G192800 Sobic007G135000--Sobic010G192800 Sobic003G097100--Sobic007G135000 Sobic003G097100--Sobic006G242000 Sobic003G097100--Sobic009G241300 Sobic006G028100 Sobic006G028100 Sobic003G097100--Sobic006G028100 Sobic001G320200 Sobic001G320200 Sobic003G097100--Sobic001G320200 Sobic003G097100--Sobic009G241400 Sobic003G097100--Sobic003G022600 Sobic003G097100--Sobic001G469500 Sobic002G130700 Sobic002G130700 Sobic003G097100--Sobic002G130700 Sobic010G044700--Sobic001G469500 Sobic010G044700--Sobic009G241300 Sobic010G044700--Sobic007G135000 Sobic008G009200 Sobic008G009200 Sobic010G044700--Sobic008G009200 Sobic010G044700--Sobic009G241400 Sobic010G044700--Sobic003G039700 Sobic010G044700--Sobic003G363100 Sobic010G044700--Sobic007G001100 Sobic009G012900 Sobic009G012900 Sobic010G044700--Sobic009G012900 Sobic008G162201--Sobic001G136300 Sobic008G162201--Sobic006G246200 Sobic007G157100 Sobic007G157100 Sobic008G162201--Sobic007G157100 Sobic008G162201--Sobic009G241400 Sobic008G162201--Sobic006G168000 Sobic008G162201--Sobic009G241500 Sobic008G162201--Sobic005G082700 Sobic008G162201--Sobic005G133166 Sobic005G085500 Sobic005G085500 Sobic008G162201--Sobic005G085500 Sobic001G469500--Sobic007G135000 Sobic001G469500--Sobic010G044700 Sobic001G469500--Sobic003G363100 Sobic001G469500--Sobic010G192800 Sobic001G469500--Sobic003G022600 Sobic001G469500--Sobic003G039700 Sobic001G469500--Sobic003G097100 Sobic002G130000 Sobic002G130000 Sobic001G469500--Sobic002G130000 Sobic001G469500--Sobic008G009200 Sobic006G168000--Sobic006G246200 Sobic006G168000--Sobic009G241500 Sobic006G168000--Sobic005G082700 Sobic004G220600 Sobic004G220600 Sobic006G168000--Sobic004G220600 Sobic006G168000--Sobic005G133166 Sobic008G181801 Sobic008G181801 Sobic006G168000--Sobic008G181801 Sobic010G210700 Sobic010G210700 Sobic006G168000--Sobic010G210700 Sobic006G168000--Sobic001G136300 Sobic006G168000--Sobic009G241400 Sobic008G164800 Sobic008G164800 Sobic007G001100--Sobic008G164800 Sobic007G001100--Sobic007G135000 Sobic001G351800 Sobic001G351800 Sobic007G001100--Sobic001G351800 Sobic007G001100--Sobic009G241300 Sobic005G178100 Sobic005G178100 Sobic007G001100--Sobic005G178100 Sobic007G001100--Sobic010G192800 Sobic004G320600 Sobic004G320600 Sobic007G001100--Sobic004G320600 Sobic007G001100--Sobic010G044700 Sobic007G035000 Sobic007G035000 Sobic007G001100--Sobic007G035000 Sobic002G064500--Sobic009G241400 Sobic002G064500--Sobic008G162201 Sobic002G064500--Sobic009G241300 Sobic005G226100 Sobic005G226100 Sobic002G064500--Sobic005G226100 Sobic006G045000 Sobic006G045000 Sobic002G064500--Sobic006G045000 Sobic002G064500--Sobic001G136300 Sobic001G012000 Sobic001G012000 Sobic002G064500--Sobic001G012000 Sobic002G064500--Sobic008G181801 SobicK044407 SobicK044407 Sobic002G064500--SobicK044407
Octagon: transcription factors


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